prot_Ecto-sp13_S_contig14576.3510.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14576.3510.1
Unique Name	prot_Ecto-sp13_S_contig14576.3510.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	457

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: A0A6H5JFS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFS7_9PHAE)

HSP 1 Score: 558 bits (1437), Expect = 1.120e-182
Identity = 309/327 (94.50%), Postives = 310/327 (94.80%), Query Frame = 0

Query:    2 GSAGGALSSSGGLHAVGIDALPSSASLPPASSVQQTRPKSPRQLLQQQPSPHLLLQQPSQQQLREXXXXXXXXXXXXXXXXDQGNRGDQDAADXXDDDTFEADKEYRATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARNQHKMMGRPRAVFKSFTRAKQPTRVPIRPARQQPVAPVRIAPSVSAVGAMHPTAALSPQ 328
            GSAG  L SSGGLHAVGIDALPSSASLPPASSVQQTRPKSPRQLLQQQPSPHLLLQQPSQQQLREXXXXXXXXXXXXXXXX            XXDDD FEADKEYRATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRH PWTFAENAALKKAANAYNGRQIKWASIVKDVPEL+GRSPDAARNQHKMMGRPRAVFKSFTRAKQPTRVPIRPARQQPVAPVRIAPSVSAVGAMHPTAALSPQ
Sbjct:   14 GSAGETLFSSGGLHAVGIDALPSSASLPPASSVQQTRPKSPRQLLQQQPSPHLLLQQPSQQQLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDHFEADKEYRATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHLPWTFAENAALKKAANAYNGRQIKWASIVKDVPELIGRSPDAARNQHKMMGRPRAVFKSFTRAKQPTRVPIRPARQQPVAPVRIAPSVSAVGAMHPTAALSPQ 340

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: D8LIU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU3_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.540e-112
Identity = 166/172 (96.51%), Postives = 168/172 (97.67%), Query Frame = 0

Query:   91 DAADXXDDDTFEADKEYRATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVG 262
            DAA XX   +FEADKEYRATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPEL+G
Sbjct:  275 DAAXXXXXXSFEADKEYRATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELIG 446

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: A0A7S3PFE6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFE6_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.900e-15
Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 0

Query:  153 CRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKE-----DSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARNQ 271
            C  RWT+V  P + KG WS+ ED +L + VNE  K      D    W  ++   +KG R++KQCR R+MNHLDPGL+   W+  E+ AL + A+AY     KWA I +++P   GR+ +  +N+
Sbjct:  173 CYQRWTRVLAPGLKKGKWSESEDMMLLEVVNEYLKVIDSSGDKTINWKLVASK-YKG-RSAKQCRERWMNHLDPGLKKSEWSVEEDFALLQFASAYPK---KWARIAREIP---GRTENMVKNR 288

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: A0A6J0P9K7_RAPSA (uncharacterized protein LOC108863442 isoform X1 n=2 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0P9K7_RAPSA)

HSP 1 Score: 87.4 bits (215), Expect = 7.010e-15
Identity = 57/158 (36.08%), Postives = 77/158 (48.73%), Query Frame = 0

Query:  113 WSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARN 270
            W+  E + L E           +VAE         K+  QC  RW KV +P++TKG W+Q EDE +     E+ K   P  W  IS++   G R  KQCR R+ NHL+PG+    WT  E   L KA   Y     KWA I K +P   GR+ ++ +N
Sbjct:   54 WTTEEDETLREAVHRFKAKSWKKVAEFF-----THKSEVQCMHRWQKVLDPNLTKGPWTQQEDETIV----ELVKRYGPAKWAMISDS-LPG-RIGKQCRERWYNHLNPGINKEAWTIEEELVLLKAHLTYGN---KWAEIAKVLP---GRTDNSIKN 194

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: D7M7S2_ARALL (Myb domain protein 3R-5 n=2 Tax=Camelineae TaxID=980083 RepID=D7M7S2_ARALL)

HSP 1 Score: 87.0 bits (214), Expect = 1.230e-14
Identity = 56/163 (34.36%), Postives = 80/163 (49.08%), Query Frame = 0

Query:  108 RATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARN 270
            RA   W+  E + L             ++AE   + T +     QC  RW KV NP + KG W+Q ED+ +     E+ K+  P  W  I+++   G R  KQCR R+ NHL+PG+R   WT  E +AL  +   Y     KWA I K +P   GR+ +A +N
Sbjct:   73 RAKGGWTPEEDETLRRAVDKYKGKRWKKIAEFFPERTEV-----QCLHRWQKVLNPELVKGPWTQEEDDKIV----ELVKKYGPAKWSVIAKS-LPG-RIGKQCRERWHNHLNPGIRKDAWTIEEESALMNSHRMYGN---KWAEIAKVLP---GRTDNAIKN 218

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: MB3R5_ARATH (Transcription factor MYB3R-5 n=5 Tax=Arabidopsis thaliana TaxID=3702 RepID=MB3R5_ARATH)

HSP 1 Score: 86.7 bits (213), Expect = 1.670e-14
Identity = 56/163 (34.36%), Postives = 80/163 (49.08%), Query Frame = 0

Query:  108 RATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARN 270
            RA   W+  E + L             ++AE   + T +     QC  RW KV NP + KG W+Q ED+ +     E+ K+  P  W  I+++   G R  KQCR R+ NHL+PG+R   WT  E +AL  +   Y     KWA I K +P   GR+ +A +N
Sbjct:   73 RAKGGWTPEEDETLRRAVEKYKGKRWKKIAEFFPERTEV-----QCLHRWQKVLNPELVKGPWTQEEDDKIV----ELVKKYGPAKWSVIAKS-LPG-RIGKQCRERWHNHLNPGIRKDAWTVEEESALMNSHRMYGN---KWAEIAKVLP---GRTDNAIKN 218

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: A0A565CH28_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CH28_9BRAS)

HSP 1 Score: 85.9 bits (211), Expect = 2.930e-14
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 0

Query:  146 IRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARN 270
            + +T  QC  RW KV NP + KG W+Q ED+ +     E+ K+  P  W  I+ +   G R  KQCR R+ NHL+PG+R   WT  E +AL    NA+     KWA I K +P   GR+ +A +N
Sbjct:  103 LDRTEVQCLHRWQKVLNPELVKGPWTQEEDDKI----TELVKKYGPAKWSVIASS-LPG-RIGKQCRERWHNHLNPGIRKDAWTVEEESALM---NAHRMHGNKWAEIAKVLP---GRTDNAIKN 215

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: A0A078HSU7_BRANA (BnaA10g27190D protein n=16 Tax=Brassica TaxID=3705 RepID=A0A078HSU7_BRANA)

HSP 1 Score: 85.1 bits (209), Expect = 4.910e-14
Identity = 56/163 (34.36%), Postives = 80/163 (49.08%), Query Frame = 0

Query:  108 RATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARN 270
            RA   W+  E + L +           ++AE   + T +     QC  RW KV NP + KG W+Q ED ++     E+ K+  P  W  I+++   G R  KQCR R+ NHL+PG+R   WT  E  AL  A   +     KWA I K +P   GR+ +A +N
Sbjct:   71 RAKGGWTPEEDETLRQAVDKYKGKRWKKIAEYFPERTEV-----QCLHRWQKVLNPELIKGTWTQEEDGIIV----ELVKKYGPAKWSLIAKS-LPG-RIGKQCRERWHNHLNPGIRKDAWTTEEETALINAQRTHGN---KWAEIAKVLP---GRTDNAIKN 216

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: UPI0006232864 (myb protein isoform X1 n=4 Tax=Linepithema humile TaxID=83485 RepID=UPI0006232864)

HSP 1 Score: 85.5 bits (210), Expect = 5.480e-14
Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 0

Query:  113 WSVRELQLLWELKTNQPDLPPNRVAELMWKATGIR---KTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARN 270
            W+  E  LL +L +N   L  +    L W         ++  QC+ RW KV NP + KG W++ EDE + + V++      P  W  I+    KG R  KQCR R+ NHL+PG++   WT AE+  + +A   Y  +   WA I K +P   GR+ +A +N
Sbjct:  165 WTKEEDALLKQLVSNAEQLGTS----LRWDVISSHFPDRSDVQCQQRWAKVVNPELVKGPWTKEEDEKVVELVDKY----GPKKWTLIARH-LKG-RIGKQCRERWHNHLNPGIKKTAWTDAEDKIIVEAHRKYGNQ---WAKIAKLLP---GRTDNAIKN 309

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BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Match: A0A0C9R173_9HYME (MYB_0 protein n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9R173_9HYME)

HSP 1 Score: 84.0 bits (206), Expect = 1.450e-13
Identity = 55/161 (34.16%), Postives = 80/161 (49.69%), Query Frame = 0

Query:  113 WSVRELQLLWELKTNQPDLPPNRVAELMWKATGIR---KTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEACFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKWASIVKDVPELVGRSPDAARN 270
            W+  E  LL +L +N   L       L W A       ++  QC+ RW KV NP + KG W++ EDE + + V+       P  W  I+    KG R  KQCR R+ NHL+PG++   WT AE+  + +A      +   WA I K +P   GR+ +A +N
Sbjct:   84 WTKEEDNLLKQLVSNAEKLGTG----LRWDAVAAHFPDRSDVQCQQRWAKVVNPDLVKGPWTKEEDEKVVELVDRY----GPKKWTLIARH-LKG-RIGKQCRERWHNHLNPGIKKTAWTDAEDKIIVEAHRRVGNQ---WAKIAKLLP---GRTDNAIKN 228

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14576.3510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JFS7_9PHAE	1.120e-182	94.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LIU3_ECTSI	1.540e-112	96.51	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S3PFE6_9STRA	1.900e-15	40.32	Hypothetical protein n=1 Tax=Aplanochytrium stocch...	[more]
A0A6J0P9K7_RAPSA	7.010e-15	36.08	uncharacterized protein LOC108863442 isoform X1 n=...	[more]
D7M7S2_ARALL	1.230e-14	34.36	Myb domain protein 3R-5 n=2 Tax=Camelineae TaxID=9...	[more]
MB3R5_ARATH	1.670e-14	34.36	Transcription factor MYB3R-5 n=5 Tax=Arabidopsis t...	[more]
A0A565CH28_9BRAS	2.930e-14	40.00	Uncharacterized protein n=1 Tax=Arabis nemorensis ...	[more]
A0A078HSU7_BRANA	4.910e-14	34.36	BnaA10g27190D protein n=16 Tax=Brassica TaxID=3705...	[more]
UPI0006232864	5.480e-14	34.16	myb protein isoform X1 n=4 Tax=Linepithema humile ...	[more]
A0A0C9R173_9HYME	1.450e-13	34.16	MYB_0 protein n=1 Tax=Fopius arisanus TaxID=64838 ...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	GENE3D	1.10.10.60		coord: 225..285 e-value: 1.8E-5 score: 26.5
None	No IPR available	GENE3D	1.10.10.60		coord: 166..224 e-value: 1.2E-13 score: 52.7
None	No IPR available	PANTHER	PTHR45614:SF31	MYB-LIKE PROTEIN L	coord: 77..186 coord: 193..386
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 166..221 e-value: 7.6E-10 score: 48.7 coord: 109..163 e-value: 7.6 score: 10.2 coord: 224..278 e-value: 12.0 score: 8.2
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 167..219 e-value: 2.4E-9 score: 37.3
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 193..386
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 77..186
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 105..161 score: 5.691
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 220..271 score: 5.564
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 162..223 score: 14.329
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 164..257
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 113..185

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14576	contig	Ecto-sp13_S_contig14576:80..4240 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14576.3510.1	mRNA_Ecto-sp13_S_contig14576.3510.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14576 80..4240 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14576.3510.1 ID=prot_Ecto-sp13_S_contig14576.3510.1|Name=mRNA_Ecto-sp13_S_contig14576.3510.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=457bp
GGSAGGALSSSGGLHAVGIDALPSSASLPPASSVQQTRPKSPRQLLQQQP
SPHLLLQQPSQQQLREQEDREQEAREREREGRDQGNRGDQDAADDDDDDT
FEADKEYRATKTWSVRELQLLWELKTNQPDLPPNRVAELMWKATGIRKTG
DQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISEA
CFKGKRTSKQCRARFMNHLDPGLRHFPWTFAENAALKKAANAYNGRQIKW
ASIVKDVPELVGRSPDAARNQHKMMGRPRAVFKSFTRAKQPTRVPIRPAR
QQPVAPVRIAPSVSAVGAMHPTAALSPQQQQQINSLGVMLMQQQQQQQQQ
QQQQQQPQLSQQPQQSQQQQPPPSLPPQQQQQQQQQGAAAEGDAPSRSSS
PIVVQQEQQQEQQQAPLLPAASSSAHASSSSAAAASTAAAASAAAEASLQ
RQLEVS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR015495	Myb-like_TF
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf