prot_Ecto-sp13_S_contig14574.3509.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14574.3509.1
Unique Nameprot_Ecto-sp13_S_contig14574.3509.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length413
Homology
BLAST of mRNA_Ecto-sp13_S_contig14574.3509.1 vs. uniprot
Match: D7FIG1_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG1_ECTSI)

HSP 1 Score: 692 bits (1787), Expect = 3.690e-240
Identity = 372/412 (90.29%), Postives = 378/412 (91.75%), Query Frame = 0
Query:    1 ARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKRLHQQPGTGSEEEEAQRYGPGDIVGWPYLMPEPPARGRSPIAARTATSTTTPQKTAIGGGAEDRPNMPPEGNQQERKGRSRRNAKEWRCSITVTTPAQVLSVPLAALLSFLSERATKGLRSYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGAFFSGHVGYDRNAPTLSSGGGTRKGQRKTGRMSSSVARLRPSTAPELIALKTAIPTEECESRRANTTASPGGVHALLEGISSRDNWPRXXXXXXXXXXXRVGLTDSIAYRISTAPQETHNLRRRLQSAPSSPWSSPHVMWGYPRVAERGIGGHGDEAEAGGRRCSCPMESCRVCSPLDR 412
            ARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSK+LHQQPG G EEEEAQRYGPGDIVGWPYLMP PPARGRSPI ARTA  TTTPQKTAIGG AED+PN PPEGN+QERK RSRRNAKEW CSITVTTPAQVLSVPLAALLSFLSERA KGLR YIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELG FFSGH GYDRNAPTL SGGGT K QRKTGRMS  VARLRPSTAPELIALKTAI +EECESRR N T  PGGVHAL+EGISSRDNWPRXXXXXXXXXXXRVGLTDSIA RISTAPQ  HNLRR LQSAPSS  SSP V+WGY RVAERGIGGHGDEAEA G RCSCPMESCRVCSPLDR
Sbjct:  348 ARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDR 759          
BLAST of mRNA_Ecto-sp13_S_contig14574.3509.1 vs. uniprot
Match: A0A6H5L5Z7_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z7_9PHAE)

HSP 1 Score: 441 bits (1134), Expect = 2.160e-143
Identity = 268/413 (64.89%), Postives = 283/413 (68.52%), Query Frame = 0
Query:    1 ARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKRLHQQPGTGSEEEEAQRYGPGDIVGWPYLMPEPPARGRSPIAARTATSTTTPQKTAIGGGAEDRPNMPPEGNQQERKGRSRRNAKEWRCSITVTTPAQVLSVPLAALLSFLSERATKGLRSYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGAFFSGHVGYDRNAPTLSSGGGTRKGQRKTGRMSSSVARLRPSTAPELIALKTAIPTEECESRRANTTASPGGVHALLEGISSRDNWPRXXXXXXXXXXXRVGLTDSIAYRISTAPQETHNLRRRLQSAPSSPWSSPH-VMWGYPRVAERGIGGHGDEAEAGGRRCSCPMESCRVCSPLDR 412
            ARECRRLRAFVALRNSEKAMAIFDKFFINLP+GVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSK+ H+QPGTG EEEEAQRYGPGDIVGW                                           +G Q   +G  +R  K+ R                              +  YIA+THKQKL+GPSS SHSGGLGD+ESLDGESELG FFSGH G DRNAPTL SGGGT K QRKTG+MS  V RLR           T IPTEECESRR NT ASP GV ALL+GISSRDNWPRXXXXXXXXXXXRVGLTDS A  ISTAPQ TH LRR LQSAPSS       V+WGY RVA RGI GHGDEAEA G RCSCPMESCRVC+PLDR
Sbjct:  340 ARECRRLRAFVALRNSEKAMAIFDKFFINLPKGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQFHRQPGTGKEEEEAQRYGPGDIVGWE------------------------------------------QGVQMAVEGVPKRRTKQPRLG---------------------------SVARYIAYTHKQKLQGPSSLSHSGGLGDDESLDGESELGEFFSGHGGCDRNAPTLFSGGGTWKDQRKTGKMSPPVTRLR-----------TVIPTEECESRRPNTAASPVGVQALLDGISSRDNWPRXXXXXXXXXXXRVGLTDSTADPISTAPQGTHKLRRSLQSAPSSXXXXXXPVIWGYARVAGRGIDGHGDEAEARGGRCSCPMESCRVCTPLDR 672          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14574.3509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIG1_ECTSI3.690e-24090.29Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5L5Z7_9PHAE2.160e-14364.89Cyclic nucleotide-binding domain-containing protei... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 26..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14574contigEcto-sp13_S_contig14574:181..4223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14574.3509.1mRNA_Ecto-sp13_S_contig14574.3509.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14574 181..4223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14574.3509.1 ID=prot_Ecto-sp13_S_contig14574.3509.1|Name=mRNA_Ecto-sp13_S_contig14574.3509.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=413bp
ARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMN
QKLAEDGDEVSTVFFVVRGECVSKSSKRLHQQPGTGSEEEEAQRYGPGDI
VGWPYLMPEPPARGRSPIAARTATSTTTPQKTAIGGGAEDRPNMPPEGNQ
QERKGRSRRNAKEWRCSITVTTPAQVLSVPLAALLSFLSERATKGLRSYI
AHTHKQKLEGPSSSSHSGGLGDEESLDGESELGAFFSGHVGYDRNAPTLS
SGGGTRKGQRKTGRMSSSVARLRPSTAPELIALKTAIPTEECESRRANTT
ASPGGVHALLEGISSRDNWPRPRPSTRTRWRWRVGLTDSIAYRISTAPQE
THNLRRRLQSAPSSPWSSPHVMWGYPRVAERGIGGHGDEAEAGGRRCSCP
MESCRVCSPLDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like