mRNA_Ecto-sp13_S_contig14562.3502.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 1175 bits (3039), Expect = 0.000e+0 Identity = 605/653 (92.65%), Postives = 621/653 (95.10%), Query Frame = 1
Query: 1 MVTKRKGRYVATGVTSKGKARTEKANLANMLRAEEAALAVREXXXXXXXXXXXXXXK*AQEKQQQQGPEVDTRTPEQEAREQQAAQQRDDLAPKTGFLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSNGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKDKDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWVASDPVLRGQMGALEEIPESYEDDAPGHNDLVHDDGVEAQEQLELSVEFMECMGDEDADGDAEV 1929
MVTKRKGRYVATGVT+KGK RTEKANLANMLRA+EAALAV XXXXXXXXXXXXXX KQQQQGPE DT P+QEAREQQAAQQRDDLAP+TG LLD SQSRSILLTYFELVQSGVEPNKAVQRTA+TLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVS+GKDGRKLLDDVQCA+LRAFISDKHENGQQVFRRTVREWIKE CNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAA TQE++EEAVIVYMDESFC+QLHGSAYSYFLTDD+GVVQDGMGRTSGKGLRMIMVHAITKGGALAAVD+NNFPIPEGWFKPKDK KGRQGAGSMGTEETAEMLWQAKRATGD HDAMTDKMFM+WLERRL PAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNT LLRKYKCRKITVEREVT SAGVRSK YTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGW+LIWTPPYMPSFQPIELFWQHGK RTMAEVWAQVRKGWYGDPTWEGQ+GGWKPADCSKLVAHAVKEMNKWVASDPVLRGQMGALEEIPESYEDDAPGHND+VHDDGVEAQEQLELS EFMECMGDEDADGDAEV
Sbjct: 1 MVTKRKGRYVATGVTAKGKTRTEKANLANMLRAKEAALAVXXXXXXXXXXXXXXXXXXXXXKQQQQGPEADTGAPQQEAREQQAAQQRDDLAPRTGSLLDTSQSRSILLTYFELVQSGVEPNKAVQRTASTLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSSGKDGRKLLDDVQCANLRAFISDKHENGQQVFRRTVREWIKETCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSSAGVRSKKYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKTKRTMAEVWAQVRKGWYGDPTWEGQKGGWKPADCSKLVAHAVKEMNKWVASDPVLRGQMGALEEIPESYEDDAPGHNDIVHDDGVEAQEQLELSAEFMECMGDEDADGDAEV 653
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5KZM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM0_9PHAE) HSP 1 Score: 667 bits (1720), Expect = 9.240e-236 Identity = 365/406 (89.90%), Postives = 373/406 (91.87%), Query Frame = 1
Query: 1 MVTKRKGRYVATGVTSKGKARTEKANLANMLRAEEAALAVREXXXXXXXXXXXXXXK*AQEKQQQQGPEVDTRTPEQEAREQQAAQQRDDLAPKTGFLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSNGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKDKDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKAKYGNKKMILVLDNAS 1218
MVTKRKGRYVATGVT+KGKARTEKANLANMLRA+EAAL VR XXXXXXXXXXXXXX AREQQAAQQRDDLAPKTG LLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELL SSAEGRGVS+GKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRR GRIKIPPLNDDRKARIRRFLVEMSAA TQE++EEAVIVYMDESFC+QLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVD+NNFPIPEGWFKPKDK KGRQGAGSMGTEETAEMLWQAKRATGD HDAM DKMFM+WLERRL PAFKAKYGNKKMI VLDNAS
Sbjct: 1 MVTKRKGRYVATGVTAKGKARTEKANLANMLRAKEAALVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAREQQAAQQRDDLAPKTGSLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLASSAEGRGVSSGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRGGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMKDKMFMEWLERRLAPAFKAKYGNKKMIFVLDNAS 406
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 554 bits (1428), Expect = 6.210e-188 Identity = 296/547 (54.11%), Postives = 372/547 (68.01%), Query Frame = 1
Query: 271 LAPKTGFLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSNG-KDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKD----KDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK------------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWVAS-DPVLRGQMGALEEIPESYEDDAPGHNDLVHDDGVEAQ 1857
L PKTG L + QSR IL+ YF+LV+ G N A ++ A TLR+G DKV VR W++K EL ++ +GRG + DGR+++ Q LR FI +HE G+QVFRRTV+++++ ++SNRAVGGLL R+G++RRRGRIKIPPLN++RK RIR FLV+M A E AVIVYMDESF +Q HGSAYSYF +DD G+VQDG+GRT+GKGLRMIMVHAIT+ G LA + + FPI EGWFK K+ K K + M E+TAE LWQAK ATGD H+AMTD MFM+WL+ RLTPAF A++ NKKM LVLDNASYHH +D EV VPE+NSK YN LLRKY C V RE G A Y F+VPA G+ P AN GVS E+A TR +F+ P KL EK ET+M +GW LIWTPPYMP+FQPIELFWQHGK R + +VW ++R GWYGDP W+GQE GWK A+C KLV HA+ +M++W+ L G +G+LE Y++ A +++ +DGVE Q
Sbjct: 91 LRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEG-FPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAE----YNFEVPAQGSLPNANRN---GVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQE-ATAEDEI--EDGVEEQ 626
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 547 bits (1410), Expect = 9.490e-185 Identity = 302/552 (54.71%), Postives = 376/552 (68.12%), Query Frame = 1
Query: 268 DLAPKTGFLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRG-VSNGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKDKDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKA--KYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPAT--GTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWVAS-DPVLRGQMGALEEIPESYE-DDAPGHNDLVHDDGVEAQEQLE 1869
++ PK G + QSR +L+ F+L + G N+AV + A T ++G DKV ++ HWW+ +L ++A GRG ++ DGR+ L +VQ LR FI+D+H+ G+QVFRRTV EW+ CN + SNR+VGGLL R+GY+RRRGRIK PPLN +R ARIRRFLVEM A E AVIVYMDESF +Q HGS YSYF +D+NGVVQDG+GRT+GKGLRMIMVHAITK G LA D FPI EGWFK K + M EETAE LWQAK A GD H AMTD MFM+WLE RL+PA+ A ++ KKMILVLDNASYHHG+DAEV VPE+N+K +N LLRK+ + I V+R+ G G + F+VP+ +FP N + GVS EVA ATR + +L +P +L E+V TFM +GW LIWTPPYMPSFQPIELFWQHGK R M EVW Q+R+GWYGD W GQEGGWK A+CSKLV HA+ EMNKWV D L G++G L++ P+ Y+ DD D+ ++GV Q Q E
Sbjct: 124 EVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDG-FPIEEGWFKETGSGKKK-----MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKE-GEQGFVE--HNFEVPSEPGSSFPAGNRE--GGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQK-PDGYDKDDVSPVGDV--EEGVGEQIQQE 661
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 543 bits (1398), Expect = 2.020e-183 Identity = 301/539 (55.84%), Postives = 365/539 (67.72%), Query Frame = 1
Query: 307 QSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSNGKD-GRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKDKDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKA--KYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPAT--GTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWVAS-DPVLRGQMGALEEIPESYE-DDAPGHNDLVHDDGVEAQEQLE 1869
+SR +L+ F+L + G +AV + A T ++G DKV ++ HWW+ +L +A GRG + KD GR+ L +VQ LR FI+D+H+ G+QVFRRTV EW+ CN + SNR+ GGLL R+GY+RRRGRIK PPLN +R ARIRRFLVEM A E AVIVYMDESF +Q HGS YSYF +D++GVVQDG+GRT+GKGLRMIMVHAITK G LA + D PI EGWFK G M EETAE LWQAK A GD H AMTD MFM+WLE RL+PA+ A ++ K+MILVLDNASYHHG+DAEV VPE+N+K +N LLR + + I V R+ G GV Y F+VP +FP N + GVS EVA ATR + L HP +L E+V TFM +GW LIWTPPYMPSFQPIELFWQHGK R M EVW Q+RKGWYGD W GQEGGWK ADCSKLV HA+ EMNKWV D VL G +G+LE+ P+ Y+ DD P D+ ++GV Q Q E
Sbjct: 103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDG-LPIEEGWFKETGS-----GKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKE-GEQGVVE--YNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEK-PDGYDTDDVPPVGDV--EEGVGEQIQQE 627
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 528 bits (1361), Expect = 1.330e-179 Identity = 281/509 (55.21%), Postives = 350/509 (68.76%), Query Frame = 1
Query: 379 RTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSNG-KDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKD----KDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWVAS-DPVLRGQMGALEEIPESYEDDAPGHNDLVHDDGVEAQ 1857
+ A TLR+G D V VR W++K EL ++ +GRG + DGR+++ Q LR FI +HE G+QVFRRTV+++++ ++SNRAVGGLL R+G++RRRGRIKIPPLN++RK RIR FLV+M A E AVIVY+DESF +Q HGSAYSYF +DD GVVQDG+GRT+GKGLRMIMVHAITK G LA + + FPI EGWFK K+ K K + M E+TAE LWQAK ATGD H+AMTD MFM+WL+ RLTPAF A++ NKKM LVLDNASYHH +D EV VPE+NSK YN LLRKY C V RE G A Y F+VPA G+ P AN K GVS E+A TR +F+ P KL EK ET+M +GW LIWTPPYMP+FQPIELFWQHGK R + +VW Q+R GWYGDP W+GQEGGWK A+C KLV HA+ +M++W+ L G +G+LE Y++ A +++ +DGVE Q
Sbjct: 6 QVATTLRIGTDNVLAVRTLWYDKQELYETNGKGRGKATSFDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEG-FPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAE----YNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQE-ATAEDEI--EDGVEEQ 504
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 514 bits (1323), Expect = 5.030e-174 Identity = 273/482 (56.64%), Postives = 329/482 (68.26%), Query Frame = 1
Query: 361 PNKAVQRTAATLRV----------GKDKVFKVRAHWWEKTELLTSSAEGRGVSNG-KDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKD----KDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMN 1731
P+ A Q TA L G DKV VR W++K EL ++ +GRG + DGR+++ Q LR FI +HE G+QVFRRTV+++++ ++SNRAVGGLL R+G++RRRGRIKIPPLN++RK RIR FLV+M A E AVIVYMDESF +Q HGSAYSYF +DD GVVQDG+GRT+GKGLRMIMVHAITK G LA + + FPI EGWFK K+ K K + M E+TAE LWQAK ATGD H+AMTD MFM+WL+ RLTPAF A++ NKKM LVLDNASYHH +D EV VPE+NSK YN LLRKY C V RE G A Y F+VPA G+ P AN K GVS E+A TR +F+ P KL EK ET+M +GW LIWTPPYMP+FQPIELFWQHGK R M +VW Q+R GWYGDP W+GQEGGWK A+C KLV HA+ +M+
Sbjct: 34 PHTATQYTAVFLTKFFPPSVCVDDGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEG-FPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAE----YNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 508
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 512 bits (1319), Expect = 7.990e-174 Identity = 274/470 (58.30%), Postives = 325/470 (69.15%), Query Frame = 1
Query: 379 RTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSNGKD-GRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKDKDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKA--KYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPAT--GTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWV 1740
+ A T ++G DKV ++ HWW+ +L ++A GRG + KD GR+ L +VQ LR FI+D+H+ G+QVFRRTV EW+ CN + SNR+ GGLL R+GY+RRRGRIK PPLN +R ARIRRFLVEM A E AVIVYMDESF +Q HGS YSYF +D++GVVQDG+GRT+GKGLRMIMVHAITK G LA + D PI EGWFK G M EETAE LWQAK A GD H AMTD MFM+WLE RL+PA+ A ++ K+MILVLDNASYHHG+DAEV VPESN+K +N LLR + + I V R+ G GV Y +VP +FP N + GVS EVA ATR + L HP +L E+V TFM +GW LIWTPPYMPSFQPIELFWQHGK R M EVW Q+RKGWYGD W GQEGGWK A+CSKLV HA+ EMNKWV
Sbjct: 10 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDG-LPIEEGWFKETGS-----GKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKE-GEQGVVE--YNLEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWV 468
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 516 bits (1329), Expect = 6.990e-173 Identity = 289/515 (56.12%), Postives = 350/515 (67.96%), Query Frame = 1
Query: 379 RTAATLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSNGKD-GRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKDKDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKA--KYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPAT--GTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWVAS-DPVLRGQMGALEEIPESYE-DDAPGHNDLVHDDGVEAQEQLE 1869
+ A T ++G DKV ++ HWW+ +L ++A GRG + KD GR+ L +VQ LR FI+D+H+ G+QVFRRTV EW+ CN + SNR+ GGLL R+GY+RRRGRIK PPLN +R ARIRRFLV M+ A E AVIVYMDESF +Q HGS YSYF +D++GVVQDG+GRT+GKGLRMIMVHAITK G LA + D PI EGWFK G M EETAE LWQAK A GD H AMTD MFM+WLE RL+PA+ A ++ K+MILVLDNASYHHG+ +EV VPE+N+K +N LLR + + I V R+ G GV Y F+VP +FP N + GVS EVA ATR + L HP +L E+V TFM +GW LIWTPPYMPSFQPIELFWQHGK R M EVW Q+RKGWYGD W GQEGGWK ADCSKLV HA+ EMNKWV D VL G +G+LE+ P+ Y+ DD D+ ++GV Q Q E
Sbjct: 138 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDG-LPIEEGWFKETGS-----GKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKE-GEQGVVE--YNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEK-PDGYDTDDVSPVGDV--EEGVGEQIQQE 637
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Match: A0A6H5KL68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL68_9PHAE) HSP 1 Score: 464 bits (1194), Expect = 1.760e-154 Identity = 261/526 (49.62%), Postives = 336/526 (63.88%), Query Frame = 1
Query: 331 YFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAH-WWEKTELLTSSAEGRGVSNG-KDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDDNNFPIPEGWFKPKD----KDKGRQGAGSMGTEETAEMLWQAKRATGDNHDAMTDKMFMKWLERRLTPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTGLLRKYKCRKITVEREVTGSAGVRSKTYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWRLIWTPPYMPSFQPIELFWQHGK----------RTMAEVWAQVRKGWYGDPTWEGQEGGWKPADCSKLVAHAVKEMNKWVAS-DPVLRGQMGALEEIPESYEDDAPGHNDLVHDDGVEAQ 1857
YF+LV+ G N A ++ + AH W++K EL ++ +GRG + DGR+++ Q +R FI +HE G+QVFRRTV+++++ ++SNRAVGGLL R+G++RRRGRIKIPPLN++RK RIR FLV+M A ++ E+A YSYF +DD GVVQDG+GRT+GKG+RM+MVHAITK G LA + FPI EGWFK K+ K K + M E+TAE LWQAK ATG ++AMTD MFM+WL+ RLTPAF A++ NKKM LVLDNASYHH +D EV VPE+NSK YN LLRKY C V RE G A Y F+VPA G+ P AN K GVS E+A TR +F+ P KL EK ET+M +GW LIWTPPYMP+FQPIELFWQ GK R + +VW Q+R GWYGD W+GQEGGWK A C KLV HA+ +M++W+ L G +G+LE Y++ A +++ +DGVE Q
Sbjct: 3 YFDLVKGGSFENHAKEQQCREDLEDRYGQGPGGAHIWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGIREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLA---KRAEDA----------------GYSYFPSDDTGVVQDGIGRTTGKGVRMVMVHAITKHGPLAELQ-GGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGYYNNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAE----YNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQQGKHYVSIHFERGRNILDVWKQIRLGWYGDSEWDGQEGGWKAASCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQE-ATAEDEI--EDGVEEQ 499 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14562.3502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14562.3502.1 >prot_Ecto-sp13_S_contig14562.3502.1 ID=prot_Ecto-sp13_S_contig14562.3502.1|Name=mRNA_Ecto-sp13_S_contig14562.3502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=393bp MSAAFTQEKEEEAVIVYMDESFCYQLHGSAYSYFLTDDNGVVQDGMGRTSback to top mRNA from alignment at Ecto-sp13_S_contig14562:1005..3189- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14562.3502.1 ID=mRNA_Ecto-sp13_S_contig14562.3502.1|Name=mRNA_Ecto-sp13_S_contig14562.3502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2185bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14562:1005..3189- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14562:1005..3189- >mRNA_Ecto-sp13_S_contig14562.3502.1 ID=mRNA_Ecto-sp13_S_contig14562.3502.1|Name=mRNA_Ecto-sp13_S_contig14562.3502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1179bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14562:1005..3189- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |