mRNA_Ecto-sp13_S_contig14524.3477.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14524.3477.1 vs. uniprot
Match: A0A6H5L3E7_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E7_9PHAE) HSP 1 Score: 920 bits (2379), Expect = 0.000e+0 Identity = 638/749 (85.18%), Postives = 650/749 (86.78%), Query Frame = 1
Query: 1 FCGWSGAGAGRACVGEAAARRPTEKELGGYTISGRDRGRRLWEDWDRGRRSFATATGVQYKEARIAACGGGDQHEVERETSRRIQPPSLPLSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAA-AEGDPADPFHGDLPLAREQRLKMAVAETGSATAEAAASTVSLNGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---KKDDSARMRRYLPGSKGTGQQHSLGAARGEGAPQPRSPSGRKDTDPPVEGKNGGK-VASEAEAGAEEPALLSSRRQGAMNKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKCPPAVGFVGGFRDVPVGAPSSGRRKSTTEALIHALTEPLKPSPRHAAGAEASVGLGGGEFPKTSGRWPTTTKASNGKGAAAVQQDXXXXXXXXXXXXXAGTPRPNARDAFSRVALDERSKEMAPPNRNVTITFDPGASTLLGCITANTDVYGPALCSDTAATLTREETAAYLERWVLIAVKHGVLPRELRALLQDEGHDQRGGTPGYYPVREEGRESAAASGIVGEDGGGPYRVGGRSGTGRTGSSSPHGLGGDGVTSASWTKYGWNRFDVAAPSASVAGDVMQTPQPQTRXXXXXXXXXXXXXXXXXXX-MENIAEALVGGGGEVNGAAHPGASTTRAPSPDTPLPASSAAALRTEWRYRHPDPVAGTAGGSSSPSSSSALGRRAGG 2229
FCGW AG RA VG+AAARRPTEK+LGGYTISGRDRGRRLWEDWDRG RSFATATGVQ KEARIAACGG DQHEVE+ETS RIQPPSLPLSASS XXX AE DPADPFHGDLPLAREQRL MAVAETGSAT EAAAST SLNG++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KKDDSARMRRYLPG+KG GQQHSLGAAR E APQPRSP GR+D DPPVEGKNG K +A EA A AEEPALLSSRR+GA+NKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKCPPAVGFVGGF DVPVGAPSSGRR STTEALIHAL+EPLKPSPRHAAGAEASVGLGGGEFPKTSGRWPTT KASNGKGAAAVQQD XXXXXXXXX G PRPNARDAFSRVALDERSKEMAPPNRNVTITFDPGASTLLGCITANTDVYGPALCSDTAATLTREETAAYLERWVLIAVKHGVLPRELRALLQDEGHDQRGGTPGYY VREEGRE+AAASG VGEDGGGPYRVGGRSG G TGSSSPHGLGG GVTSASWTKYGWNRFDVAAPS SVAGD MQTPQ QTRXXXXXXXXXXXXXXXXXXX MENIAEALVGGGGEVNGAAH GASTTRAPSPDTPLP SSA ALRTEWRYRHPDPVAGTAGGSSSPSSS ALGRRAGG
Sbjct: 145 FCGWGDAGDRRAGVGKAAARRPTEKKLGGYTISGRDRGRRLWEDWDRGHRSFATATGVQNKEARIAACGGDDQHEVEKETSSRIQPPSLPLSASSAGGRSSSERRLLPENSCEGELAAGEEEEIGEAVLPVAAAXXXXXXXXAEVDPADPFHGDLPLAREQRLMMAVAETGSATVEAAASTASLNGYKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLHWADRKKDDSARMRRYLPGTKGNGQQHSLGAARREEAPQPRSPPGREDKDPPVEGKNGVKDMALEAGARAEEPALLSSRREGAVNKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKCPPAVGFVGGFWDVPVGAPSSGRRISTTEALIHALSEPLKPSPRHAAGAEASVGLGGGEFPKTSGRWPTTAKASNGKGAAAVQQDRSGGXXXXXXXXXTGRPRPNARDAFSRVALDERSKEMAPPNRNVTITFDPGASTLLGCITANTDVYGPALCSDTAATLTREETAAYLERWVLIAVKHGVLPRELRALLQDEGHDQRGGTPGYYSVREEGRENAAASGTVGEDGGGPYRVGGRSGIGGTGSSSPHGLGGGGVTSASWTKYGWNRFDVAAPSPSVAGD-MQTPQSQTRXXXXXXXXXXXXXXXXXXXXMENIAEALVGGGGEVNGAAHSGASTTRAPSPDTPLPTSSAGALRTEWRYRHPDPVAGTAGGSSSPSSSFALGRRAGG 892
BLAST of mRNA_Ecto-sp13_S_contig14524.3477.1 vs. uniprot
Match: D7FU33_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU33_ECTSI) HSP 1 Score: 767 bits (1980), Expect = 1.030e-264 Identity = 573/707 (81.05%), Postives = 588/707 (83.17%), Query Frame = 1
Query: 70 EKELGGYTISGRDRGRRLWEDWDRGRRSFATATGVQYKEARIAACGGGDQHEVERETSRRIQPPSLPLSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAAAEGDPADPFHGDLPLAREQRLKMAVAETGSATAEAAASTVSLNGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDDSARMRRYLPGSKGTGQQHSLGAARGEGAPQPRSPSGRKDTDPPVEGKNGGK-VASEAEAGAEEPALLSSRRQGAMNKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RKCPPAVGFVGGFRDVPVGAPSSGRRKSTTEALIHALTEPLKPSPRHAAGAEASVGLGGGEFPKTSGRWPTTTKASNGKGAAAVQQDXXXXXXXXXXXXXAGTPRPNARDAFSRVALDERSKEMAPPNRNVTITFDPGASTLLGCITANTDVYGPALCSDTAATLTREETAAYLERWVLIAVKHGVLPRELRALLQDEGHDQRGGTPGYYPVREEGRESAAASGIVGEDGGGPYRVGGRSGTGRTGSSSPHGLGGDGVTSASWTKYGWNRFDVAAPSASVAGDVMQTPQPQTRXXXXXXXXXXXXXXXXXXX--MENIAEALVGGGGEVNGAAHPGASTTRAPSPDTPLPASSAAALRTEWRYRHPDPVAGT 2172
+K+LGGYTISGRDRGRR WEDW+RG RSFAT TGVQ KEA IAACGGG QHEVERETS RIQPPSLPLSAS XXXXXXXXXXXX AVA A+ DPADPFHGDLPLAREQRLKMAVAETGSAT EAAAST SLNGH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DSARMRRYLPG+KGTGQQHSLGAARGEGAPQPRS GRKD DPPVEGKNGGK +ASEAE+ AEEPALLSSRR+GA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKCPPAVGFVGGFRDVPVGAPSSGRRKSTTEALIHAL+EPLKPSPRHAAGAEASVGLGGGEFPKTSGRWPTTTKASNGKGA AVQQ XXXXXX PRPNARDAFSRVALDERS+EMAPPNRNVTITFDPGASTLLGCITANTDVYGPALCSDTAATLTREETAAYLERWVLIAVKHGVLPRELRALLQDEGH QRGGTPGYY VREEGRE+AA++G VGEDGGGPYRVGGRSGTG TGSSSPHGLGGD VTS SWTKYGWNRFDVAAPSA VAGDV QTPQP+T+ XXXXXXXXXXXXXXXXXX MENIAEALVG AA R E R R PDPV GT
Sbjct: 8 QKKLGGYTISGRDRGRRSWEDWERGHRSFATVTGVQNKEASIAACGGGGQHEVERETSSRIQPPSLPLSASXXXXXXXXXXXXXPENSCGGELVAGEEEEVGEAVHPVAVAAA-AVAEAKADPADPFHGDLPLAREQRLKMAVAETGSATVEAAASTASLNGHNRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DSARMRRYLPGTKGTGQQHSLGAARGEGAPQPRSSPGRKDKDPPVEGKNGGKDMASEAESRAEEPALLSSRRKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQRKCPPAVGFVGGFRDVPVGAPSSGRRKSTTEALIHALSEPLKPSPRHAAGAEASVGLGGGEFPKTSGRWPTTTKASNGKGATAVQQGRSGGXXXXXXR-----PRPNARDAFSRVALDERSREMAPPNRNVTITFDPGASTLLGCITANTDVYGPALCSDTAATLTREETAAYLERWVLIAVKHGVLPRELRALLQDEGHGQRGGTPGYYSVREEGRETAASTGTVGEDGGGPYRVGGRSGTGGTGSSSPHGLGGDSVTSVSWTKYGWNRFDVAAPSAGVAGDV-QTPQPRTQRXXXXXXXXXXXXXXXXXXXXMENIAEALVG-----------------------------AAPWRREGRSRPPDPVVGT 675 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14524.3477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14524.3477.1 >prot_Ecto-sp13_S_contig14524.3477.1 ID=prot_Ecto-sp13_S_contig14524.3477.1|Name=mRNA_Ecto-sp13_S_contig14524.3477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=743bp FCGWSGAGAGRACVGEAAARRPTEKELGGYTISGRDRGRRLWEDWDRGRRback to top mRNA from alignment at Ecto-sp13_S_contig14524:1318..4396- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14524.3477.1 ID=mRNA_Ecto-sp13_S_contig14524.3477.1|Name=mRNA_Ecto-sp13_S_contig14524.3477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3079bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14524:1318..4396- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14524:1318..4396- >mRNA_Ecto-sp13_S_contig14524.3477.1 ID=mRNA_Ecto-sp13_S_contig14524.3477.1|Name=mRNA_Ecto-sp13_S_contig14524.3477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2229bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14524:1318..4396- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |