mRNA_Ecto-sp13_S_contig14511.3467.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: D8LTS2_ECTSI (Similar to Gram-negative bacteria-binding protein 1, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS2_ECTSI) HSP 1 Score: 290 bits (743), Expect = 3.260e-96 Identity = 162/219 (73.97%), Postives = 172/219 (78.54%), Query Frame = 1
Query: 127 MTTVTLAQSTGDSNQGEGLSNGQQKARNLKRMKKKKNVKAKTSTDHEYLGCYRYNKDIRRLLKNGKSFFDKTDQVLCRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGGVFSITMFEYQDVDSSTGTVENEEHXXXXXXXXXXXXX-----------------------GFSSSIE-SVCINGVSGIESDGVCCEIRC 711
MT+VTLAQS GDSNQGEG+ NGQQ AR+LKRMK++K VKA+ STDHEYLGCYRYNK+ LLKNGKSFFDKTDQ LCRAHCEEYDTAFYA+E GD+CWCPTS DINDYIIDEVG CD PCTGDPSIFCGGV SI+MFEYQDVDSST T E EE XXXXXXXXXXX GFSSS E SVC NGVSGIESDGVCCEI C
Sbjct: 1 MTSVTLAQSAGDSNQGEGVRNGQQGARSLKRMKREKKVKARASTDHEYLGCYRYNKENGMLLKNGKSFFDKTDQALCRAHCEEYDTAFYALEDGDVCWCPTSPDINDYIIDEVGICDKPCTGDPSIFCGGVSSISMFEYQDVDSSTSTGEYEEDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSSSTEESVCTNGVSGIESDGVCCEISC 219
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 300 bits (769), Expect = 6.610e-96 Identity = 151/183 (82.51%), Postives = 159/183 (86.89%), Query Frame = 1
Query: 160 DSNQGEGLSNGQQKARNLKRMKKKKNVKAKTSTDHEYLGCYRYNKDIRRLLKNGKSFFDKTDQVLCRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGGVFSITMFEYQDVDSSTGTVENEEHXXXXXXXXXXXXXGFSSSIESVCINGVSGIESDGVCCEIR 708
D QGEGL NGQQ ARN +RMKK+K V+AK STDHEYLGCYRYNKDI LLKNGKSF+DKTDQ LCRAHCEEYDTAFYAMEHGDICWCPTS DINDYIID+VG+CD PCTGDPSIFCGGVFSI+MFEYQDV SSTGT E EE+ XXXXX X GFSSS ESVC NGVSGIESDGVCCEIR
Sbjct: 47 DDRQGEGLRNGQQGARNPERMKKEKKVEAKASTDHEYLGCYRYNKDISSLLKNGKSFYDKTDQALCRAHCEEYDTAFYAMEHGDICWCPTSPDINDYIIDDVGNCDKPCTGDPSIFCGGVFSISMFEYQDVGSSTGTGEYEEYEXXXXXVQEXDDDGFSSSTESVCTNGVSGIESDGVCCEIR 229
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 1.620e-7 Identity = 34/100 (34.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 259 DHEYLGCYRYNKDIRRLLKNGKSFFDKTDQVLCRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGGVFSITMFEYQDVDS 558
D YLGCY D R + + + D C +C Y +Y ++ CWC +AD Y + G+CD C+GD S CGG +S++++E DVD+
Sbjct: 238 DPSYLGCYADPADSR--IFDLVATADDMTSENCLGNCGAYQ--YYGTQYSTQCWCGDNAD---YDANGAGECDMACSGDSSEICGGFYSMSVYENDDVDA 330
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A0G4LQU0_9PEZI (Uncharacterized protein n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4LQU0_9PEZI) HSP 1 Score: 60.8 bits (146), Expect = 4.800e-7 Identity = 35/110 (31.82%), Postives = 52/110 (47.27%), Query Frame = 1
Query: 259 DHEYLGCYRYNKDIRRLLKNGKSFFDKTDQVL---CRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGGVFSITMFEYQDVDSSTGTVEN 579
D + GCY +R L NG+ + D D++ C A CE + ++ E+G CWC + GDC+ PC GD S FCG + M+ + D+S G V +
Sbjct: 673 DWSFEGCYTEGDGVRAL--NGRFYAD--DELTLEKCAAFCEGF--VYFGAEYGRECWCGDVHGTGSVLASNQGDCNFPCGGDGSQFCGAGNRLQMYRFGGADTSWGAVSS 776
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A0G4LRZ0_9PEZI (Uncharacterized protein n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4LRZ0_9PEZI) HSP 1 Score: 60.1 bits (144), Expect = 8.790e-7 Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 1
Query: 259 DHEYLGCYRYNKDIRRLLKNGKSFFDKTDQVL---CRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGGVFSITMFEYQDVDSSTGTVEN 579
D + GCY +R L NG+ + D D++ C A CE + ++ E+G CWC + GDC+ PC GD S FCG + M+ + D+ +G V +
Sbjct: 744 DWSFEGCYTEGDGVRAL--NGRFYAD--DELTLEKCAAFCEGF--VYFGAEYGRECWCGDVHGTGSVLASNQGDCNFPCGGDGSQFCGAGNRLQMYRFGGADAPSGAVSS 847
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A0G4M099_9PEZI (Uncharacterized protein n=12 Tax=Verticillium TaxID=1036719 RepID=A0A0G4M099_9PEZI) HSP 1 Score: 60.1 bits (144), Expect = 9.200e-7 Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 1
Query: 259 DHEYLGCYRYNKDIRRLLKNGKSFFDKTDQVL---CRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGGVFSITMFEYQDVDSSTGTVEN 579
D + GCY +R L NG+ + D D++ C A CE + ++ E+G CWC + GDC+ PC GD S FCG + M+ + D+ +G V +
Sbjct: 1195 DWSFEGCYTEGDGVRAL--NGRFYAD--DELTLEKCAAFCEGF--VYFGAEYGRECWCGDVHGTGSVLASNQGDCNFPCGGDGSQFCGAGNRLQMYRFGGADAPSGAVSS 1298
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A8I6RD67_CIMLE (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RD67_CIMLE) HSP 1 Score: 56.2 bits (134), Expect = 1.570e-5 Identity = 33/120 (27.50%), Postives = 57/120 (47.50%), Query Frame = 1
Query: 244 AKTSTDHEYLGCYRYNKDIRRLLKNGKSFFD-KTDQVLCRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGG-----VFSITMFEYQDVDSSTGTVENEE 585
A+ Y+GC+ Y+ ++ RLL N FD K C + C + ++H C+C + +++ E +CD PC GD SI+CGG V+ + +Y + D G ++ +
Sbjct: 78 ARNPVSSNYIGCF-YDSNLNRLLVNAYKDFDGKLTPEACVSFCYRGGYRYAGVQHKSNCYCGSEVPLSNKRSQET-ECDLPCPGDGSIYCGGSARSSVYYTEITDYSEDDRLLGCYKDSD 195
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A8I6RDE2_CIMLE (Uncharacterized protein n=2 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RDE2_CIMLE) HSP 1 Score: 56.2 bits (134), Expect = 1.640e-5 Identity = 33/120 (27.50%), Postives = 57/120 (47.50%), Query Frame = 1
Query: 244 AKTSTDHEYLGCYRYNKDIRRLLKNGKSFFD-KTDQVLCRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGG-----VFSITMFEYQDVDSSTGTVENEE 585
A+ Y+GC+ Y+ ++ RLL N FD K C + C + ++H C+C + +++ E +CD PC GD SI+CGG V+ + +Y + D G ++ +
Sbjct: 234 ARNPVSSNYIGCF-YDSNLNRLLVNAYKDFDGKLTPEACVSFCYRGGYRYAGVQHKSNCYCGSEVPLSNKRSQET-ECDLPCPGDGSIYCGGSARSSVYYTEITDYSEDDRLLGCYKDSD 351
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A0C3KZP9_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3KZP9_9AGAM) HSP 1 Score: 53.1 bits (126), Expect = 7.170e-5 Identity = 29/102 (28.43%), Postives = 47/102 (46.08%), Query Frame = 1
Query: 271 LGCYRYNKDIRRLLKNGKSFFDKTDQVL--CRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGDCDNPCTGDPSIFCGGVFSITMFEYQDVDSSTGT 570
LGCY R L +G S+ C+A+C + +E+G C+C + + + C+ C DPS +CGG +++T+F Y V S+ T
Sbjct: 30 LGCYTDQNSPRTL--SGASYSSTVTMTYDTCKAYCLGKGYNYAGVEYGSQCYCGNALNSPGKLAASQTSCNKACASDPSNYCGGTWTLTVFYYNGVAGSSAT 129
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Match: A0A094CD33_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Pseudogymnoascus sp. VKM F-3775 TaxID=1420901 RepID=A0A094CD33_9PEZI) HSP 1 Score: 53.9 bits (128), Expect = 9.000e-5 Identity = 30/93 (32.26%), Postives = 45/93 (48.39%), Query Frame = 1
Query: 271 LGCYRYNKDIRRLLKNGKSFFDKTDQV--LCRAHCEEYDTAFYAMEHGDICWCPTSADINDYIIDEVGD-CDNPCTGDPSIFCGGVFSITMFE 540
LGCY + +R L N + +Q +C A C+ + E+ CWC S D N ++ + C PC GD S+FCGG +T+F+
Sbjct: 161 LGCYTDSVSLRTLATNVQVEGGPGNQSPDVCTAACKAAGFRYAGNEYSGECWCGNSLDNNGGPAPDLNEQCQMPCNGDSSLFCGGPNRLTLFD 253 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14511.3467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14511.3467.1 >prot_Ecto-sp13_S_contig14511.3467.1 ID=prot_Ecto-sp13_S_contig14511.3467.1|Name=mRNA_Ecto-sp13_S_contig14511.3467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp RPHTTNHSPPPPLRLEGRLTSYFPTINRFSTMVRLTAFLLVVMTTVTLAQback to top mRNA from alignment at Ecto-sp13_S_contig14511:409..3758- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14511.3467.1 ID=mRNA_Ecto-sp13_S_contig14511.3467.1|Name=mRNA_Ecto-sp13_S_contig14511.3467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14511:409..3758- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14511:409..3758- >mRNA_Ecto-sp13_S_contig14511.3467.1 ID=mRNA_Ecto-sp13_S_contig14511.3467.1|Name=mRNA_Ecto-sp13_S_contig14511.3467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14511:409..3758- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |