mRNA_Ecto-sp13_S_contig14489.3450.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 568 bits (1465), Expect = 1.760e-194 Identity = 294/328 (89.63%), Postives = 303/328 (92.38%), Query Frame = 1
Query: 1 QVTDITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRADNQGSAPGGVGAQEKLAQEEVPADEDCVTAKKRVQKCNARCRKGLEEPETIKGNEACTSCGGLWEDVIITHPKGSGKACPEAMEKESRECVEDCPADPLVLEGDKKAAKEGGDXXXXXXXXXXXXEPAVELVVRAEGVESSTQETYCPIDQELWTECSSDCLQERYLDDACGKEAEVR 984
+VTDITVN+VSIAKDAAIFQ+GKGIIVDSGTTDTYLP+SVAKGFSAAWE+ATGSPYANCKDNHFCMILTSAELEALPT+TIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNH VGFAEGVCDYRADNQGSAPG VGAQ LAQEEVPADEDCVTAKKRVQKCNA C KGLEEPE IKGNEAC +WEDVIIT PKGSGKACP+AMEKE RECVEDCPADP VLEG KKAAKEGGD XXXXXXXX EPAVELVVRA GVESST ETYC IDQELWTECS DCLQER+LDDACGKEAE R
Sbjct: 328 KVTDITVNQVSIAKDAAIFQKGKGIIVDSGTTDTYLPKSVAKGFSAAWERATGSPYANCKDNHFCMILTSAELEALPTITIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHSVGFAEGVCDYRADNQGSAPGVVGAQ--LAQEEVPADEDCVTAKKRVQKCNASCPKGLEEPEAIKGNEACC----IWEDVIITRPKGSGKACPDAMEKEIRECVEDCPADPRVLEGGKKAAKEGGDGEKXXXXXXXXGEPAVELVVRAGGVESSTHETYCSIDQELWTECSLDCLQERFLDDACGKEAEAR 649
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 309 bits (792), Expect = 2.930e-98 Identity = 155/246 (63.01%), Postives = 186/246 (75.61%), Query Frame = 1
Query: 1 QVTDITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMDALGKD-NAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRADNQGSAPGGVGAQEKLAQEEVPADEDCVTAKKRVQKCNARCRKGLEEPETIKGNEACTSCGGLWEDVIITHPKGSGKACPEAMEKESRECVEDCP 735
+VTD+T+N VSI DA++FQ+G GI V SGTTD YLPR+VA+GFSAAWE ATGSPYA CK N FCM T+A+LE LP +TIHMDGG+EVNV+P YMDA D NAYAPRIYLTESMGG LGA + DHNVVFD+DNH+VGFA+G CDY AD++GS G GA+ A E A+ DCVTA KRV++C+A C G EP T +G+E +W D IITHP+GSG+ACPE M +E R CV+DCP
Sbjct: 310 KVTDVTLNGVSITTDASVFQKGTGIKVVSGTTDMYLPRAVAEGFSAAWEAATGSPYATCKSNEFCMTRTTADLETLPVLTIHMDGGVEVNVQPEAYMDASSDDENAYAPRIYLTESMGGELGAILFRDHNVVFDYDNHVVGFADGACDYHADSRGSDGGRAGAKGGPAVE-AEANVDCVTAVKRVEECDAECPTGQSEPSTAEGHE-------IWVDEIITHPQGSGQACPEKMAEERRGCVKDCP 547
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 142 bits (357), Expect = 8.250e-34 Identity = 75/140 (53.57%), Postives = 88/140 (62.86%), Query Frame = 1
Query: 37 AKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMD---ALGKDNA--YAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCD 441
A+ +F G G IVDSGTTD YLP VA FS AWE ATG PYA C N FC+ LT E LP V+ + G+EV V P Y++ GK + YAPRIYLTES G VLGANVMLD NV+FD N +GFA+ C+
Sbjct: 380 AETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGNSFCLKLTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKETAGKPHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 519
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A7S3YC94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC94_HETAK) HSP 1 Score: 137 bits (345), Expect = 4.050e-33 Identity = 95/244 (38.93%), Postives = 124/244 (50.82%), Query Frame = 1
Query: 10 DITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRADNQGSAPGGVGAQEKLAQEEVPADEDC-VTAKKRVQKCNARCRKGLEEPETIKGNEACTSCGGLWEDVIITHPKGSG-KACPEAMEK-ESRECVEDC 732
+I V + A+ + GKG IVDSGTTDTYL R VA F A W A+G Y+N L+ A+L ALP+VT G+EV VRP YM+ G N Y PRIYL ES G VLGAN M H+V FD +N VGFAE CD G +G D+DC V+ + Q C+A C G + G E +WE V++ +G+G + CP + +++ C DC
Sbjct: 267 EIRVGGEKLNVGASNYNGGKGTIVDSGTTDTYLNRHVANEFKAKWHAASGMTYSNAAKT-----LSEAQLAALPSVTYVFGNGVEVVVRPESYMEKTGT-NKYTPRIYLDESSGNVLGANFMDRHDVFFDEENGRVGFAESSCDM---------GVIGRA---------TDQDCEVSEPELAQACDATCAPG--QVGAASGVE-------VWESVVLRPQRGAGSRPCPAEEDLVKTKACALDC 477
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 134 bits (338), Expect = 5.290e-32 Identity = 77/149 (51.68%), Postives = 90/149 (60.40%), Query Frame = 1
Query: 10 DITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMD-ALGKDNA-YAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRA 450
DI + SI D A + RGKG+IVDSGTTDTYLP + A GF A W+ TG Y N M L+ A+ ALPT T GG+ V+V+P YMD A D A Y PR+YL E G VLGAN M DH+VVFD N VGFA CD+ A
Sbjct: 215 DILIGGESINVDPAQYNRGKGVIVDSGTTDTYLPSACADGFRAQWQALTGMAYDNKP-----MKLSKAQFAALPTFTFVFAGGVRVDVKPEAYMDVAADHDGAGYTPRMYLDERDGAVLGANFMRDHDVVFDHANKRVGFAPANCDWSA 358
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.860e-28 Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 13 ITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGG----LEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDY 444
+ V VS++ + GKG+IVDSGTTDTYLP+ A F AW +G Y N K M L + +PT+T G +EV++RP+ YM+ G D Y PR+YLTE G VLGAN M DHNV+FD ++ VGFA C Y
Sbjct: 290 LRVGDVSLSVSGNSYNSGKGVIVDSGTTDTYLPKKAAGAFKKAWRSLSGREYGNGK-----MTLDAENFARIPTITFVFQGAHGEDVEVHMRPNAYMEQQGSDK-YVPRVYLTEGSGMVLGANFMQDHNVLFDAEHKRVGFARSDCSY 431
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 122 bits (305), Expect = 9.740e-28 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 1 QVTDITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATG-SP-YANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRA 450
Q+ D+ +N SI + + GKG IVDSGTTDTYLPR A+ F AW A G SP YAN K + T+A+ PT+T GG++V+V YM+ G + PR+YLTE+ G VLGAN M DH+ FD + VGFA CDY +
Sbjct: 296 QLKDVLLNGKSIGVPESTWNTGKGTIVDSGTTDTYLPRRAAEQFKRAWHAAMGPSPKYANSK-----LAYTAAQAAKFPTITYVFAGGVKVDVEGKAYMEKAGAGR-WVPRVYLTEASGTVLGANFMEDHDCFFDAERRRVGFARADCDYHS 441
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A4D9CR18_9STRA (Peptidase A1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR18_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.380e-27 Identity = 82/235 (34.89%), Postives = 117/235 (49.79%), Query Frame = 1
Query: 10 DITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRADNQGSAPGGVGAQEKLAQEEVPADEDCVTAK-KRVQKCNARCRKGLEEPETIKGNEACTSCGGLWEDVIITHP-KGSGKACPEAMEKE 708
DI + SI D +F G+G IVDSGTTDTYLPRSVA F ++ G Y++ M L+ +E+EALP + +D G+EV + Y++ + + A ++L G VLGAN M +VVF+ D+ +GFA C Y AP V A E+ D DC A V +C+A C +E ++G + ++ I+ P G+GKACP KE
Sbjct: 311 DIKIGNTSIGVDPNVFNAGQGTIVDSGTTDTYLPRSVASAFQRVFQDVAGVAYSSRS-----MRLSPSEMEALPPLVFVLDNGVEVPMPRENYLECMENGASCAGSVFLDNGSGAVLGANFMRGQDVVFNLDDKQIGFAPASCAYVEGESSPAPV-VSTAAASAGEDGKEDLDCEMAVGDPVGECSAVCPGDGKEAGVLEGEQKM--------EMKISRPASGNGKACPPLPLKE 531
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.310e-26 Identity = 79/187 (42.25%), Postives = 94/187 (50.27%), Query Frame = 1
Query: 10 DITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHMDGGLEVNVRPSGYMDA----------------LGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRADNQGSAPGGVGAQEKLAQEEVPAD 522
D+ + SI AA++ RGKG IVDSGTTDTYLP + A F AAW ATG Y+ L AEL ALP +T GG V+V P YM A +GK +Y R+YL E+ G VLGAN M DH+V FD N VGFA C++ A A A A E PAD
Sbjct: 211 DVQIGGASIGAPAAVYARGKGAIVDSGTTDTYLPEACAARFRAAWRAATGRDYSESAPQR----LARAELAALPALTFVFRGGARVDVLPEAYMVARAALTLTRLAASAQEKVGK--SYVARVYLDEANGAVLGANFMRDHDVFFDQANSRVGFAPANCNWTALEAAKA-----AAVAAATSEPPAD 386
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Match: A0A7R9U4S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4S4_9STRA) HSP 1 Score: 114 bits (286), Expect = 3.820e-25 Identity = 74/188 (39.36%), Postives = 105/188 (55.85%), Query Frame = 1
Query: 1 QVTDITVN--RVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKATGSPYANCKDNHFCMILTSAELEALPTVTIHM--DGG---LEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHLVGFAEGVCDYRA----------DNQGSAPGGVGAQEKLAQEEV 513
+V DI + RV++AK GKG+IVDSGTTDTYLPR+ A F AW++ATG + N + L+ +E+ ALP + +H+ DGG + V++ P YM+ D +Y RIYL E GGVLGAN M H+V FD + + +GFA C++R DN P ++ +A +EV
Sbjct: 249 EVLDIFIGDERVAVAKSVYDNGSGKGMIVDSGTTDTYLPRACATKFKEAWQRATGMRFTNN-----ALQLSRSEMLALPKIHVHLSGDGGNPPVVVDMSPIDYMEVQ-NDFSYIARIYLDEPQGGVLGANFMRSHDVHFDPEANRIGFAPSDCNFRPQDIDCQLSSWDNSTCVPNAECTEDMIANKEV 430 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14489.3450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14489.3450.1 >prot_Ecto-sp13_S_contig14489.3450.1 ID=prot_Ecto-sp13_S_contig14489.3450.1|Name=mRNA_Ecto-sp13_S_contig14489.3450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=328bp QVTDITVNRVSIAKDAAIFQRGKGIIVDSGTTDTYLPRSVAKGFSAAWEKback to top mRNA from alignment at Ecto-sp13_S_contig14489:187..4232+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14489.3450.1 ID=mRNA_Ecto-sp13_S_contig14489.3450.1|Name=mRNA_Ecto-sp13_S_contig14489.3450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4046bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14489:187..4232+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14489:187..4232+ >mRNA_Ecto-sp13_S_contig14489.3450.1 ID=mRNA_Ecto-sp13_S_contig14489.3450.1|Name=mRNA_Ecto-sp13_S_contig14489.3450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=984bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14489:187..4232+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |