prot_Ecto-sp13_S_contig14488.3449.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14488.3449.1
Unique Nameprot_Ecto-sp13_S_contig14488.3449.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.340e-29
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIASDECAFEAGAT 57
            MTQLQFLATLSLVDYVMDEDSW ADFVTGLRWINLWWPAEVGQNIASDECAFEAGA+
Sbjct: 1201 MTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGAS 1257          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 6.680e-27
Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIASDECAFEAGAT 57
            MTQLQFLATLSLVDYVMDEDSW ADFVTGLRWINLWW AEVGQNIASDE AFEAGA+
Sbjct:  221 MTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGAS 277          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.270e-21
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIASDECAFEAGAT 57
            MTQLQFLA LSLVDYV+ + SW ADFV GLRWINLWWPA++G++IASD C FE GA+
Sbjct: 1430 MTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGAS 1486          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.730e-21
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIASDECAFEAGAT 57
            MTQLQFLA LSLVDYV+ + SW ADFV GLRWINLWWPAE+G++I SD C FE GA+
Sbjct: 1389 MTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGAS 1445          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-6
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIAS 47
            +TQ+QFLATLSLVD    EDS  ++    LRW+NLW P  VG+  +S
Sbjct:   57 LTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSS 103          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D7G8U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U8_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 6.810e-6
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIASDEC 50
            M QLQFLATLSLV  V D  S+ + FV  LRW+NLW P  +  ++  D C
Sbjct: 1637 MMQLQFLATLSLVQSVHDSASFLSSFVENLRWVNLWLP--MPSSLTPDSC 1684          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: A0A6H5KSF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF8_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.280e-5
Identity = 25/38 (65.79%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    1 MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWP 38
            MTQLQFLATLSLV  V D  S  + FV  LRW+NLW P
Sbjct: 1819 MTQLQFLATLSLVQSVHDSASSLSSFVENLRWVNLWLP 1856          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FWS4_ECTSI1.340e-2996.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR60_9PHAE6.680e-2792.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD90_9PHAE1.270e-2173.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG6_ECTSI1.730e-2173.68Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1L9_ECTSI1.400e-653.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8U8_ECTSI6.810e-652.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSF8_9PHAE1.280e-565.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14488contigEcto-sp13_S_contig14488:1776..2329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14488.3449.1mRNA_Ecto-sp13_S_contig14488.3449.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14488 1680..4404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14488.3449.1 ID=prot_Ecto-sp13_S_contig14488.3449.1|Name=mRNA_Ecto-sp13_S_contig14488.3449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIASDEC
AFEAGATLRWS*
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