mRNA_Ecto-sp13_S_contig14488.3449.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14488.3449.1
Unique NamemRNA_Ecto-sp13_S_contig14488.3449.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 570 bits (1469), Expect = 9.910e-186
Identity = 290/312 (92.95%), Postives = 300/312 (96.15%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSPDLADPSPFARQSPRASGTLSTLHEEESDMSDEEEGGQGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMFFI 1196
            GNLALVIGILLAIFF+HV AVSGVEALWLTKKRARENLD+ARRRGAPIGELQARLRGG IICRT+PDLADPSPFARQ+P+ SGT STLHEEESDMSDEEEGG+GLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAV+SFASAIRNSECPE+FYTAIAAMVLYPLLMF TVFRTLLVRVRPNVLLIFKTYAE GTNGDAPSRAGG LSRFKSSWAENYSLFSWADKGQWETVQTPDRQ+SREGDWFRIGFEPVFVDYTK GTWFIVISLVEWAA A VGVMIE SVVQL+LFCGLH VMFFI
Sbjct: 1266 GNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFI 1577          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 1.450e-182
Identity = 274/312 (87.82%), Postives = 291/312 (93.27%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSPDLADPSPFARQSPRASGTLSTLHEEESDMSDEEEGGQGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMFFI 1196
            GN+ALV GILLAIFFIHV AVSGVEALWLTKK ARENLD+ARRRGAPIGELQARLRG  IICRT+PDLADPSPF+RQ+P ASGTLSTL+EEESDMSDEEEGG+G VPMRSENRL+PVATCREHSTSAWLHFPHVELVF FFAFEGAV+SFASAIRN ECP++FYTAIAAMVL PLLMF TVFRTLLVRVRPNVLLIFKTYAEGGT+GDAPSRAGGFLSRFKSSW ENYSLFSWADK QWET QTPDRQISREGDW RIGFEPVFV+YTK GTWFIVISLVEW ALALVGVM+E S+VQL+LFCGL  V+F I
Sbjct:  286 GNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDLADPSPFSRQAPHASGTLSTLNEEESDMSDEEEGGRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLI 597          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 478 bits (1230), Expect = 2.080e-149
Identity = 248/312 (79.49%), Postives = 268/312 (85.90%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSPDLADPSPFARQSPRASGTLSTLHEEESDMSDEEEGGQGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMFFI 1196
            GNLALV+GILLAIFF+HV  VSG EALWLTKKRARENLD ARRR  PI EL AR RGG +I RT+P L DPSPF  ++P       +L  + S  +DEEEGG+GLVPM SEN+LSPVATCREHSTSAWLHFPHVELVFLFFAFEGAV+SFASAIRNSECPEMFYTAIAAMVLYPLLMFATV RTL VRVRP+ LLIFKTY E GTNG+AP+  GGFLS FKSSWAENYSLFSWADKGQWETVQTP+R I+REGDWFRIGFEPVFVDYTK GTWFIVISLVEWA++ALVGVMI+ S VQLLLFCGL   MF I
Sbjct: 1454 GNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNP-------SLVRDRSQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLI 1758          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 476 bits (1225), Expect = 9.760e-149
Identity = 248/312 (79.49%), Postives = 267/312 (85.58%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSPDLADPSPFARQSPRASGTLSTLHEEESDMSDEEEGGQGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMFFI 1196
            GNLALV+GILLAIFF+HV  VSG EALWLTKKRARENLD ARRR  PI EL AR RGG II +T+P L DPSPFA ++P       +L  + S  +DEEEGG+ LVPM SENRLSPVA CREHSTSAWLHFPHVELVFLFFAFEGAV+SFASAIRNSECPEMFYTAIAAMVLYPLLMFATV RTL VRVRP+ LLIFKTY E GTNG+ P+  GGFLSRFKSSWAENYSLFSWADKGQWETVQTP+R I+REGDWFRIGFEPVFVDYTK GTWFIVISLVEWA++ALVGVMI+ S VQLLLFCGL   MF I
Sbjct: 1495 GNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNP-------SLVRDGSQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLI 1799          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 2.730e-79
Identity = 168/375 (44.80%), Postives = 212/375 (56.53%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRG-------------------APIGELQARLRGGTIIC-----------RTSPDLADPS----------------PFARQSPRASGTLSTLHEEESDMSDE-----------EEGGQGLVPM-RSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAP-------SRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMF 1190
            GN  LV G L+ IF +HV  VSGVEA WL KKRA+E    ARR G                   AP+ E  AR  GGT              R  P L + +                P   +  R    ++   E++   SD+           EEGG GL  + R+E+RLSPVA CREHS SAWLHFPHVELVFLFFA+EGAV+S  SA+R + CP +   A  A+V YP+LMF  V RT  VRVRPN L++F         GDA        +R+  FLS+ ++ W E++SLF+WA+KG WET +T +    REG WFRIGFEP+FVD+TKSG WF+  +LVEWAAL  +G +I+ESV+QL LFC LH + F
Sbjct:  849 GNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSF 1223          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.000e-70
Identity = 145/319 (45.45%), Postives = 200/319 (62.70%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSPDL-ADPSPFARQSPRASGTLSTLHEEESDMS---DEEEGGQGLVPMRSENR--LSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEG---GTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMF 1190
            GN+ L   +LL I  IH+V VS VEA WL+K+RA E L  A+RRG PI  L AR R   +    SPD  +DP   A  +    G +S  H     +    D EE G   +P+RS  +   + +A CR  S+S WL+FPH+EL+FL FAFEGA++S  + +R   CP +FY+A A++V+YP+LM    +RT  VRV P+ L++FK   E    GT+G  P     FLS+ ++   E++S+F+WA+ G WETV+TPD +  REGD FRIGFEP+FVD+TK  +WF V  L+E   +A   V++++SVVQL LFCGLH + F
Sbjct:  134 GNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGAR-RASRVA--HSPDAESDPDELAASASN-DGAMSREHAAADSVDVGVDFEEDG---IPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRS---FLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSF 442          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 1.480e-67
Identity = 139/324 (42.90%), Postives = 193/324 (59.57%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSP---DLADPSPFARQSPRASGTLST--LHEEESDMSDEEEGG--------QGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTY-AEGGTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMF 1190
            GNLAL  G LL IF +H++  S +EA WL K+RAR  +  A R      E    L G      T P   +L D     RQ+   SGT+ +  L E ++  S +  GG        +G    R+ + +  V+ CRE S SAWLH+PH+ELVFL FAFEGAV+S  SA+R +    +FY A+A +V YP+LM A V RT  VRVR + L++F +  ++ G+ G +        S+  +   ++ SLF+WADKGQWETVQT D    R  DWFRIGFEP+F D+T++G+WFIV +L+EWA LA + V+++ + VQ  LFC +H + F
Sbjct:   66 GNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRALRGDVSTSEFPTALLG------TRPQQKNLDDGWSAGRQT---SGTIQSPQLMEHQAVSSWDSTGGGDSTNEQKRGRTNTRAGSSIGQVSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVVRTHRVRVRSDALIVFTSNESDEGSTGTSS-----IYSKTIAGLRKDSSLFAWADKGQWETVQTTDEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTF 375          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.850e-66
Identity = 140/320 (43.75%), Postives = 191/320 (59.69%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSPDLADPSPFARQSPRASGTLSTLHEEE----------SDMSDEEEGGQGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMF 1190
            GNLAL  G+L+ IF  HV+  S VEA W+ K+RAR+ +  + RRG  + E+   L G        P + D S    QS   SG + +    E             SDEEEGG      R  N +  V+ CRE S S WLH+PH+EL+FLFFAFEGAV+S  +A+R++    + Y A+A +VLYPLLM   V RT  V V+P+ L++F +          PS     LSR  S    ++SLFSWADKGQWETVQT + +  R+ DWFRIGFEP+F D+T++G+WFI+ +L+E A LA + V+++ S +Q LLFC +H + F
Sbjct:  235 GNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSG---TWSQQPTMDDGSSAGSQS---SGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNT--RPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPST----LSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTF 542          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 2.860e-61
Identity = 120/239 (50.21%), Postives = 153/239 (64.02%), Query Frame = 3
Query:  534 ESDMSD-EEEGGQGLVPM-RSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAPSRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVE------------------WAALALVGVMIEESVVQLLLFCGLHCVMF 1190
            ++D SD +EEGG GL  + R+E+RLS VA CREHS  AWLHFPHVELVFLFFA+EGAV+S  SA+R + C  +   A  A+V YP+LMF  V RT  VRVRPN  ++F                   LS+ ++ W E++SLF+WA+KG WET +T +  I REG WFRIGFEP+FVD+TKSG WF+  +LVE                  WAAL  +G +I+ESV+QL LFC LH + F
Sbjct:  137 DTDCSDYDEEGGGGLGTLTRAESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF-------------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSF 356          
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 3.390e-58
Identity = 129/312 (41.35%), Postives = 189/312 (60.58%), Query Frame = 3
Query:  261 GNLALVIGILLAIFFIHVVAVSGVEALWLTKKRARENLDSARRRGAPIGELQARLRGGTIICRTSPDLADPSPFARQSPRASGTLSTLHEEESDMSDEEEGGQGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVSSFASAIRNSECPEMFYTAIAAMVLYPLLMFATVFRTLLVRVRPNVLLIFKTYAEGGTNGDAP--SRAGGFLSRFKSSWAENYSLFSWADKGQWETVQTPDRQISREGDWFRIGFEPVFVDYTKSGTWFIVISLVEWAALALVGVMIEESVVQLLLFCGLHCVMF 1190
            GNL L + IL  IF IH+   SG+EA WL K+ A +++  A+RRG P+ EL ARL              DP+  +++S R + T S   E E+D +D EEG    V     ++LS +A CRE S S WLHFPHVEL++L FAFEGAV++  SAIR +    +   A+ A++ +P+LM   V  T   ++R    ++F   A+     ++   +    F S+ +    E+YS+F+W++KG+WE+V TPD +  R  DWFRIGFEP+FVD+T +G+WF V +L+E  A A+VGV+++ SV+QL LF   + V F
Sbjct: 2288 GNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPF-------DPNSESQRSLRTAKT-SGDDEGEADDTDAEEGMPETV---GRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSF 2588          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14488.3449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWS4_ECTSI9.910e-18692.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR60_9PHAE1.450e-18287.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG6_ECTSI2.080e-14979.49Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JD90_9PHAE9.760e-14979.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN93_ECTSI2.730e-7944.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1L9_ECTSI2.000e-7045.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5F3_ECTSI1.480e-6742.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9C2_9PHAE1.850e-6643.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV63_9PHAE2.860e-6150.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN89_ECTSI3.390e-5841.35Liver stage antigen 3 n=1 Tax=Ectocarpus siliculos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14488contigEcto-sp13_S_contig14488:1680..4404 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1196
Hectar predicted targeting categoryother localisation
Exons6
Cds size186
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14488.3449.1prot_Ecto-sp13_S_contig14488.3449.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14488 1776..2329 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462773.1110065-UTR-Ecto-sp13_S_contig14488:1679..17751681462773.1110065-UTR-Ecto-sp13_S_contig14488:1679..1775Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14488 1680..1775 +
1681462773.1400383-UTR-Ecto-sp13_S_contig14488:2329..24001681462773.1400383-UTR-Ecto-sp13_S_contig14488:2329..2400Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14488 2330..2400 +
1681462773.1503844-UTR-Ecto-sp13_S_contig14488:2669..30861681462773.1503844-UTR-Ecto-sp13_S_contig14488:2669..3086Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14488 2670..3086 +
1681462773.1607351-UTR-Ecto-sp13_S_contig14488:3419..35491681462773.1607351-UTR-Ecto-sp13_S_contig14488:3419..3549Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14488 3420..3549 +
1681462773.1712942-UTR-Ecto-sp13_S_contig14488:3749..39521681462773.1712942-UTR-Ecto-sp13_S_contig14488:3749..3952Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14488 3750..3952 +
1681462773.1815588-UTR-Ecto-sp13_S_contig14488:4311..44041681462773.1815588-UTR-Ecto-sp13_S_contig14488:4311..4404Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14488 4312..4404 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462773.1193519-CDS-Ecto-sp13_S_contig14488:1775..18671681462773.1193519-CDS-Ecto-sp13_S_contig14488:1775..1867Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14488 1776..1867 +
1681462773.1299758-CDS-Ecto-sp13_S_contig14488:2235..23291681462773.1299758-CDS-Ecto-sp13_S_contig14488:2235..2329Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14488 2236..2329 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14488.3449.1

>prot_Ecto-sp13_S_contig14488.3449.1 ID=prot_Ecto-sp13_S_contig14488.3449.1|Name=mRNA_Ecto-sp13_S_contig14488.3449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MTQLQFLATLSLVDYVMDEDSWFADFVTGLRWINLWWPAEVGQNIASDEC
AFEAGATLRWS*
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mRNA from alignment at Ecto-sp13_S_contig14488:1680..4404+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14488.3449.1 ID=mRNA_Ecto-sp13_S_contig14488.3449.1|Name=mRNA_Ecto-sp13_S_contig14488.3449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2725bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14488:1680..4404+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCGACGCGTTGACGCTCGCGGATGGCACTGCCGAAGGAGAGAATCCACC CCACGCCAGCAATCGCAGGCCTTCTGCGACGTTGGCTTTCGTGCTCATGA CGCAGCTCCAGTTCCTTGCGACGCTGTCGCTGGTTGACTACGTCATGGAC GAAGACTCCTGGTTCGCCGACTTCGTCACCGGTCTCAGGTGTGACAAAGA ATGCATGCTTGTCGCCGAGTTTTATATTGTTTTCGCCATAATTACCCTAC CGTCGGTGTAAAACGCTGCTCGATGCATCTGAGGTGTCGAATTGAAGATC CGCCCCACCTCTCGGTCTTCAGGGTCACGTTTGGCGGTAGGAGTGTCGTT GACGACAAACTTGGCTGCTAACCAATGATTGCCGAGTCTTTTGTAGGGAA GTGGTAGACTACAGCCTCCGCCATAGGACATAAGACATGTGTCCCATTAG AGGAGCTCTTGCATTTTAAAAGGAAACTTTGAAAACCTCCATACGATCTC GTTTCTCACTCCGCATTTTTTTTGTCGTGTCGCCAACTGCTTATCGAAAC TAAAAGATGGATCAATCTTTGGTGGCCGGCGGAAGTTGGCCAAAACATCG CATCCGACGAGTGCGCCTTCGAAGCTGGGGCAACCTTGCGCTGGTCATAG GAATCCTTCTTGCCATATTCTTCATTCACGTGGTGGCGGTGTCCGGAGTG GAGGCACTCTGGTTGACAAAGGTGAACAAATCGAGAATCTGAGCTTTTTT CTGCGTCGCCAACTTGGTGGGGTATCTTATTTCCCGCAACGGGTGTAGTA CGTTGTAGCTCCGCTCTAACCCCCAAACATGAGCTCCAAGGCACGAGGAT TAACTTCGGCACCCAATCAGCACCTCGCTGTGAAAGCCATTGGCACGGCG CACGTCGGTTGCAAATCTCATTCGTGAACAATGCAACAGCCCATGTCCCC TGCCCTGTTTCCGATCGATCGTCAACTTTTGCCGATGCAGAAACGCGCCC GGGAGAACCTAGACTCAGCACGCCGTCGTGGCGCCCCTATCGGCGAGTTG CAGGCTCGACTCAGAGGCGGAACAATTATTTGCCGGACGAGCCCGGATCT CGCCGATCCCAGCCCGTTCGCCCGCCAATCGCCCCGAGCCTCTGGAACCC TCTCCACGTTACACGAAGAAGAGTCCGACATGAGTGACGAGGAAGAGGGA GGGCAAGGGCTTGTGCCCATGCGCAGCGAGAACCGGCTGAGCCCGGTGGC GACGTGCCGGGAGCACTCTACATCGGCCTGGCTCCATTTCCCGCACGTGG AACTAGTGTTCCTATTCTTCGCGTTCGAGGGGGCCGTGTCGTCGTTCGCT TCTGCAATTCGGAACTCTGAGTGCCCAGAGATGTTCTACACGGCGATAGC AGCGATGGTGAGCTTGAGAGCACTTTGATAGGATCCAGAGGTTTGGCTCC AGAGGTGCTATTTTGCTTGCCATGACCTCGCGGTCGAAGCCATACTGTTT TTTTGGTTATTGGTTCTATCGCAGCCACGTACAGCCATTTCAAGGGATGT TGATGTGTCCATCGAGTGCTAGAAGCCCAGACAACATCCAGGGCGACTTC TGCCGAGAAACTTGGTCGGCACTGCGATTTGCACGGTGGTGCACGTAGCG AGTTCGAGTCATACCGTTGCGTTTCACACCTTCCTCTTTCCCAGTGCCCC TTCCATGTTGTGTTTCTAATCCCGGTTTCGCGAAAAACAGGTCTTGTACC CGCTCTTGATGTTCGCGACGGTCTTCCGCACTCTGCTCGTCCGGGTTCGT CCCAACGTGCTGCTGATCTTCAAGACGTATGCCGAGGGTGGCACGAACGG CGATGCTCCGAGCCGCGCAGGTACGCCCCGCAGTTCTAGGCCCGTCACGC GGCCATGAAACACGCGGATAGAACGGGGTGGGACGGTGCAGAATCGCCCT ACACAACCCCGGATGCAGGGTTTATTATTTTGCTGTTGCTCTGCTTGTCC CTGCGCCTCTAACTTGATCAAGACTTTCGAACATAAGGATCTTATCACCG GCCCTCAAACACTCCACCAGGTGGCTTCCTCTCCCGGTTCAAGAGCAGCT GGGCAGAAAACTACAGCCTGTTCTCCTGGGCAGACAAGGGGCAGTGGGAG ACTGTCCAGACGCCAGACCGCCAGATCAGTAGAGAGGGCGACTGGTTCCG GATCGGGTTCGAGCCGGTGTTCGTGGACTACACCAAGAGCGGGACTTGGT TCATTGTCATTTCGCTCGTGGAGGTAAGTGAGACTCGCCTACGGGTTCGG TCTTGGCATGTTGTTAGCCGTAACGAGAGCGCCGAATGCCCACCGAGTCC GAGGAGGTCCGTTGCAGATGGAGAATAACAGATTCGAAGTTTTGACCGAC GTTAGGTGAGACGTATCTGTACGGCGGGGTCGGCTTGAATCATGTCAGCC GGGTTGTACTTGTCGCGCTGAGATGGTTTCGGCATCGGAAACAGGGTTGA CCATATTGCGCGCGAACGACCGGTGCCTGCTATTGCAAGTCTCTTCGGTA CTACCAAGACAACTGCCACTTGAGCCTCAGAAGATTTCACCAAAGGCCTC TTGCCCTTCCCCGCGCTCTTTATTCTCTGCAGTGGGCCGCTCTCGCCTTG GTCGGGGTGATGATTGAAGAAAGCGTCGTACAGCTTCTCCTCTTCTGCGG CCTACATTGTGTGATGTTCTTCATC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14488:1680..4404+

>mRNA_Ecto-sp13_S_contig14488.3449.1 ID=mRNA_Ecto-sp13_S_contig14488.3449.1|Name=mRNA_Ecto-sp13_S_contig14488.3449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=186bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14488:1680..4404+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCAGCTCCAGTTCCTTGCGACGCTGTCGCTGGTTGACTACGTCAT
GGACGAAGACTCCTGGTTCGCCGACTTCGTCACCGGTCTCAGATGGATCA
ATCTTTGGTGGCCGGCGGAAGTTGGCCAAAACATCGCATCCGACGAGTGC
GCCTTCGAAGCTGGGGCAACCTTGCGCTGGTCATAG
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