mRNA_Ecto-sp13_S_contig1448.3446.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1448.3446.1
Unique NamemRNA_Ecto-sp13_S_contig1448.3446.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: D7G921_ECTSI (LISK family protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G921_ECTSI)

HSP 1 Score: 1628 bits (4215), Expect = 0.000e+0
Identity = 851/889 (95.73%), Postives = 865/889 (97.30%), Query Frame = 3
Query:  177 MDGDDETSASTPDRLNGAGARISLPRRGGPGHNRNWARMSLGGLARGRRRDKEPKGLTPRSPTRRMTLGGAMREQGVGAGGHAYKGRHGIRYEQPHPDAWMEELGEDQAATSLPISTSPGRLASPIAEDSVAAVESEKKALEGRDDTDAKDAGGNDVGTDGHKNSSSVRPTGQGQVPASGAVPLSDVCVDTGTGFGAGPPPMGNVSPSSEYRRGSMSPGVPTEGRLRTQSWTAAAAAPSPPVLRGPFSRARSRSRSPRHRVSMTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSENPSIASTVEEGVNLKEGEDDRPVERGDEDQEDKAVGPFTETSLEMARLRLPHMELGFEEDGFFGIDVRSLIIGREIARGAYGVVHEGKLHPSPRDASVEDGEAGTTAAAT-EAEGGAAANIEGDVERDTLATEVTEGEEEIFHDAAQESVEHAKGEGDTAQEEEEEARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALKLNIDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSETGEDNIVLPQSGPPLPVLTEGAAIAREGNVINASPKGNEQHWLDTEMMEQQIDAMVENAVERALADRRGQDVGLVGGVTGENESAAKFEQMKEEMDALRAACDERDSRISELEVQALRNTSTLKMLSSALEVAYKQLMAVSQPDWSSGANGPQADEAASSERGNFSRQEHDDFDAVEARLSQLGPNL 2840
            MDGDDETSASTPDR+NGAGAR+SLPRRGGPGHNRNWARMSLGGLARGRRRDKEPKGLTPRSPTRRMTLGGAMREQGVGAGGHAYKGRHGIRYEQPHPDAWMEELGEDQAATSLPISTSPGRLASPIAEDSVAAVES+K+A EGRDDTDA+DAG ND GTDGHKNSSSV PTGQGQVPASGAVPLSDV VDTGTGFGAGPPPMGNVSPSSEYRRGSMSPG+PTEGRLRTQSWTAAAAAPSPPVLRGPFSRARSRSRSPRHRVSMTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSENPSIAST EEGVNL EGEDD PVERGDED+EDKAVGPFTETSLEMARLRLPHM+LGFEEDGFFGIDVRSLIIGREIARGAYGVVHEGKLHPSPRDASVED +    AAA  EAEGGAA NIEG+VERDTL TE TEGEEEIFHDAAQESVEHAKGE D AQE   EARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALKLNIDWPLKVRIASDMTDGLQ+LHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEP ERPTAEDAFNWLQDLV+ETGEDNIVLPQSGPPLPVLTEGAAIAREGNVINASPKGNEQHWLDTEMMEQQIDAMVENAVERALA+RRGQDVGLVGGVTGE+ESAAKFEQMKEEMDALRAACDERDSRISELEVQALRNTSTLKMLSSALEVAYKQLMAVSQPDWSSGANGPQADEAASSERGNFSRQEHDDFDAVEARLSQLGPNL
Sbjct:    1 MDGDDETSASTPDRVNGAGARLSLPRRGGPGHNRNWARMSLGGLARGRRRDKEPKGLTPRSPTRRMTLGGAMREQGVGAGGHAYKGRHGIRYEQPHPDAWMEELGEDQAATSLPISTSPGRLASPIAEDSVAAVESDKQAPEGRDDTDAEDAGDNDAGTDGHKNSSSVLPTGQGQVPASGAVPLSDVVVDTGTGFGAGPPPMGNVSPSSEYRRGSMSPGMPTEGRLRTQSWTAAAAAPSPPVLRGPFSRARSRSRSPRHRVSMTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSENPSIASTAEEGVNLTEGEDDGPVERGDEDEEDKAVGPFTETSLEMARLRLPHMDLGFEEDGFFGIDVRSLIIGREIARGAYGVVHEGKLHPSPRDASVEDEDEEQAAAAPREAEGGAATNIEGEVERDTLVTEATEGEEEIFHDAAQESVEHAKGERDAAQEXXXEARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALKLNIDWPLKVRIASDMTDGLQYLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPAERPTAEDAFNWLQDLVNETGEDNIVLPQSGPPLPVLTEGAAIAREGNVINASPKGNEQHWLDTEMMEQQIDAMVENAVERALAERRGQDVGLVGGVTGEDESAAKFEQMKEEMDALRAACDERDSRISELEVQALRNTSTLKMLSSALEVAYKQLMAVSQPDWSSGANGPQADEAASSERGNFSRQEHDDFDAVEARLSQLGPNL 889          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A6H5KGI4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI4_9PHAE)

HSP 1 Score: 744 bits (1920), Expect = 7.590e-258
Identity = 391/423 (92.43%), Postives = 398/423 (94.09%), Query Frame = 3
Query:  963 MTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSENPSIASTVEEGVNLKEGEDDRPVERGDEDQEDKAVGPFTETSLEMARLRLPHMELGFEEDGFFGIDVRSLIIGREIARGAYGVVHEGKLHPSPRDASVEDGEAGTTAAATEAEGGAAANIEGDVERDTLATEVTEGEEEIFHDAAQESVEHAKGEGDTAQEEEEEARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALKLNIDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVER 2231
            MTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSENPSIAST EEGVN+ EGEDD PVERGDED+EDKAVGPFTETSLEMARLRLPHMELGFEEDGFFGIDVRSLIIGREIARGAYGVVHEGKL+PSPRDASVEDGE    AA  EAEGGAAANI+G+VER TL TE TE  E+IFHDAAQESVEHAKG GD        ARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMV MELCTNGALREALKLNIDWPLKVRIASDMTDGLQ+LHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEP ER
Sbjct:    1 MTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSENPSIASTAEEGVNVTEGEDDGPVERGDEDEEDKAVGPFTETSLEMARLRLPHMELGFEEDGFFGIDVRSLIIGREIARGAYGVVHEGKLYPSPRDASVEDGEQ-AAAAPREAEGGAAANIKGEVERVTLVTEATE--EDIFHDAAQESVEHAKGGGDXXXXXXXXARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVVMELCTNGALREALKLNIDWPLKVRIASDMTDGLQYLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPAER 420          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A835Z8E8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8E8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.270e-42
Identity = 81/158 (51.27%), Postives = 106/158 (67.09%), Query Frame = 3
Query: 1737 MELCTNGALREALKLNIDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPS-FPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQC 2207
            MELC +GA+REALKL + WPL+VRIA D+   L  L  HG++HRDIKT NVL+D  WRAKLCD+N AID+ S+ K    AGT EFMSPE LL +++  PSD+FS G+  VE++T + P    F  R PQ  FVV+ +E+        P+SF +L + C
Sbjct:    1 MELCVHGAVREALKLGLSWPLRVRIAQDVARALAVLAAHGVLHRDIKTTNVLLDAAWRAKLCDFNLAIDDASAAKLSHAAGTTEFMSPEALLGDDFSFPSDMFSYGVTLVEIITLRAPGVGDFLVRRPQELFVVNPDELAAARPHDVPASFWMLANDC 158          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A7S2WAU8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAU8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.360e-38
Identity = 104/248 (41.94%), Postives = 146/248 (58.87%), Query Frame = 3
Query: 1578 VAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALKLN--IDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQD---FCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPS--FPERPPQTFFVVSEEEIEG---QLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSETGED 2291
            VA+K Q+V +D   ++ +L ELA+LR   H  LV +IG   A +  SD + +A E C+ G LR  L+ N  I W L+V IA D+ +GL +LH   +IHRDIKT NVL+D  + AKLCD+ FA    +   Q       GT EFM+PEV+   EY   +D+F  G+I  EM++ + P  +  F ER P + F VS++E++    Q  P  P S  LL  +CL  E ++RP+AE+ FNWL DL +E   D
Sbjct:   51 VAIKEQKV-QDAHLESYILKELAILRRCNHPKLVAYIG---ACKVKSDVIYIATEYCSGGDLRRFLQTNHIIGWKLRVSIAVDVAEGLAYLHDRSLIHRDIKTENVLLDPNFNAKLCDFGFARVAETKTDQGRPMTMCGTDEFMAPEVIFGMEYNEKADIFGFGIILAEMISRKIPGKAQKFLERQPISGFTVSKDELQAMKEQFDP--PMSLFLLCEECLGDEGLDRPSAEECFNWLDDLANELPPD 292          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A7S2AUQ5_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AUQ5_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.830e-37
Identity = 99/267 (37.08%), Postives = 149/267 (55.81%), Query Frame = 3
Query: 1578 VAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVM-----------VAMELCTNGALREALKLNID-------WPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSP-SFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSETGEDNIVLPQSGPP 2321
            VAVKIQQ+PE+E E +NL  EL+ +R+ +H +LV F G A  +E                  + ME C  G L ++++L +        W L++RIA ++   L++LH+  IIHRD+K+ N+L+D  W  KLCD   A+  ++  + ++  GT   M+PE LL  EY +P D+FS+G++F+E+ T ++    SF ER P   F    +EI G      P SF  L  QC   +P  RP+A+DA  W++DL  E  E+   LP + PP
Sbjct:  118 VAVKIQQLPEEEVELSNLKSELSFMRSIEHENLVHFSG-AFRIEPPLPEAANLPFTNVTGFGIVMEYCQVGDL-DSVRLKVASGEVELCWALRLRIAREIATALRYLHEREIIHRDVKSQNILLDNNWTTKLCDLGVAVAMDADFRLEYTGGTECMMAPEQLLGMEYSVPVDIFSMGLVFLELTTLKKVGDASFMERLPNNNFECDVDEIRGASPADAPPSFVELIVQCCDGDPDNRPSADDAVAWIEDL--EASEN---LPLTIPP 377          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A8J2SFR9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFR9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.320e-36
Identity = 96/225 (42.67%), Postives = 127/225 (56.44%), Query Frame = 3
Query: 1629 LLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALKLNID--WPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFA--IDENSSIKQDFCAGTAEFMSPEVLLSE--EYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSETG 2285
            L  E+ MLR   H H+V F+G         D   +  ELC  G L   L+ N +  WPL++R+A D   GL +LH+ G++HRD+K  NVL+   WR KLCD+  A   DENS  K     GT E+M+PE+LL E   YGL +DVFSLG + VE+ T +E   +   R  +  F V ++ +  +L  G P SF  L  QCL  E  ERP AEDA  WL++L SE G
Sbjct:  197 LAQEIRMLRGCDHEHVVRFVGVV-------DGTTLLTELCAGGDLLRLLEGNAELGWPLRLRLAGDACRGLAYLHERGVMHRDVKAENVLLSQDWRGKLCDFGMARDADENSQCKT--LCGTPEYMAPELLLGEVEAYGLAADVFSLGCVLVELAT-REACATCLVREARNMFEVDDDILRAKLA-GAPDSFVELAVQCLAGEDYERPLAEDAQAWLEELASEAG 410          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A4D9DGA0_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGA0_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.420e-34
Identity = 113/345 (32.75%), Postives = 160/345 (46.38%), Query Frame = 3
Query: 1563 EEARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVE----------------RGS----------------------------------------------------------------------DT---VMVAMELCTNGALREALK--------LNIDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDG-CWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLS---EEYGLPSDVFSLGMIFVEMLTGQEPSP-----SFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSE 2279
            E+   VAVK+Q+VP DE+EQANLL EL++L    H  LV + G A+  E                RGS                                                                      DT   V++AMELC +G+LR+AL         L + WPL+VRI SD+ +GL FLH HG++HRD+KT N+L+    +RAK+CD+ F    +S        GT EF +PE LL+    +    +D+FS G++  E++TG+ P       SF +R P+  F V  EE+E  +LPG P S   L  QCL  +  +RPTA +A+ W ++L +E
Sbjct:   44 EKEEEVAVKVQRVPSDEQEQANLLIELSILHGLIHPRLVRYFGAALLSEADILTRDKWRPLLRGPRGSKWDHCGEEQVDPAKRREXXXXXXXXKEGXXXXXXDVKEQMHAWVESEAIRKEEMDATTSSPATTPASPSADTASLVLIAMELCGHGSLRDALSPSLPHQSPLPLSWPLRVRIVSDVAEGLTFLHAHGLLHRDLKTSNILLTHPLFRAKICDHAFVSSSHSPDLLSITCGTFEFQAPEQLLNGPESKITGKADMFSFGVVMSELVTGKIPGSGQGQDSFLQRRPEELFEVRGEEVENHVLPGCPPSLLALTLQCLAQDAEDRPTALEAWEWARELWAE 388          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A812NC24_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NC24_9DINO)

HSP 1 Score: 144 bits (364), Expect = 8.690e-34
Identity = 94/262 (35.88%), Postives = 139/262 (53.05%), Query Frame = 3
Query: 1578 VAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALK---LNIDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSP-SFPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSETGEDNIVLPQSGPPLPVLTEGAAI 2351
            VAVK Q + E+  E+  L+ EL +L   KH +L+ + G +     G + + +  EL   G L++ L      + W L+VRIA D+   + +LH+  ++HRDIK  NVLID  WR  L DY FA    ++     C GT EFM+PE++  E+Y    DVFS GM+ VEM+TG+ P    + ER P+  F     ++E  + P  P S +    QCL  EP +R  ++    WLQ+L +E   D     ++ P    +  GAAI
Sbjct:   58 VAVKKQTISEENPEKF-LMTELGVLHGVKHPNLIRYYGASF---EGKE-IFIITELMVGGELKQLLDKEDFKLPWKLRVRIARDIAAAICYLHEQQLLHRDIKPDNVLIDDDWRPVLSDYGFARKRQTAAAMTIC-GTEEFMAPEMIWGEDYDERVDVFSFGMLLVEMITGRRPGKHGWLERTPRNKFNFEMADLEAAIPPECPDSLTECVKQCLAYEPDDRLDSDSMLEWLQELYAEMEGD-----EAAPKPTDILGGAAI 308          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: A0A7S2GXN1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXN1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.240e-33
Identity = 90/252 (35.71%), Postives = 138/252 (54.76%), Query Frame = 3
Query: 1572 RSVAVKIQQVPEDEEEQA-----NLLGELAMLRN--HKHSHLVEFIGTAMAVERGSDTVMVAMELCTNGALREALKL------NIDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPS-FPERPPQTFFVVSEE--EIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSE 2279
            RSVAVK+Q +P+ +EE A     NL+ EL++LR+  H+  ++V+F+G      R  + +   M L + G LR+ ++        +DW    R+  D + GL +LH+H ++HRD KTPNVL+       LCD+ F I  +S  K + CAGT EFM+PE+ + E++ LP+DVFSLG+   E+ T   P  + F  R P+  F    E   +   +   +P   + +  QC   E  +R +A  A   L DL+SE
Sbjct:  109 RSVAVKMQPMPQPDEEWAQEIVDNLVCELSVLRSICHRSPYMVDFLGAG----RVGNDIFSVMGLASRGDLRQVIEKCEVGEGRMDWVSLARVLRDASYGLAYLHKHELLHRDFKTPNVLVQEDGSGLLCDFGFTIWADSPAKLETCAGTEEFMAPELCMGEDFHLPADVFSLGITICEVATRIRPGDNDFLYRSPRNMFAFEPEVPHVHAVITEDFPLMLASIAEQCCQFEENKRLSASAAATSLHDLISE 356          
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Match: D7G911_ECTSI (LISK family protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G911_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 3.620e-32
Identity = 85/247 (34.41%), Postives = 139/247 (56.28%), Query Frame = 3
Query: 1629 LLGELAMLRNHKHSHLVEFIGT--AMAVERGS-DTVMVAMELCTNGALREAL---KLNIDWPLKVRIASDMTDGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPS-FPERPPQTFFVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVSETGEDNIVLPQSGPPL--PVLTEG 2342
            LL EL++L+  +H +++E+IG    +A  RG    V +  E    G L + L   +  + W  +++IA +  + L++LH   +IHRDIK+ N L+DG W  KL D+  A + +S+ K   C GT E+M+PE+L  E +  P+D+FS GM+ +E++T ++   + F  R P   F +  EE+  +  P  P S   L + C+  E  ERP+A++   WL++L+SE   D   +P+   PL  P + EG
Sbjct:   64 LLRELSVLKYIRHQNMLEYIGAYNVIAKSRGQLHAVYIITEYAQGGDLLKLLLRTETPLGWRFRIQIAKEGAEALEYLHSQQLIHRDIKSSNFLLDGDWHCKLSDFGMAREVSSNGKMTIC-GTDEYMAPEMLFDESFSYPADMFSFGMVLLELITRKKIGENGFARRTPAKLFALEAEEVRQESPPDAPDSLLNLAAMCMEYEAEERPSADETRAWLEELLSELPNDTCAIPE---PLEVPAIPEG 306          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1448.3446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G921_ECTSI0.000e+095.73LISK family protein kinase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KGI4_9PHAE7.590e-25892.43Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z8E8_9STRA3.270e-4251.27Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2WAU8_9STRA1.360e-3841.94Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2AUQ5_9STRA3.830e-3737.08Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A8J2SFR9_9STRA2.320e-3642.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9DGA0_9STRA2.420e-3432.75Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A812NC24_9DINO8.690e-3435.88Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S2GXN1_9STRA8.240e-3335.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7G911_ECTSI3.620e-3234.41LISK family protein kinase n=1 Tax=Ectocarpus sili... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1448contigEcto-sp13_S_contig1448:4207..15145 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1647.5
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G921
Model size3588
KEGG koko:K05391
KEGG TC1.A.1.5
KEGG Pathwayko04626,map04626
Hectar predicted targeting categoryother localisation
Exons18
EggNOG free text desc.MAP kinase kinase kinase activity
EggNOG OGsKOG0198@1,KOG0198@2759
Cds size2667
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1448.3446.1prot_Ecto-sp13_S_contig1448.3446.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1448 4952..14154 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462772.7721238-UTR-Ecto-sp13_S_contig1448:4206..49511681462772.7721238-UTR-Ecto-sp13_S_contig1448:4206..4951Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1448 4207..4951 -
1681462772.9488637-UTR-Ecto-sp13_S_contig1448:14154..142551681462772.9488637-UTR-Ecto-sp13_S_contig1448:14154..14255Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1448 14155..14255 -
1681462772.9592726-UTR-Ecto-sp13_S_contig1448:15070..151451681462772.9592726-UTR-Ecto-sp13_S_contig1448:15070..15145Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1448 15071..15145 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462772.7856617-CDS-Ecto-sp13_S_contig1448:4951..49991681462772.7856617-CDS-Ecto-sp13_S_contig1448:4951..4999Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 4952..4999 -
1681462772.7941847-CDS-Ecto-sp13_S_contig1448:5307..54301681462772.7941847-CDS-Ecto-sp13_S_contig1448:5307..5430Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 5308..5430 -
1681462772.803482-CDS-Ecto-sp13_S_contig1448:5640..57451681462772.803482-CDS-Ecto-sp13_S_contig1448:5640..5745Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 5641..5745 -
1681462772.8137147-CDS-Ecto-sp13_S_contig1448:6178..62891681462772.8137147-CDS-Ecto-sp13_S_contig1448:6178..6289Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 6179..6289 -
1681462772.8237913-CDS-Ecto-sp13_S_contig1448:6800..68691681462772.8237913-CDS-Ecto-sp13_S_contig1448:6800..6869Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 6801..6869 -
1681462772.8330994-CDS-Ecto-sp13_S_contig1448:7365..74581681462772.8330994-CDS-Ecto-sp13_S_contig1448:7365..7458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 7366..7458 -
1681462772.8426015-CDS-Ecto-sp13_S_contig1448:7622..76861681462772.8426015-CDS-Ecto-sp13_S_contig1448:7622..7686Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 7623..7686 -
1681462772.852084-CDS-Ecto-sp13_S_contig1448:8047..81571681462772.852084-CDS-Ecto-sp13_S_contig1448:8047..8157Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 8048..8157 -
1681462772.8650231-CDS-Ecto-sp13_S_contig1448:8545..87011681462772.8650231-CDS-Ecto-sp13_S_contig1448:8545..8701Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 8546..8701 -
1681462772.8735673-CDS-Ecto-sp13_S_contig1448:8998..91601681462772.8735673-CDS-Ecto-sp13_S_contig1448:8998..9160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 8999..9160 -
1681462772.8822224-CDS-Ecto-sp13_S_contig1448:9518..95961681462772.8822224-CDS-Ecto-sp13_S_contig1448:9518..9596Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 9519..9596 -
1681462772.8907406-CDS-Ecto-sp13_S_contig1448:9927..100381681462772.8907406-CDS-Ecto-sp13_S_contig1448:9927..10038Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 9928..10038 -
1681462772.8995278-CDS-Ecto-sp13_S_contig1448:10576..108001681462772.8995278-CDS-Ecto-sp13_S_contig1448:10576..10800Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 10577..10800 -
1681462772.9094548-CDS-Ecto-sp13_S_contig1448:11370..119091681462772.9094548-CDS-Ecto-sp13_S_contig1448:11370..11909Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 11371..11909 -
1681462772.9195397-CDS-Ecto-sp13_S_contig1448:12150..125151681462772.9195397-CDS-Ecto-sp13_S_contig1448:12150..12515Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 12151..12515 -
1681462772.9294538-CDS-Ecto-sp13_S_contig1448:12884..131701681462772.9294538-CDS-Ecto-sp13_S_contig1448:12884..13170Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 12885..13170 -
1681462772.9400713-CDS-Ecto-sp13_S_contig1448:14131..141541681462772.9400713-CDS-Ecto-sp13_S_contig1448:14131..14154Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1448 14132..14154 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1448.3446.1

>prot_Ecto-sp13_S_contig1448.3446.1 ID=prot_Ecto-sp13_S_contig1448.3446.1|Name=mRNA_Ecto-sp13_S_contig1448.3446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=889bp
MDGDDETSASTPDRLNGAGARISLPRRGGPGHNRNWARMSLGGLARGRRR
DKEPKGLTPRSPTRRMTLGGAMREQGVGAGGHAYKGRHGIRYEQPHPDAW
MEELGEDQAATSLPISTSPGRLASPIAEDSVAAVESEKKALEGRDDTDAK
DAGGNDVGTDGHKNSSSVRPTGQGQVPASGAVPLSDVCVDTGTGFGAGPP
PMGNVSPSSEYRRGSMSPGVPTEGRLRTQSWTAAAAAPSPPVLRGPFSRA
RSRSRSPRHRVSMTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSEN
PSIASTVEEGVNLKEGEDDRPVERGDEDQEDKAVGPFTETSLEMARLRLP
HMELGFEEDGFFGIDVRSLIIGREIARGAYGVVHEGKLHPSPRDASVEDG
EAGTTAAATEAEGGAAANIEGDVERDTLATEVTEGEEEIFHDAAQESVEH
AKGEGDTAQEEEEEARSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHL
VEFIGTAMAVERGSDTVMVAMELCTNGALREALKLNIDWPLKVRIASDMT
DGLQFLHQHGIIHRDIKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCA
GTAEFMSPEVLLSEEYGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTF
FVVSEEEIEGQLLPGYPSSFSLLQSQCLFAEPVERPTAEDAFNWLQDLVS
ETGEDNIVLPQSGPPLPVLTEGAAIAREGNVINASPKGNEQHWLDTEMME
QQIDAMVENAVERALADRRGQDVGLVGGVTGENESAAKFEQMKEEMDALR
AACDERDSRISELEVQALRNTSTLKMLSSALEVAYKQLMAVSQPDWSSGA
NGPQADEAASSERGNFSRQEHDDFDAVEARLSQLGPNL*
back to top

mRNA from alignment at Ecto-sp13_S_contig1448:4207..15145-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1448.3446.1 ID=mRNA_Ecto-sp13_S_contig1448.3446.1|Name=mRNA_Ecto-sp13_S_contig1448.3446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10939bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1448:4207..15145- (Ectocarpus species13 EcNAP12_S_4_19m)
GATATCGGGACTTGGGGCTCTGGGAGTGCTTCACGCGTTGTGCCTGAATG TGAGACAAGCCGACACGGGAGAGACGTAAGTAACATCGCTTGGAATGAAT GAAATGATTGTGAGGCGTCACGAACGGACGACCCACCTCTATTCGCGTGT TCGGTCTTGTTGACGACGAAAGTTGTACATGCAGAGAAACCGCCACACAT GAGTGGCAATGTCTGCAAAGTCGTTGACAGTGTTGTTGGTGTGTTCCGTT GAGGTAACCCTCTGTCTTGTTGAGAGCGAAGACAGCGGTGTCTGGTGAAA TTCGGTTGGTATGTACCACGGATTTACTCTCACGAGTCTTGTGCGCACAA GAGAGCAGGGGTAGGTATTCGGGTACCGGTAGACGTCGTGCAGTAGAGCT GCGGTGGAGCGGATTGCATTTCACCGCCCACTGGTGATAATCATGCTCCT TTATACGAGTGATGTCTCGTCACGGAGTCTTGTTGGTTCATCTTGCCGTC TGTAGCAAACCTAGGTAGCCGATGGTGTTTACAACAACGGCATTTCAAAA CCCGTGTTCGAGTTCAAGGGGGTCCTCACCCTCCCTCACCTGAAAGCCCG TGGACAGTCTACATGCCCGCACACCAGGCACGATACGGGCGGGAAGGTAG AAAGCGAGACATGTATTTAGCCAGATGCTTTGTCGGCGGGATCTTATTCT CTGCAGCGGTCGTATCCACAAGAGGCACATACTTGTGAGCAGCCCGGTGT TACGCGTTCCGAGATGTTACATTTTGACATTATACTTCCAGCTCAATTTT TAAACTGGATGACAACCTACAGCCCAACGAGATCTGTGACTGATACACCC TGGACGCATGTGCGTTTGTCGTGCCGTCCTTTCACACTAGGTAAGAAATT CCATTGCCTTGTGCTCTACCTTCTCTCCTAGAGCAGTGTGGTCGACCTGT GGCGTAACACGGATCTTCCGTTGCACAGCTTGCTGAGAGACATGGATGGG GACGACGAAACGAGGCAAGTGCTACTCCTGCTGCTGCTGTTGTACGCACA GCAGCTTCAAGTCGTCAAGGACACCGACCGACATGCCGTCTACAGCAGTA GTAGGCCGCCAAACCCCAGCAATCAGGCTAAAGCCCGCGACACACCACAA ACATCTCTCTCTTAGCGCGTGGAACAACTGAGCGTCCTGATGGTTCAAAT CCTGTTACAGCAATACGTGCAAACAGAGGATGGCGTTTGATGTTGAGGTG CTTCTACCTCCTCTACAGCGGTACGCGTCTCCGAAAGTACCTGGTACTCA GTACTTCACTCAATTTTCTCAGCAGCAGTGTACAGCAGTAACGGCCGCCG GCGCGTTGCTTTTTTTGTATTTGGAGACGATGTGACCAGAAACATAAATT CTGAGAAGGAACACGATGTTATCCGGCTTGTTTGTGCACATTTCGTTCAG CCCCTCAGTTCAACAGCGAGCGTTCTTGTTTTTCGGCCGGGAGCAGCCAT AGTTTTAGCCTAAACGCTGTGCGTGTCTCTTGGGGACCATTTGTGGCCCT CCGTTGTATGTTGTATCCTGCCTCGGATGACACTTGCTCTCTGACCCTGG CTCTCTGATGGTCTGATGTATACTTACGGATATGGTGTACCAATCTGGTC ATGCCGTACCCATGTGTTCGCCGTCACGTTCTCTTGGGTGTACACAGTAA CCCGGCCATCGCTGAAAAATGGGGCTATCTCAGGGAAATATGAAACATGC GAGTAGAGTTACTTGTGTTCGACAGCCGTACGTAGGCCCGTATGCCGTGG ATCAAACGTACGAACGGCGGCCCAGGCGTCGCGTGTACAACCTAACCTCA TGTGGTAGCAAGCCTTTCTCTTGGTTCTCTCCCGGCCGTGTAGTCCCTCC CTCCGCGTGACGTTTGTATTTGTAACGCACCGGGGTTTTGGCTGCTCTGT TTTTGCCGAATGAACAACTGAAAAGTGCGTCAACACCAGACCGCCTTAAC GGGGCGGGTGCGAGAATATCGTTGCCGAGACGAGGCGGACCGGGCCACAA CCGCAACTGGGCCAGAATGTCGCTCGGCGGACTTGCCCGTGGAAGGCGAC GTGACAAGGAGCCCAAAGGTCTGACGCCCCGCTCGCCGACGCGTCGGATG ACGCTCGGAGGGGCCATGAGGGAGCAGGGCGTGGGCGCCGGTGGGCACGC GTATAAGGGGCGGCATGGCATCCGTTATGAGCAGCCGCACCCGGATGCTT GGATGGAGGAGGTGACGATGGAGTTGGGATTTGTGCCGATGGCTTACAAG TAGGGTTACGGCGGGCGCCGTTGGTTTGAGTTGATTTTCGCGCTCTCTGG TGAGGTTTGGCAAGGGGGGAGGGGGCGTGCTCAAGATCGGCAGGCGACGG CCTGTTGGTGTGCAAATATTGCGTGTGACGTGCGGGAACCAGTGATTTGC ACGCGTGTTGGCTCCCGGACAAGAAGCAACAGGCGTTCAAAAATATGTTC GCGTGTGATTTGCCCACGGCGATGATGCGGCAAGTTCCCTGCCTTTTAGT GATGTCTGCATTGCTGCTGGCGTTACCATTGTGAATCCAATTCTGCCGTT GGTTGTGCCCGCGCGCCTACATGATCACAGCTCGGTGAAGACCAGGCCGC GACTTCCCTTCCCATCTCAACGTCGCCGGGGCGGCTGGCTAGTCCTATCG CCGAGGATAGTGTCGCAGCTGTTGAAAGCGAAAAAAAAGCCCTGGAGGGA CGGGACGACACAGATGCGAAGGACGCTGGCGGCAACGATGTTGGCACGGA TGGACATAAGAACAGCTCTTCGGTCCGGCCAACCGGGCAGGGGCAGGTTC CCGCGAGTGGAGCGGTACCACTAAGCGATGTTTGTGTCGACACCGGTACC GGCTTCGGGGCTGGTCCGCCCCCGATGGGCAATGTCAGCCCGTCCTCAGA GTATAGACGTGGGAGCATGTCCCCCGGTGTGCCTACGGAAGGAAGGTGCG CCGTCGAACGATAGACACGGGATTGTTTAAGGATGTCAGAATTGGTTCGT TGGCGGGGCTCAGGTCACACACCTGGCCTGCCCTTTAGCACATCGCGCTT TGAGCACCTGTTGAATGCCAGAGACGTCGTATCCTAGGCGTCCCGTTACA AAACATCACCAGCAGTCTGTAGCTGCGTTAGCCACCACTCTGAACGAATT TTGATTTTTCCCTCCATCCACGCCTTGCCATCGCAGACTACGGACACAAT CGTGGACTGCTGCCGCCGCCGCTCCCTCACCGCCGGTTCTCCGAGGCCCT TTCTCGAGGGCACGCTCACGGTCCCGCTCGCCGCGTCACAGGGTGAGCAT GACTCTCGGCCCGACTGGGGGCTTGCATTTGGCTCGAAAGCCTGAACACA ACAGGTTCAGCAGCGGGGGAACAAGCATGGGAGCTGACCGAAACATAGGG CTGTCTGAGAACCCGAGCATAGCAAGCACGGTGGAGGAGGGCGTGAATTT GAAAGAGGGGGAAGATGACCGTCCGGTTGAGAGAGGGGATGAGGATCAGG AGGACAAGGCCGTCGGTCCGTTTACAGAGACCTCCTTGGAGATGGCGCGG TTACGCCTGCCGCACATGGAGCTGGGCTTCGAAGAAGACGGATTCTTCGG GATTGACGTGCGATCCCTGATTATCGGGAGGGAAATCGCACGAGGAGCTT ACGGCGTGGTTCATGAAGGAAAGCTACATCCGTCGCCGAGAGATGCGAGT GTTGAGGATGGAGAAGCAGGTACCAGTATTCTGCGATCAAGATGCTCTTC GCCGAATGTAGACATATGTATTAATGTGGCCGCCGCGTCGGTGTCATGGT ACGGAACGCCTTGCTTCCATTTAGCCAGACTGGTGACTAGATTGGGCCTT GCTCGCCTATGCCACCTGTCGCGGGGTTGAACTGCTGTGGGAGTTACGTT TGATCAGCGAGTCGATGCAGGGTCTGGTAACCAGAGCCATGCCCACTTCT CATGTCCTTCCGTGTAAATGCTCTCTGTGGACCCGCCAATATTGCTAGGC GGGAAATCGCGTAGCTTGACTCCTCCTCGTGCATAGCTGGATCAAATCGC GTAAAGTTGTTTGTGTGTTATGTAAAGTTGATGCGGTTGATCCTTGCCAT AACTTTCCCCACATGTTATGGTGTGCACGCTGTACCCATCCCACATCCCA AGCTCAACATTCAATGTAGACGGAGTCGTCGCGACTCCTTCTGCTCGTGT ATCGTAGCCGTCTCGTGGCGCATGGCGCATGAAGGACGTTTGCTGGAGTT TCACGCGCCGCCTTGCTTTGTCCTTTCTACGCTTGCCATTCGAAGCAGCG GCTGCCACGGAAGCAGAAGGTGGCGCGGCTGCCAACATAGAGGGAGATGT GGAGAGGGACACACTTGCAACGGAGGTGACGGAGGGCGAGGAGGAAATTT TCCATGACGCTGCTCAAGAGAGCGTGGAACACGCTAAAGGAGAAGGGGAT ACTGCACAGGAAGAGGAGGAGGAGGCGAGGAGCGTGGCAGTGAAGATTCA ACAAGTACCCGAGGACGAGGTATGTTGGCAGACGCTGGGCGGTACAGATA CAGGGTGTTTATTTGGCAGAGCTGCCCAATATCTCCGTACAACATAAAGT TGCGGGCGCGCATTTTGTGAGATTCTAGCGTCAAAGTTTACGGATTGTCT CCTGGTCACTCGGCGTAGGATATTCTTGTAGCGATTTCTGGCCAGATTTG CGCGGCAGCAAAGACGGTAGATCGTACCTCCGCCCGTCAGCCCATCGGCT AGTTGGCATTGAGCTGCTCGTTGGGAAAGACCCCTCGAGCTCCAGGTTCC CGATAACGTCGAGCTGAATATCAAACCATGTTTTTATGCACCACAGGATT GTATGTTCGGAGCGTTTCTAGCTGGATGATGAGTCTTGTCTTTCGTGCGG CCGCAAGTGGAAGCAGCCGGTGAGCCGATCACAAGCTAACAAGAATACCT CCCACCCGTACAAGACAAATATGGGTGGGTCTTACGTTAATCATGCTATC TACCGTACGTGTTTCATGGTGGTGGCTGTGGTTGGTGCGAAACTGCCATG AACGCAGGAAGAGCAAGCCAACCTGCTGGGGGAGCTTGCGATGCTAAGAA ATCACAAGCACTCGCACCTCGTTGAGTTCATCGGAACGGCTATGGCCGTG GAGAGAGGTTCCGACACGGTGAGAGACCAGTCAAGAGCAATCATGCTTTC CTGTGCTAGCCTGTAGCGGACGGGGTATGCATAGTTGCCAAGGTTGACCT CAAGTAGCAATGTACATGATGACATTGCGGGAAGTGTGAGGAGCAGGGGC TGATCTTGGGTCGGTCAAAGAGGTTGTACATTCTTTGTCAACAAGCTCTC GACGCGATGTTTAGCTTTTACCGGCGTGTCAAGCTAGATGTGTTTCCTAC TTCGATGAACGATCGCTTGTCTTAAGAGGATTGGTTGTCATTGGTCGGCT AGATGTCGCAAATATTTTTTTCACGAGTTATTTGTTCCGTTCTGTGCAGG TGATGGTGGCGATGGAATTGTGCACCAACGGGGCGTTGCGAGAGGCGTTG AAACTCAACATCGACTGGCCACTCAAGGTACTTGCTCGCTGAGAAATTAG TGTTGTATTTATGTGTCGTGGGTGACTTGGTTCTACGGGAAGCGGAGGGG CTAGTTGTTTCGTCCCTGAGGCATCGGTGCTCGGCTCGGGGGTACTGGAA CTCACCCTCTGACGTGAGCAGTCTGTTTGTGACTTGTCTTTTCTCTCGTC ACCCGTTCCTATTGTGCATCAAAGGCCTCATGTGTCCTCTCGTTGGTTGT TTTGGTGGAGGACCTAGGGGGTGAGGAACATTGTAAATATGGTTTTCCCT CGTGTCTAGTTCTGATACGCGGTGAGGGCACCACATGGCTAATTACTTCT GTGCCTACACCGCTGCCCGTTTTCCGGACGCGAAGGTTCGAATCGCGTCA GACATGACGGATGGGCTGCAATTCCTGCACCAACACGGTATCATCCACCG AGATATCAAAACCCCCAACGTTTTGATCGACGGCTGCTGGAGAGCGAAGC TCTGCGACTACAACTTCGCCATCGACGAGAACAGCTCCATCAAGCAGGTG CGACGTCTGTTTTACCCAAACCCGTCTGGACGAAGCAACACGCACGTGTG AAGTTCTGAGTTCTTCGCTGCAGGCGCTGAGCGCAGTGAGCATCGGCTGG TGGGGCCTTGAGTTCCCCTCCCCTCCGAATGTCCCCGACCGAGAGCTCTC TTCCCACCAGCCCTTCTCTGTCATTTGTCGAACGATTGGGCGTTGGGGCA CTATTTCTGCGTCGAGCGATACTCCACCTACGTTTACGTTTGCTGTACAT TGTTGTCACACTCTCATCGCTGGCTGTGTCCGCGTTTGTCGCAGGACTTT TGCGCGGGAACGGCGGAGTTCATGTCTCCCGAGGTGTTGCTCTCGGAGGA GTACGGGCTACCGAGTGACGTCTTCAGCCTGGGCATGATATTTGTAGAGA TGCTTACTGGTCAGGAACCAAGCCCTTCCTTCCCGGAGAGGCCGCCACAG GTAAGTCTGGGCGTCGCAAAGACGACCGACCCTTTGAGAGACAATATTTG TTGATGACTCGATAAGCGGCGACACCTCTCTCTTTTGTGTACTCGAACGT AAGGAGCCCTTGGACGTATTTTCAGTACCAGTTATACACTCATAGTATTG ATGGACCCCGAGGTGAAAATCTCCAGTTTCAGCATGGTCCCTTCGAGTCG AGTGGAAGCTACTCCCTCGCGGTTGGATTTGATGAGTTTGCCGGCGTGTG AGATGTTTTCTACACTCCCATCAAAGTTGTGTGTCCGGTGTCGATCGCAC TTGACTTGTTTTGCCACTGGTTTGCCCCAACCCTCTCCCGGCGCTGACGT TTGCGCGCCATGTCTCGATGTGCCCATGCTGTTGGCAGACGTTCTTCGTC GTTAGCGAGGAGGAGATAGAGGGGCAGCTGCTGCCAGGGTATCCTTCGTC CTTTTCGCTTTTGCAGTCGCAATGCCTCTTCGCCGAACCAGTTGAGAGGT GAGCGAAGATGTTGGAGACAGCAGCAGTGCTAGTAGAGGGGTGGTGCTGT TGTTTTTGACGACACCCGTGAGGCTGTTCGTTTGATGTGTAGGTTGCTGG CGTGGCATGCACGCCACGGCGTTGAGGCTGCCGAAGGTCCTGGTTGTCGC CGTGGCATCGGGTCAAGTCCCCGTCCGGAAACCGTTCCGTGAGTGTCGTC TGCCACTTGACCCCTGGGCACCAAACGAGAGACATGTTATCAGGTTTGGG AAGGGTTGATTGATGAAGGAAAAGCTATCGTACCCTCTCACCCAAACTTG GTGCGATATCCTGGTGTGTGTGCTGTACTGCTGTCCTGGCGTTTGGTTTG TACCGGCAGACCCACGGCGGAAGACGCTTTTAACTGGCTGCAGGATCTGG TTAGCGAGACAGGCGAAGATAACGTGAGTTCATCCACCCTGTCTCGTACC TGCTTGTGCTCCCACAGCACATTTGGAGAGTATCTGTTGGAATGCGCTTT GGGTCCTAGGGTGTGATATTGCTACTCTTGATGGTTGTATGACCGTTTCA GCTCGATTTTGAGTCGCCCGAATGTTGCTCGTTGCAGATCGTCTTGCCGC AGAGTGGCCCTCCGCTTCCCGTGCTGACAGAGGGAGCGGCCATCGCTAGG GAAGGGAACGTCATCAACGCTAGTCCGAAGGTGAGAAAATGCAGACGTGC AGGGGTTCCTGGCTCTTGTTGAGGATGGTGATGGTGATATTCTGGTGGTT ATCGGCACCTGTGTGCGTTTTGGCCCTCGGAAAAGTTTTGTGGGTCTGCG CTTTTATTCACGTTTTGGTTAGGGAAAGGGACGTCGTTGCTATCGACCGA GGATCAGGCTATGTCATTCATCCATTCCACCCCAGTGCCAACTTGTCCTC CCTTGGAACGCGCTTGAGACTCGTGTTTTCTGTTTGTTGGAGTCTAGGAG ACTCGTCTCGCAGCGTCGAGTTCGGATGCCATGTGAAAGAGATAAAAAGG ACTTGTACCGGGCGGACAGCGCGGCGAAAAACTGTTTCGCTCAAACAGCA AACACCCCAAAAGCTGTGGTCTGTGAACGCCAAATACAGGGAGTTTGTTG TAGCATAGTCGACAACAGAACGCCGCGTTGAAATAAGTTCCTTCTTTCGC TCCATGTCCTATCGGGGACGTCACAGGGCAATGAACAACACTGGTTGGAC ACGGAGATGATGGAGCAGCAAATAGACGCCATGGTGGAAAATGCGGTATG TTCACGCAACGTCGATAGGAGCGATGCTGCAACAGTAGCAAAACAGGACT ACTGTCGTTGTGCACTGGGGTACCATGTGTGGCTTTCAAGCCAGATGGAA AAATTAGTTTTCGGATCACGGTTTAGTCCTCAGCTAGGAAAAAATGTTAT CAAGTGCAGAGTCTGTGCTTTGGTGTCACACAAGCAGGAACTCCTTCGGC CGTACCAGTACCGGTCTGAGAAGGGTCTTGCGAGCTGTGTGTTGCTTGGA AGGAATCAGCTAAAAGACGTGTTTCCCTAGACGGGCTTGTAGCAAGCGTT GCCCACAAGATAATGTAACGTCGAGGCCGTCGGGCCTGAAATGTGGCGAG TTGGCGCACGTACGTGGGCATACTTTCCCCAAGCCAGCGGGTAGACTGTC GTGTTTAATGCGTAATCGTTCCGGCAAAAGTTCTTCAACCGCTTGTTTTT AACGTGCGAAGATCTCGAGACAATGTATACCGCACGTTGTTGTTTGCGGG ACGCAGGTGGAGCGTGCCTTGGCAGACCGAAGAGGCCAGGATGTTGGTCT GGTCGGCGGGGTGACGGGAGAGAACGAAAGTGCGGCAAAATTCGAGCAGA TGAAGGAAGAGATGGATGTGAGCACGTGCAGGATTTTGTTTTGTAGTTGT GGAGAGTGTTGCATGCCCTGCGACGGAGTGCGATTGTTTTGAGCAACACT TGCTCTGCTGGTCCGGAATTGCCATCCTGTAGTGTAATTCAAGTGCTTCC ACGGAGGGTGACCTGTGACATGCAATTGACATGGCACTCGCCTCACTACG CCAACCTCGGTCGCATTGATTGATGTTTGTAATGTGCGCTTCACGATTCT GCCCAAGACCGGCATTGAAATGTACGAATCGTCACGGACTGGCTTGTAGG TGTGCTTATTCCGCTGCGACGGAGAAGCGCTCACTTGTCATCACCCCAAC CGATTTTGGTGTGCGATAATTGTTGATTTTCCTCCCATTGTACACGGTCT GATCTGCCGTCGGCCTAACCTTGGCGCATGTTGTTTTTTTTAACCTGCAG GCACTCCGAGCTGCTTGCGACGAGCGAGATAGTCGCATCTCAGAATTAGA AGTGCAGGCCCTTCGAAACACGTCGACGCTCAAGATGCTGTCGTCAGCTT TGGAGGTAAGCTTCATGCCCCGATCGACCAATCCGACGCCTGTTGTCTCC TGATAAGTTGGAGCGAATGCACTCTACGCTATGGTAATTCATTTGACCCA TTTTTTTAGGGGAGTCCTGCCATTTGCCATGTGCACGCACATACTGTGCA GACCCGACTCGTCCTTCTACTGCTAAACGTGGCGTTTGATGAACAATATT TTTGCCGCACCGCAGGTGGCGTACAAGCAGCTGATGGCTGTATCACAGCC CGACTGGAGCTCCGGGGCAAACGGACCCCAGGCGGATGAAGCAGCATCTT CCGAACGTGGAAACTTCTCCCGACAGGAGCACGATGATGTGGGTTTTGCG CATTGGTTCTATCGGTGATGTACTTGCTCTGTCTGTCACAACGTGTTCAT CTAGGTTTTTCTTGCATGGCCATTAGCCCGTACAGTGTAGCGCAAACGCC CATCGTCAAAATGCGGGGTTGACTTAGGTTGCCCTGCTCTGTGGTGGTTG ACCATGCACCAAGCACCAAAACGCCAAGCCCAACGCGACAGCTCAACAGC ACTCGTAGTAAACTGTACTACACCTTCTTGACCCACCGCCATTTTTTTTC TGTTCTCAAATCAAACACCTTTTTGGCCCGGTCTTGAATTTCACAGTTCG ACGCCGTGGAAGCGAGGCTTTCGCAGCTTGGCCCCAACCTCTAGGTCCAT GCGGGCTTTTACGCTAGGCGGGAGACGCAAGGCTTGCCGGGCATGGAGAG GGGAAGGCAAACCTGCGCGTACTGTTGTCTTGTGTTCCACCGCAGTCGTG AAATACGTAAGGCGGACCCGCTCGCCTTAGTGGTGGTGTGCGTTTCTCCA GCCGTGTCAATGTTGGTATACTGTGGTACTGTTATTTTCACTCCACCTGT CGCGGGCACAACGCAGGGCGATGCCTGTTGGTCCGGTTCGTGCGGCCGAA GGTTGTGGTCAAATTCCTGCTTGAACAACGCTTTGTATTCGCGCGACTTT GGTTTTGCGTGAGCGATGTAGACGTTGTCCGTAAAGGGCCGCCTGTTGCC CGACGTGTCTCGTCTTGTCACTCACCCCTGTTGGTCATTTTAGCAGCACT CTAAACCATAACCATGCGGATCGCACTGTTTGGTTGTACCGACGAGGCGC GGCGCTGTTTGTCGGTGATGTTTGTTTTTATATTGCGTGTTGGGCGCTAA CAACGTGTGTAGCTGTAGTTACGTATTATATATAGAACCATGACAGCGTT TTGGGTTATTGGGCAGTTTGAGTCAACGGCGAAGATTCTTGGGCCGCGTC CTGCCAAAAGTAGAGTATTTGGTCATCACACATGGCAACCACAAGCTTCC GGCTATGATTGGTGCAGCGTAACAAGGCGCAGTTGCCTTTCGTTGGCAAG TCTTGTCCTTAATTAAGTCGATCGACACACAAAGCAGAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1448:4207..15145-

>mRNA_Ecto-sp13_S_contig1448.3446.1 ID=mRNA_Ecto-sp13_S_contig1448.3446.1|Name=mRNA_Ecto-sp13_S_contig1448.3446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2667bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1448:4207..15145- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATGGGGACGACGAAACGAGTGCGTCAACACCAGACCGCCTTAACGG
GGCGGGTGCGAGAATATCGTTGCCGAGACGAGGCGGACCGGGCCACAACC
GCAACTGGGCCAGAATGTCGCTCGGCGGACTTGCCCGTGGAAGGCGACGT
GACAAGGAGCCCAAAGGTCTGACGCCCCGCTCGCCGACGCGTCGGATGAC
GCTCGGAGGGGCCATGAGGGAGCAGGGCGTGGGCGCCGGTGGGCACGCGT
ATAAGGGGCGGCATGGCATCCGTTATGAGCAGCCGCACCCGGATGCTTGG
ATGGAGGAGCTCGGTGAAGACCAGGCCGCGACTTCCCTTCCCATCTCAAC
GTCGCCGGGGCGGCTGGCTAGTCCTATCGCCGAGGATAGTGTCGCAGCTG
TTGAAAGCGAAAAAAAAGCCCTGGAGGGACGGGACGACACAGATGCGAAG
GACGCTGGCGGCAACGATGTTGGCACGGATGGACATAAGAACAGCTCTTC
GGTCCGGCCAACCGGGCAGGGGCAGGTTCCCGCGAGTGGAGCGGTACCAC
TAAGCGATGTTTGTGTCGACACCGGTACCGGCTTCGGGGCTGGTCCGCCC
CCGATGGGCAATGTCAGCCCGTCCTCAGAGTATAGACGTGGGAGCATGTC
CCCCGGTGTGCCTACGGAAGGAAGACTACGGACACAATCGTGGACTGCTG
CCGCCGCCGCTCCCTCACCGCCGGTTCTCCGAGGCCCTTTCTCGAGGGCA
CGCTCACGGTCCCGCTCGCCGCGTCACAGGGTGAGCATGACTCTCGGCCC
GACTGGGGGCTTGCATTTGGCTCGAAAGCCTGAACACAACAGGTTCAGCA
GCGGGGGAACAAGCATGGGAGCTGACCGAAACATAGGGCTGTCTGAGAAC
CCGAGCATAGCAAGCACGGTGGAGGAGGGCGTGAATTTGAAAGAGGGGGA
AGATGACCGTCCGGTTGAGAGAGGGGATGAGGATCAGGAGGACAAGGCCG
TCGGTCCGTTTACAGAGACCTCCTTGGAGATGGCGCGGTTACGCCTGCCG
CACATGGAGCTGGGCTTCGAAGAAGACGGATTCTTCGGGATTGACGTGCG
ATCCCTGATTATCGGGAGGGAAATCGCACGAGGAGCTTACGGCGTGGTTC
ATGAAGGAAAGCTACATCCGTCGCCGAGAGATGCGAGTGTTGAGGATGGA
GAAGCAGGTACCACAGCGGCTGCCACGGAAGCAGAAGGTGGCGCGGCTGC
CAACATAGAGGGAGATGTGGAGAGGGACACACTTGCAACGGAGGTGACGG
AGGGCGAGGAGGAAATTTTCCATGACGCTGCTCAAGAGAGCGTGGAACAC
GCTAAAGGAGAAGGGGATACTGCACAGGAAGAGGAGGAGGAGGCGAGGAG
CGTGGCAGTGAAGATTCAACAAGTACCCGAGGACGAGGAAGAGCAAGCCA
ACCTGCTGGGGGAGCTTGCGATGCTAAGAAATCACAAGCACTCGCACCTC
GTTGAGTTCATCGGAACGGCTATGGCCGTGGAGAGAGGTTCCGACACGGT
GATGGTGGCGATGGAATTGTGCACCAACGGGGCGTTGCGAGAGGCGTTGA
AACTCAACATCGACTGGCCACTCAAGGTTCGAATCGCGTCAGACATGACG
GATGGGCTGCAATTCCTGCACCAACACGGTATCATCCACCGAGATATCAA
AACCCCCAACGTTTTGATCGACGGCTGCTGGAGAGCGAAGCTCTGCGACT
ACAACTTCGCCATCGACGAGAACAGCTCCATCAAGCAGGACTTTTGCGCG
GGAACGGCGGAGTTCATGTCTCCCGAGGTGTTGCTCTCGGAGGAGTACGG
GCTACCGAGTGACGTCTTCAGCCTGGGCATGATATTTGTAGAGATGCTTA
CTGGTCAGGAACCAAGCCCTTCCTTCCCGGAGAGGCCGCCACAGACGTTC
TTCGTCGTTAGCGAGGAGGAGATAGAGGGGCAGCTGCTGCCAGGGTATCC
TTCGTCCTTTTCGCTTTTGCAGTCGCAATGCCTCTTCGCCGAACCAGTTG
AGAGACCCACGGCGGAAGACGCTTTTAACTGGCTGCAGGATCTGGTTAGC
GAGACAGGCGAAGATAACATCGTCTTGCCGCAGAGTGGCCCTCCGCTTCC
CGTGCTGACAGAGGGAGCGGCCATCGCTAGGGAAGGGAACGTCATCAACG
CTAGTCCGAAGGGCAATGAACAACACTGGTTGGACACGGAGATGATGGAG
CAGCAAATAGACGCCATGGTGGAAAATGCGGTGGAGCGTGCCTTGGCAGA
CCGAAGAGGCCAGGATGTTGGTCTGGTCGGCGGGGTGACGGGAGAGAACG
AAAGTGCGGCAAAATTCGAGCAGATGAAGGAAGAGATGGATGCACTCCGA
GCTGCTTGCGACGAGCGAGATAGTCGCATCTCAGAATTAGAAGTGCAGGC
CCTTCGAAACACGTCGACGCTCAAGATGCTGTCGTCAGCTTTGGAGGTGG
CGTACAAGCAGCTGATGGCTGTATCACAGCCCGACTGGAGCTCCGGGGCA
AACGGACCCCAGGCGGATGAAGCAGCATCTTCCGAACGTGGAAACTTCTC
CCGACAGGAGCACGATGATTTCGACGCCGTGGAAGCGAGGCTTTCGCAGC
TTGGCCCCAACCTCTAG
back to top