mRNA_Ecto-sp13_S_contig1447.3441.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: D7G919_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G919_ECTSI) HSP 1 Score: 1502 bits (3888), Expect = 0.000e+0 Identity = 801/840 (95.36%), Postives = 809/840 (96.31%), Query Frame = 3
Query: 564 MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADAIPPEPPVSVARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSEAASASSSLMQEDLFEDPFVRKELPSETTKAHGGLRAAMIGAENTVSHPRGSLFDDEYVGLEDIGPEEEEDEGQSGRQGSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASVAQGRSRSKSKPSRGLDLGEVRRRTSLLSGGSRAPPPSVXXXXXXXXXXXXXXXXXSSYFDGGWGPQQPAAPSGEVPPHPLHAAPADPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWTSGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPRKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRCETYDDVMAVLPKLPRPVLITFLRGGTGHSAEGRSMAARRASTTSEDVQGGGNPLEWLAKLNPFDKGRRDEEDELRGKPPGKSQVDSKVLASREHGSTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPTAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSPSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVHELEDHISRIPPDAHLLSDVKLYGLVARCQKAWPGLKSAAAEASGASSPTLLPRIVQCDEGMECAFENLRALLTSRGYIG 3083
MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTAD IPPEPPVS+ARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASS AASASSSLMQEDLFEDPFVRKELP ET KAHGGLR+AMI AENTVSHPRGSLFDD+ VGL D GPEEEEDE QSGR GSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRAS+AQGRSRSKSKPSRGLDL EVRRRTSLLSGGSRAP XXXXXXXXXXXXXXXXX SYFDGGWGPQQPAAPSGEVPPHPLHAAP+DPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGW SGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGP+KGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQR ETYDDVMAVLPKLPRPVLITF RGGTG+SAEGRSMAARRAST SEDVQGGGNPLEWLAKLNPFDKGRRDEEDELR GKSQVDSKVLASREHG TGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHE+SWMVARRYREFDALDLDLRD YPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTP AVGSSSPRLSYRNLGANGSSSNVFPAHSPESRS SLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVHELEDHISRIPPDAHLLSD KLYGLVARCQKAWPGLKSAAA ASGASSPTLLPRIVQCDEGMECAF NLRALLTSRGYIG
Sbjct: 1 MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELPPETAKAHGGLRSAMISAENTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGRHGSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPKKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDELRAS--GKSQVDSKVLASREHGPTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVHELEDHISRIPPDAHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFGNLRALLTSRGYIG 838
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A835YRV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV1_9STRA) HSP 1 Score: 304 bits (779), Expect = 1.020e-84 Identity = 249/676 (36.83%), Postives = 329/676 (48.67%), Query Frame = 3
Query: 1134 PTHDTRASVAQGRSRSKSKPSRGLDLGEVRRRTSLLSGGSRAPPPSVXXXXXXXXXXXXXXXXXSSYFDGGWGPQQPAAPSGEVPPHPLHAAP---ADPLFSG-----GNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWTSGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPRKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRCETYDDVMAVLPKLPRPVLITFLR-GGTGHSAEGRSMAARRASTTSEDVQGGGNPLEWLAKLNPFDKGRRDEEDELRGKPPGKSQVDSKVLASREHGSTGEVFARGVRGGVFSWSYYGTSDGIES-----NTRDAYTEHVMRCQWGKSVHTMHEISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPTAV--GSSS-------------PRLSYRNLGANGSSSNVFPAHSPESR----SPSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFA-----EDLVHELEDHISR----IPPDAHLLSDVKLYGLVARCQKAWPGLKSAAAEASGA-SSPTLLPRIVQCDEGME 3032
P R + A + K K +DL E RRRT+LL G S G G AAP PP PL P ADPL +G G+YFNEDLLR R R++ G + + W +G A+ AGS ++ A+ GAK+LLQ A +A GS ++VTFG+GR GFT+ + + +G GVVCKV STA S GVS GDTV +N++R +YD+VM+VLP +PRPVL+TF + G A G++ A D QG WL L+PF G+R L G +V+++ L R G V GVFSWS YGTSDG E+ +T D YTE+VMRCQWG + H WMVARRYREFDALD DLR+ +P KD+ P LPPKE FK + +VV RR GLE YMT LI PD+L ++RFL I ER++ ++ + GSS P LS + + A SR +LVGTDY+LNLM++ EA+ L +AR + + A E+ V L + + A L D +L+GL CQ++WP LK+ AA A +LP ++QCDE +E
Sbjct: 189 PARPARVASAAPAAAGKPKSRGSIDLEEARRRTALLMGDGA----------------YSRRSSSGSVGAGMAGAAAEAAPVRREPP-PLATRPQMPADPLGAGSSDAGGSYFNEDLLRQRQARAATYGSTYPYDANEQDASSAWDTG-AILGRAGSMVSAAKSGAKSLLQRANGYGNAXXXXXXXXXX-------------GS----------YDVTFGDGRLGFTMLKSE----QGLGVVCKVQPDSTAASAGVSPGDTVVAINRRRMSSYDEVMSVLPSMPRPVLVTFAKPDGEPQLANGQA-ALTGGGAWEADGQGSKG---WLGNLDPFKSGKRRSSAGLSG-DNASWRVENQDLQFRRPDFHGVVVH--AHNGVFSWSLYGTSDGSEAPGARLSTGDTYTEYVMRCQWGPDL--QHMSPWMVARRYREFDALDKDLREVFPHLKDSFPSLPPKELFKTSQEVVSRRRVGLEQYMTFLIGNCPDVLCCPQMNRFLGIDERIAAIKGQGGLRRGSSGAPAXXXXXXXXXVPSLSASTSSGPLQARLLLCATEASSRITVGCAALVGTDYLLNLMTAGEAYDLMRARAGALRPLTRAGLQAVEEAVRRLRQRVDDWGRGVAVVADPLHDAELHGLAEICQQSWPALKATAARADDTPEGMDMLPSVLQCDEDIE 810
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A6H5JI33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI33_9PHAE) HSP 1 Score: 124 bits (312), Expect = 3.060e-30 Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 2
Query: 3224 GDLTGTISDTGTIQNCA*IVPNRPYSGPENSSVVPA*HYSGLFDFRVQRVRVAGLTEYQTNRIWINREVGDVG 3442
GDLTGTI TGT+QNCA IVP R YSGPEN S+VPA HYSGLFD RVQR+R+AGLT+YQTN +WINREVGDVG
Sbjct: 5 GDLTGTIPGTGTVQNCAWIVPKRHYSGPENLSMVPAWHYSGLFDNRVQRLRIAGLTKYQTNSVWINREVGDVG 77
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A7S1U6D7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6D7_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.160e-29 Identity = 100/291 (34.36%), Postives = 142/291 (48.80%), Query Frame = 3
Query: 2238 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFFK-MAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTL-------QTPTAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSPS------LVGTDYILNLMSSEEAWRLSQARRSSPVD---VAFAEDLVHELEDHISRIPPDAHLLSDVKLYGLVARCQKAWPGLKSAAAEASGASSPTLLPRIVQCDEGMECAFENLRAL 3059
GVFS+ Y TS +T YTE+VM+C +G + SW+VARRY EF A+D LR+TYP P LP KE++ M+ + V+RR GL YM LIR FP +L S ++ FL ++ER S + A SSS R S N P RSPS L L L++SE+ + P+D + AE V +L+ H++ + ++ D L L+ + WP L++ A A+ A P L PR +QCDE + +LR+L
Sbjct: 66 GVFSFQMYSTSTASNPDTGSPYTEYVMQCAYGPGFDNLR--SWLVARRYSEFYAMDTALRETYPALAPRFPNLPAKEYYNSMSAETVQRRRSGLNGYMKMLIREFPTVLKSRTMNEFLQVAERASDVLRTADIFMAEAAERSSSIRRSNSNASQ--------PRERRLRRSPSNDAENDLTDPTEALPLITSEQVDLYVAEQAPGPMDWESLTAAEREVQKLQAHVAHLSAKERIVEDQVLLELLQATLRFWPRLRATGALAADAD-PLLTPRALQCDEELGRVVADLRSL 345
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A7S3K4V4_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4V4_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.450e-25 Identity = 82/190 (43.16%), Postives = 106/190 (55.79%), Query Frame = 3
Query: 2124 EEDELRGKPP-GKSQVDSKV--------LASREHGSTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPK-EFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPTAVGSSSPRLSYR 2663
EED++ PP G +Q D K LA H G+ A GGVFS S YGT++ + T + YTE+++RCQ+GK+ TM WMVARR+REF A+D +LR PD LP LP FF M+P VVE+R GLE Y+ TLI FP L S LD FL I R++ P + S++ S R
Sbjct: 573 EEDDVFAPPPVGATQADPKAEWRVTRNDLALHRH-ELGKAAATYAFGGVFSCSMYGTAEAKDFETGEPYTEYIIRCQFGKTFETMKP--WMVARRFREFVAVDANLRAALPDLAPHLPPLPSSFVFFAMSPQVVEQRQHGLEQYLKTLITEFPATLKSPQLDEFLCIHSRIAASTAPRSSTSNASATSSR 759
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A7S2BPG0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BPG0_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.030e-23 Identity = 89/285 (31.23%), Postives = 135/285 (47.37%), Query Frame = 3
Query: 2235 GGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFF-KMAPDVVERRAKGLELYMTTLI--RRFPDMLASSHLDRFLTISERLSTLQTPTAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSPSLVGTDYILNLMSSEEAWRLSQARRSSP-----VDVAFAEDLVHELEDHISRIPPDAHLLSDVKLYGLVARCQKAWPGLKSAAAEASGASSPTLLPRIVQCDEGMECAFENLRALLT 3065
GG+F + YGT+D ++ T YTE+V+RCQWG+S +M W+VARRYREF ALD L+ +PD + LP LP K F ++ D V R + LE Y+T L+ + + S+ +D FL IS+R+ +Q G S P + +++ + I+ L+S+ +A +A S ++A E V L + + P + K L + CQK WP LK+ SS L+PR +Q DE + L + T
Sbjct: 12 GGIFGCTMYGTADALDMETGQTYTEYVLRCQWGESFPSMKP--WIVARRYREFCALDSSLKYAFPDLAEYLPGLPRKHIFGTLSSDTVNVRQRQLEDYLTRLMTDEKLAVTMKSAQIDEFLMISQRIKLIQE---TGQSVPNMQ--------DDTDIIS-----------IPPGKIIQLLSAADAQEAFEANNYSERPLTSAELALLEADVLTLSNLTENLDPKVPISRGTKK--LASLCQKEWPKLKATGCVDGHNSS--LVPRALQLDEDLTRIASTLSTIAT 268
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A1W0A1M2_9STRA (PX domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1M2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.170e-12 Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 3
Query: 2259 YGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2597
+G+ + ++ ++ YTE+++RC + + +W ARRYREF A+D+ LR+ YP LP LP K++ +A D VE+R + L Y+TTL+ +P++ +D FL +S
Sbjct: 12 FGSYEALDQDSGKFYTEYILRCTQQDGLRSQ---TWKTARRYREFCAIDVLLREKYPHLSATLPPLPSKKYLGSSLASDFVEKRQRELGQYITTLLLLYPELAKDEIVDEFLELS 123
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A067CTP4_SAPPC (PX domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTP4_SAPPC) HSP 1 Score: 73.9 bits (180), Expect = 8.170e-12 Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 3
Query: 2211 EVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2597
EV V+ VF G+ + ++ ++ YTE+++RC + SW ARRYREF A+D+ LR+ YP + P LP K++ ++ D VE+R + L Y++TL+ +P +L +D FL +S
Sbjct: 3 EVMHEAVKVDVF-----GSYEALDQDSGKFYTEYILRCNVQDPSARLR--SWNAARRYREFCAIDILLREKYPHLASSFPSLPSKKYLGSSLSSDFVEKRQRDLGHYISTLLSLYPQLLHDEIMDEFLELS 126
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A1V9Z4F0_9STRA (PX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4F0_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.180e-11 Identity = 38/116 (32.76%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 2259 YGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEI-SWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2597
+G+ + ++ ++ YTE+++RC +V + +W ARRYREF A+D+ LR+ YP + P LP K++ ++ D VE+R + L+ Y+++L+ +P +L +D FL +S
Sbjct: 17 FGSYEALDQDSGKFYTEYILRC----NVQDPGRLRTWNTARRYREFCAIDILLREKYPHLASSFPSLPSKKYLGSSLSSDFVEKRQRDLDQYISSLLNLYPQLLQDELVDEFLELS 128
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Match: A0A3R8CJ93_9STRA (PX domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R8CJ93_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 5.390e-11 Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 3
Query: 2238 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMH---EISWMVARRYREFDALDLDLRDTYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERL 2606
G F G+ + ++ + YTE+++RC W K T ++ W V RRYREF A+D+ LR+ YP R P LP K++ ++ D V++R + L Y+ +++ P ++ +D FL I +
Sbjct: 18 GDFRVEVLGSQESLDLDCGKFYTEYILRCSWIKCNGTPEVKLQLIWDVVRRYREFCAIDILLREKYPSRAPMFPYLPSKKYIGSSLSADFVDKRQRDLGYYIMSILHSCPLLVQDEIIDSFLDIKRHI 145 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1447.3441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1447.3441.1 >prot_Ecto-sp13_S_contig1447.3441.1 ID=prot_Ecto-sp13_S_contig1447.3441.1|Name=mRNA_Ecto-sp13_S_contig1447.3441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=985bp MHVPRQRQLAHVQMCREVKPPTLLRTILQNANPLGLRTPGEKTAALLLQQback to top mRNA from alignment at Ecto-sp13_S_contig1447:5805..15079- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1447.3441.1 ID=mRNA_Ecto-sp13_S_contig1447.3441.1|Name=mRNA_Ecto-sp13_S_contig1447.3441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9275bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1447:5805..15079- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1447:5805..15079- >mRNA_Ecto-sp13_S_contig1447.3441.1 ID=mRNA_Ecto-sp13_S_contig1447.3441.1|Name=mRNA_Ecto-sp13_S_contig1447.3441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2955bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1447:5805..15079- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |