mRNA_Ecto-sp13_S_contig14461.3434.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14461.3434.1
Unique NamemRNA_Ecto-sp13_S_contig14461.3434.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: D7G8S8_ECTSI (Acetyl-CoA acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S8_ECTSI)

HSP 1 Score: 474 bits (1220), Expect = 6.730e-166
Identity = 241/254 (94.88%), Postives = 245/254 (96.46%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERLQ 762
            GIIHDGLWDVYNDHHMGICAEKCS AYGISREAQDEHATESYQRAALAWEKG FDEETTPVEI SRRG PTTITKDEEYTNIDLGKLKGLRPAF+REEGTVTAANASSLNDGAAALVLMS A RAEELGVKPLARI GY DAARAPVEFT+APSDAVPVALKNA ISLGDVDFHEINEAFSVVALANMKI+GLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAI+IERLQ
Sbjct:  173 GIIHDGLWDVYNDHHMGICAEKCSSAYGISREAQDEHATESYQRAALAWEKGRFDEETTPVEISSRRGSPTTITKDEEYTNIDLGKLKGLRPAFEREEGTVTAANASSLNDGAAALVLMSTA-RAEELGVKPLARILGYGDAARAPVEFTIAPSDAVPVALKNAAISLGDVDFHEINEAFSVVALANMKIMGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIIIERLQ 425          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: A0A7S4VFA4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VFA4_9STRA)

HSP 1 Score: 341 bits (874), Expect = 9.690e-114
Identity = 175/254 (68.90%), Postives = 206/254 (81.10%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERLQ 762
            G+IHDGLWDVYND HMG+CAEKC+  Y ISRE QD +A ESY+R+  A E G F+ E   V++P RRG PT I+ DEE  ++ L K+  LRPAFQRE GTVTAANASSLNDGAAA+VLMS    A +  +KPLARIRGY DA + PV+FT APS AVPVAL+NAG+ L D+++HEINEAFSVVA++NMK+L LDP++VNV GGAVA+GHPIG SGARII +LY+VLKQ D TVGCASICNGGGGASAIVIERL 
Sbjct:  147 GVIHDGLWDVYNDQHMGMCAEKCASDYSISREEQDNYAIESYRRSQEAIEAGAFESEIESVQVPQRRGDPTIISTDEEPFSVKLDKVSTLRPAFQRENGTVTAANASSLNDGAAAMVLMSEQD-ALDRNLKPLARIRGYGDAEQDPVDFTTAPSLAVPVALRNAGMDLSDIEYHEINEAFSVVAISNMKLLNLDPSKVNVFGGAVAIGHPIGMSGARIIGTLYNVLKQCDATVGCASICNGGGGASAIVIERLN 399          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: A0A7S2HN88_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HN88_9STRA)

HSP 1 Score: 338 bits (866), Expect = 1.530e-112
Identity = 172/254 (67.72%), Postives = 207/254 (81.50%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERLQ 762
            G+IHDGLWDVYND HMG+CAEKC+  Y ISRE QD +A ESY+RA  A EK  F++E   VE+P RRG    ++ DEE  ++ L K+  L+PAFQRE GTVTAANASSLNDGAAA+VLMS  + A ++G+KPLARIRG+ DA + PV+FT  PS AVPVALKNAG+ L DVD+HE+NEAFSVVA+ANMK+L LDP++VNV GGAV++GHPIG SGARII +LY+VLKQ D T+GCASICNGGGGASAIVIER+ 
Sbjct:  146 GVIHDGLWDVYNDQHMGMCAEKCASDYAISREDQDAYAIESYRRAQEAIEKKVFEDEIEGVEVPQRRGDSKIVSTDEEPFSVKLEKVSALKPAFQRENGTVTAANASSLNDGAAAMVLMSEQA-ALDMGLKPLARIRGFGDAEQDPVDFTTTPSLAVPVALKNAGMKLSDVDYHEVNEAFSVVAIANMKLLNLDPSKVNVFGGAVSIGHPIGMSGARIIGTLYNVLKQCDATIGCASICNGGGGASAIVIERMN 398          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: A0A7S1CPK7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPK7_9STRA)

HSP 1 Score: 329 bits (843), Expect = 3.280e-109
Identity = 168/253 (66.40%), Postives = 205/253 (81.03%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERL 759
            GI+HDGLWDVYND HMG+CAEKC+  YGISREAQD +A +SY+RAA AWE G F +E   V +P RRG    + +DEE+  I+  K+  L PAF++  G+VTAANASSLNDGAAA+VLMSAA RA ELG  PLARI G+ DAA+AP +FT AP+ A+P+AL +AG++ GDVD+HEINEAF+VVALANM+++GLD +RVNVNGGAVALGHPIG SGARI+ +L  VLKQ D  VG ASICNGGGGAS+I++ERL
Sbjct:  137 GIVHDGLWDVYNDQHMGMCAEKCAADYGISREAQDAYAIDSYKRAAAAWEAGLFADEVCAVSVPQRRGDALVVDRDEEFARINYDKVGKLAPAFKKG-GSVTAANASSLNDGAAAMVLMSAA-RAAELGATPLARIVGFGDAAQAPEDFTTAPALALPLALADAGMAAGDVDYHEINEAFAVVALANMQLMGLDASRVNVNGGAVALGHPIGCSGARIVGTLLSVLKQKDARVGAASICNGGGGASSIIVERL 387          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: A0A8K1FBF8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBF8_PYTOL)

HSP 1 Score: 328 bits (841), Expect = 1.610e-108
Identity = 166/253 (65.61%), Postives = 205/253 (81.03%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERL 759
            G++HDGLWD YN+ HMG+C E C+ ++G SRE QD +A ESY RA  A ++G F++E TPVEI  RRG P   TKDEE       K+  LRPAF+++ GTVTAANAS LNDGAAALV+MS A +A+ELG+KPLA+IRG+ADAA+ PVEFT+APS AVP+AL +AG+ L DVD+HEINEAFSVV+LANM+++ LD  RVNVNGGAVA+GHPIG SGARI+ SL H+L++ D T+GCASICNGGGGA A+VIERL
Sbjct:  164 GVVHDGLWDPYNNQHMGMCGEACADSFGFSREDQDAYAIESYNRALEANKRGFFEKEITPVEIKQRRGDPIVYTKDEEPFQTKPEKIPSLRPAFKKD-GTVTAANASPLNDGAAALVIMSGA-KAQELGLKPLAKIRGFADAAQDPVEFTIAPSKAVPLALHHAGLQLQDVDYHEINEAFSVVSLANMRLMNLDHNRVNVNGGAVAIGHPIGMSGARIVGSLIHILQERDATIGCASICNGGGGAGAMVIERL 414          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: A0A485LQ82_9STRA (Aste57867_24360 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LQ82_9STRA)

HSP 1 Score: 327 bits (838), Expect = 3.780e-108
Identity = 163/253 (64.43%), Postives = 205/253 (81.03%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERL 759
            G+IHDGLWD YN+ HMG C EKC+  +G +RE QD++A ESY RAA A + G F  E  PV IPSR+G PT +++D+E  N+ L K+  LRPAF+++ GTVTAANAS LNDGAAALV+M A  +A+ LG+KPLARIRG+ DAA  PV+FT AP+ AVP+A K+A +SL D+D+HEINEAFSVV+LANM+++ LD +RVNVNGGAVALGHPIG SGARI+ +L H+L+QND T+GCASICNGGGGA A++IERL
Sbjct:  159 GVIHDGLWDPYNNQHMGNCGEKCADEFGFTREDQDKYAIESYTRAANAAKAGRFAAEIVPVSIPSRKGDPTIVSQDDEVYNVKLDKIPSLRPAFKKD-GTVTAANASPLNDGAAALVVM-AYEKAQALGLKPLARIRGFGDAAHKPVDFTTAPAKAVPIAAKHAKLSLTDIDYHEINEAFSVVSLANMQLMNLDHSRVNVNGGAVALGHPIGMSGARIVGTLIHILEQNDATIGCASICNGGGGAGAMIIERL 409          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: A0A836CMJ8_9STRA (Acetyl-CoA acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.660e-107
Identity = 172/255 (67.45%), Postives = 208/255 (81.57%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRG-PPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERLQ 762
            G++ D L DVYN+ HMG+CAE C+  +G SR+ QD++A ESY+RAA AW+ G F +E   +E+P  RG PP TI++D E + ID  K++  RPAF +  G+VTAANAS+LNDGAAALVL S+A RA ELG+ PLAR+ GYADAAR PVEFTVAPSDAVP AL  AGI+ GDVDFHE+NEAF+VVALANM++  LD A+VNVNGGAVALGHP+G+SGARII +LY VLKQ DGT+GCASICNGGGGASAIVIERL+
Sbjct:  183 GLLTDALTDVYNEQHMGMCAEVCADTHGFSRDEQDDYALESYRRAAAAWDSGKFKDEVFALEVPQSRGKPPVTISRDHE-SPIDPKKVRAARPAF-KSSGSVTAANASTLNDGAAALVL-SSAKRARELGLSPLARVLGYADAARDPVEFTVAPSDAVPRALSVAGIAAGDVDFHEVNEAFAVVALANMRLQRLDHAKVNVNGGAVALGHPLGASGARIIGTLYTVLKQEDGTIGCASICNGGGGASAIVIERLK 434          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: K3WL71_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL71_GLOUD)

HSP 1 Score: 324 bits (830), Expect = 6.970e-107
Identity = 161/254 (63.39%), Postives = 200/254 (78.74%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERLQ 762
            G+IHDGLWD YN+ HMG+C EKC+  +G SRE QD +  ESY RA  A E+G F+ E TPV +  RRG P   TKDEE  N    K+  LRPAF+++ GTVTAANA+ LNDGAAALV+MS   +A+ELG+ PLARIRG+ADAA+ PVEFT+APS AVP+AL +AG+ L DVD+HEINEAFSVVALANM+++ +   R+NVNGGAVA+GHPIG SGARI+ +L H+L++ D T+GCA+ICNGGGGA A+VIERL 
Sbjct:  162 GVIHDGLWDPYNNQHMGLCGEKCAEDFGFSREDQDAYTIESYNRAIQANERGFFESEITPVSVKQRRGDPLVFTKDEEPFNTKPEKIPSLRPAFKKD-GTVTAANATPLNDGAAALVIMSG-EKAQELGLTPLARIRGFADAAQDPVEFTIAPSKAVPLALNHAGLQLSDVDYHEINEAFSVVALANMRLMNIQHDRINVNGGAVAIGHPIGMSGARIVGTLIHILRERDATIGCAAICNGGGGAGAMVIERLN 413          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: A0A448ZBV3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV3_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.590e-106
Identity = 162/254 (63.78%), Postives = 199/254 (78.35%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERLQ 762
            G+++DGLWD+YND HMG+C EKC+  Y  SRE QDE+A ESY+RA  A  +G F EE  PVEIP RRG    + +DEE  ++ L ++  L+PAF R  GT+TAANASSLNDGA A+VLM+     ++ G+ P+A+IRG+ DAA+APVEFT  PS AVP AL+NAG+   DVD+HEINEAFSVVALANM++L LD ++VNV GGAV+LGHPIG SGARII +LY+VLK  DG +GCASICNGGGGASAIVIERLQ
Sbjct:   90 GVVYDGLWDIYNDQHMGMCGEKCAKDYAFSREDQDEYAIESYRRAQAALVEGVF-EEVIPVEIPQRRGNQLVVNEDEEPGSMKLDRIASLKPAFDRTNGTITAANASSLNDGACAMVLMTEQDALDK-GINPIAKIRGFGDAAQAPVEFTTTPSLAVPXALQNAGVEASDVDYHEINEAFSVVALANMQLLNLDQSKVNVFGGAVSLGHPIGMSGARIIGTLYNVLKHKDGNIGCASICNGGGGASAIVIERLQ 341          
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Match: B7GDK2_PHATC (Acetyl-coa c-acetyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDK2_PHATC)

HSP 1 Score: 322 bits (826), Expect = 1.640e-106
Identity = 169/253 (66.80%), Postives = 195/253 (77.08%), Query Frame = 1
Query:    1 GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWEKGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGTVTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFTVAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNVNGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVIERL 759
            G IHDGLWDVYND HMG+C EKCS  Y  SRE QD +A ESY+RA  A   G FDE   PV +P RRG P  + +DEE   ++L K+  L+PAF R+ GTVTAANASSLNDGAAALVLM+    AE  G++PLARIRGY DA + P++FT  PS AVPVAL++AGI   DV++HEINEAF+VVALANM ILGLD A++NV GGAVALGHPIG SGARII +LY  LK  D T+GCASICNGGGGASAIVIERL
Sbjct:  145 GCIHDGLWDVYNDQHMGMCGEKCSQDYSFSREDQDAYAMESYRRAQEALISGVFDE-VVPVSVPQRRGDPLVVDQDEEPLAVNLDKISTLKPAFDRKNGTVTAANASSLNDGAAALVLMTEVD-AEAQGIQPLARIRGYGDAEQDPIDFTTTPSLAVPVALEHAGIQASDVEYHEINEAFAVVALANMHILGLDHAKLNVFGGAVALGHPIGMSGARIIGTLYSALKSKDATIGCASICNGGGGASAIVIERL 395          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14461.3434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8S8_ECTSI6.730e-16694.88Acetyl-CoA acetyltransferase n=1 Tax=Ectocarpus si... [more]
A0A7S4VFA4_9STRA9.690e-11468.90Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2HN88_9STRA1.530e-11267.72Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A7S1CPK7_9STRA3.280e-10966.40Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A8K1FBF8_PYTOL1.610e-10865.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LQ82_9STRA3.780e-10864.43Aste57867_24360 protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A836CMJ8_9STRA1.660e-10767.45Acetyl-CoA acetyltransferase n=1 Tax=Tribonema min... [more]
K3WL71_GLOUD6.970e-10763.39Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A448ZBV3_9STRA1.590e-10663.78Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B7GDK2_PHATC1.640e-10666.80Acetyl-coa c-acetyltransferase n=2 Tax=Phaeodactyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14461contigEcto-sp13_S_contig14461:162..4232 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score478.8
Seed ortholog evalue1.6e-132
Seed eggNOG ortholog2880.D7G8S8
Model size765
KEGG rclassRC00004,RC00326
KEGG koko:K00626,ko:K03066
KEGG ReactionR00238,R01177
KEGG Pathwayko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,ko03050,ko05169,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020,map03050,map05169
KEGG ModuleM00088,M00095,M00341,M00373,M00374,M00375
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.acetyl-CoA C-acetyltransferase activity
EggNOG OGsCOG0183@1,KOG1390@2759
EC2.3.1.9
Cds size765
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03051,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14461.3434.1prot_Ecto-sp13_S_contig14461.3434.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14461 162..4232 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462771.9086454-CDS-Ecto-sp13_S_contig14461:161..2911681462771.9086454-CDS-Ecto-sp13_S_contig14461:161..291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14461 162..291 -
1681462771.9213638-CDS-Ecto-sp13_S_contig14461:990..10581681462771.9213638-CDS-Ecto-sp13_S_contig14461:990..1058Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14461 991..1058 -
1681462771.930916-CDS-Ecto-sp13_S_contig14461:1941..20761681462771.930916-CDS-Ecto-sp13_S_contig14461:1941..2076Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14461 1942..2076 -
1681462771.940339-CDS-Ecto-sp13_S_contig14461:2632..26961681462771.940339-CDS-Ecto-sp13_S_contig14461:2632..2696Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14461 2633..2696 -
1681462771.9493308-CDS-Ecto-sp13_S_contig14461:3196..33211681462771.9493308-CDS-Ecto-sp13_S_contig14461:3196..3321Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14461 3197..3321 -
1681462771.9583158-CDS-Ecto-sp13_S_contig14461:3524..36141681462771.9583158-CDS-Ecto-sp13_S_contig14461:3524..3614Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14461 3525..3614 -
1681462771.9747682-CDS-Ecto-sp13_S_contig14461:4079..42321681462771.9747682-CDS-Ecto-sp13_S_contig14461:4079..4232Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14461 4080..4232 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14461.3434.1

>prot_Ecto-sp13_S_contig14461.3434.1 ID=prot_Ecto-sp13_S_contig14461.3434.1|Name=mRNA_Ecto-sp13_S_contig14461.3434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
GIIHDGLWDVYNDHHMGICAEKCSFAYGISREAQDEHATESYQRAALAWE
KGHFDEETTPVEIPSRRGPPTTITKDEEYTNIDLGKLKGLRPAFQREEGT
VTAANASSLNDGAAALVLMSAASRAEELGVKPLARIRGYADAARAPVEFT
VAPSDAVPVALKNAGISLGDVDFHEINEAFSVVALANMKILGLDPARVNV
NGGAVALGHPIGSSGARIICSLYHVLKQNDGTVGCASICNGGGGASAIVI
ERLQ*
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mRNA from alignment at Ecto-sp13_S_contig14461:162..4232-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14461.3434.1 ID=mRNA_Ecto-sp13_S_contig14461.3434.1|Name=mRNA_Ecto-sp13_S_contig14461.3434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4071bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14461:162..4232- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTATCATCCATGACGGGCTGTGGGACGTGTACAACGACCACCACATGGG CATCTGCGCCGAGAAGTGCTCGTTTGCCTACGGCATCAGCAGAGAGGCCC AGGATGAGCACGCTACTGAGAGCTACCAGCGGGCGGCCTTGGCGTGGGAG AAGGTTTGAAAAATCGTTTGGGGTGTGTTGGGTGCAGCGGACTACAACCG TAGTCTCCCGAATAGGGTTTTAGTGTCGTGTGGCGTGGGCAAGCGCATCC AGCGGCAGACAGAGAAACAAGCCTAAGACGATCGCCCGGTCGCCTAGTGT TCTTCCAATCTTGTGGGTTGTTGTATTGGGATGGGTTGGTGACGTTGTTT TATTTACGAATGGTTGTCTGCCGTGTTGTATCGCCAACTTCCAGGTGATA ACTTGCCCACCCACGCCTCTCTCTCCCACCCTCCACTCTTCCCCTCTCCT GTGTTTCTGTCTATCTGATTGTCTTTTTGTCTCTGTCTCTGTCTCTCTCC ATCCCTCTCGCTCTCATGTCCGGCTTGTATTTCACCGTGTGCTGTGTATG TCGCTTCTCTCACACATCAACACCATCACCAACCAGTATATCACGAAAAA CAACCACAACAACAACAGGGACACTTTGACGAGGAGACGACGCCTGTGGA AATCCCTTCGAGGAGAGGCCCGCCGACGACTATCACCAAGGACGAGGAGT ACACAAATGTGAGTACCTGAGGACAGTACCCTATCGATTAATTGTACAAG TCTCCTACCAACACGTCGGGGGACTGTTGCACACGCGGTACAACCTCTCC TTGTCTTTCCGTCAATCTTCATCTTCTCGTGTGTTGAGGAGCAGTGGCCG ACTCTTTTTCCGTCCACGTTTGTTTCGATGACGTGTATGCACGTATATCA ATCGAAAACAGATCGACCTCGGCAAACTGAAAGGCTTGCGGCCTGCGTTT CAGCGAGAAGAGGGCACAGTGACTGCCGCCAATGCTAGCAGCCTCAACGA CGGGGCGGCCGCGCTTGTGCTCATGAGCGCCGCAAGGTTCTATACCCTTG GATGTGTTGTGGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGTTATT GCTGTTGTCGTTGCTGTTGCTGCTGCTGCTGCTGCTGTCAGAATCTGAAT TTTCGACCACCTCTCAAAGTGAATCTGCGGCACGACACGAAGGGTGGGGG CATTGTACCTCACATCTACGTGATTATTGACGTTAGAATTCGCAGGAACA CGCGACAGGTATGATTGTGCTAGCCTTTCGAAACCCGTCGCTGGCTGCGT CGCTCGATACCCCCCCACCCCAACATTAATCGGAATTCATACAGGAAACG ATGACACTACGTTGAACAAAACGCGATGGAAAACATGTGACGGTCCTCAA ACGTTCATTCACGAACTACAAATTGCTTCTCAATCGTAGCCGAGATGCGT GGTAGTTGGTGTAGGCTGTTGAGGCGAAGATCAAGCAGGTGCCCTCCCAA AAACAACGCAGCGGTCGCTCGGATTTCGATGCTGAGCAGGGCGGAGGAGC TCGGGGTGAAACCGCTTGCGAGGATCCGGGGGTACGCGGACGCTGCTCGC GTGAGTGTTATAATTTCTGCTCCCATTATTCCGCCACCCCTCTCGTGGGT GGCGCGAAATTGAACTAAGACAGACGAGATACATGTTCGACAAACATTTC CTGGACCCATAGGTTACCAAGGCTCGTGGAGGGTCAGCGGAGGTCACCCG TGTTTGTTGTTATTGTTGATGCTGTTGCTGTTGCGGAACGGCATCATACC ATTAGAATAGTAGCTGTGATCGCCTTCCCAGCGTTCTTGTGAGAGGAGCC CAGCAGTCAATCTACACCGACCGATGGTGAAGCGACTGCTTGTCCATCGC ATGGAGAGAGTGGGGCAGACCTCTCGACGGCTCCACGTTGCCTTGGAGCA CATCGTTCTCACAGGTGTAGAAGAGGAGCGTGAGAATAGACCGGTACGCA ACAGACAGCAGGGTGGGCGTGTACTCAAACCAATGCGTTCCTTCCCCGCA AGAGAAAACAAAAGATGGACAATAACAAAAAACGTGCCCAAGACCTTTCT CGGGCCGTTTGACGATGGCTTCTCCCCCTCCCCTGCTGAACACCACCGAC TCGCAGGCTCCGGTAGAGTTCACCGTAGCACCCTCGGATGCGGTACCGGT GGCACTGAAAAACGCCGGGATATCTCTTGGAGACGTTGACTTCCACGAGA TCAACGAGGCATTTAGTGTCGTTGCCTTGGCGAACATGAAGGTGAGGCGT TTCGGGCAAACCGTTTACCTTGTGTTGGAAAAAATGCAGGGGTGTGTGTG TGTGATTGGAGAATTGGGTCTGGCTGGAACGACTCATGGAACCGACCAAC CCCGTGCGACCACTTGCGATTCCTAGTATGTCGCGTAGACCACTGGGTCG CTTGCTGCCCCTGCCGTCTGGTAGTTAATGGAGCTGTAACGCTGTTTTTT GCTGCGATTTGGTGGGGTGTGACGCTCGGGTTGGTAAGGTTTAGAGGGAA CGGGGTCCTTTTTTGTGCAACAGCGTTCTTGCTGCCTTGTCGCGGTGTTT GCTGTTCGCTGTGCGATCGCCGGGAGATTGTGACTTGTTGTTGGCGAAAG AAGAGGTCGCCAAGAGTGGAGGAGGCTGCTGGTGGTGGGACAGGAGAGAG GCAAAGACCGGAAAGCTCGTTTCCGCCGCCGATCCGCGGAACCAACACTG GATATTGCCCATTAGGCTTTTTGGCCACCTTGGGCATCATCACAAGACGG GCTACTGCACCTTGCAGTGTTTAGTCGGCTCTAGGACTAGTGCGACTGGG GTTGTTAAGTCTTACAATATCTTGCCAGCGTATGATCAGTACCACCTTCC GATAACACTCTTTTGGCATCAAAGGCGGTGGGTTAGGGGAGAGAAGGCTT ACTACCCCCCCCTCCAACGGCACGATGAAATTCTGAATATAGCGGTCTTG CGCCGTCACTACCCCGACCAGAGCATTCTATCACTCATCCACCTCAGTAA ATGCACCAGTCATTCGATCTTGATGCCCTTGCTAAAAGAGGCAGCAGCAA TGGTAAGATATCGCCCCAATGTGCATACAACCTTTCAAAACGAGTCCCGT TCCTTTCCGTTCGGCGTCGTGCAGATTCTGGGTCTCGATCCTGCGCGGGT AAACGTAAACGGAGGAGCGGTCGCTCTCGGACACCCAATCGGGTAAGCCT AGAGTTGATTTCTGACGCCATCTTTAGTGGTGGTAGGGGTGCCGACCGCC TTGTTTTCTGAGTTTGTTTTTTTCCACGGTACCTGGTTTCCCCGGGTCCG CGCCGTAATGAACATGTGTGGGCATGACTCACAATTCCGCTCGGCACGCG TTGTGATTGCGGACTTTTCTGGTGATGAACTATCACTGTGAGCAATCATC ATCAGTCACCACATTATCGTCAACAACAACGGTTTTACCTAGGTACCAAC GGGATGTCGAGATTGATTTTGAGGAAAGCAAACCACCGACCTGGTGGCCA TTTCCATACGAAGTGTCGACATATAGATGATGGGAATGTATCGCGATATA TACATAGAGCGACATGATTATGGACATGTGGAGTCGTGAGATAGACATGG AGTGATCTTCGATCCATCCAGGCGATCGAGGTACACTCAGAAGTCATGAC ACGACACATGACCTATCGCCCCTCTCCCCCTCCCCCTTCGGTAGTTTTCC ATGTTTCGCTTGACGTTCCTGCTGCAGCTCCTGTAGTTCCTCACGACCTC TCTGTCCCGTTACCTCCTTCCCCCCTCCCCATGTCGTTCGTTACGTCGCC GTCTCCCGGTCATTGTATGTCTGTCGCTTCCCCCTCCTCAACAAAACATG CCCAACACACATCTTCCTGCTGCTACTTGGCACCGCGGTAGGTCGTCTGG TGCTCGCATCATCTGCTCCCTGTACCACGTGCTCAAGCAAAACGACGGCA CGGTGGGGTGCGCGTCCATCTGCAATGGAGGCGGCGGAGCCTCGGCGATC GTCATCGAACGCTTACAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14461:162..4232-

>mRNA_Ecto-sp13_S_contig14461.3434.1 ID=mRNA_Ecto-sp13_S_contig14461.3434.1|Name=mRNA_Ecto-sp13_S_contig14461.3434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14461:162..4232- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTATCATCCATGACGGGCTGTGGGACGTGTACAACGACCACCACATGGG
CATCTGCGCCGAGAAGTGCTCGTTTGCCTACGGCATCAGCAGAGAGGCCC
AGGATGAGCACGCTACTGAGAGCTACCAGCGGGCGGCCTTGGCGTGGGAG
AAGGGACACTTTGACGAGGAGACGACGCCTGTGGAAATCCCTTCGAGGAG
AGGCCCGCCGACGACTATCACCAAGGACGAGGAGTACACAAATATCGACC
TCGGCAAACTGAAAGGCTTGCGGCCTGCGTTTCAGCGAGAAGAGGGCACA
GTGACTGCCGCCAATGCTAGCAGCCTCAACGACGGGGCGGCCGCGCTTGT
GCTCATGAGCGCCGCAAGCAGGGCGGAGGAGCTCGGGGTGAAACCGCTTG
CGAGGATCCGGGGGTACGCGGACGCTGCTCGCGCTCCGGTAGAGTTCACC
GTAGCACCCTCGGATGCGGTACCGGTGGCACTGAAAAACGCCGGGATATC
TCTTGGAGACGTTGACTTCCACGAGATCAACGAGGCATTTAGTGTCGTTG
CCTTGGCGAACATGAAGATTCTGGGTCTCGATCCTGCGCGGGTAAACGTA
AACGGAGGAGCGGTCGCTCTCGGACACCCAATCGGGTCGTCTGGTGCTCG
CATCATCTGCTCCCTGTACCACGTGCTCAAGCAAAACGACGGCACGGTGG
GGTGCGCGTCCATCTGCAATGGAGGCGGCGGAGCCTCGGCGATCGTCATC
GAACGCTTACAGTGA
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