prot_Ecto-sp13_S_contig14459.3428.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14459.3428.1
Unique Nameprot_Ecto-sp13_S_contig14459.3428.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14459.3428.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.530e-34
Identity = 69/89 (77.53%), Postives = 70/89 (78.65%), Query Frame = 0 
Query:    3 GVAAAGVGAAHVLTGPGRLEDGAWEEASSTGPGMRYYGGARFEPLSRKRRSXXXXXXXXXXGAGASSEGGVSTAGDMGEPSPCWRAYGG 91
            G+   GVGAAHVLTGPGRLEDGAW EASS  PGMRYYGGARFEPLSRKRRS          G G SSEGGVS AGDMGEPSPCWRAYGG
Sbjct:  245 GIXXXGVGAAHVLTGPGRLEDGAWGEASSGCPGMRYYGGARFEPLSRKRRSSGGAVAAASRGDGGSSEGGVSEAGDMGEPSPCWRAYGG 333
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14459.3428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMF2_ECTSI2.530e-3477.53Similar to Isochorismate Synthase n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14459contigEcto-sp13_S_contig14459:3039..4380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14459.3428.1mRNA_Ecto-sp13_S_contig14459.3428.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14459 3039..4380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14459.3428.1 ID=prot_Ecto-sp13_S_contig14459.3428.1|Name=mRNA_Ecto-sp13_S_contig14459.3428.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
AAGVAAAGVGAAHVLTGPGRLEDGAWEEASSTGPGMRYYGGARFEPLSRK
RRSSGGAVAAAASGAGASSEGGVSTAGDMGEPSPCWRAYGG
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