mRNA_Ecto-sp13_S_contig14457.3426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14457.3426.1
Unique NamemRNA_Ecto-sp13_S_contig14457.3426.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: D8LTI0_ECTSI (DUF1736 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI0_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 7.050e-106
Identity = 167/184 (90.76%), Postives = 172/184 (93.48%), Query Frame = 1
Query:  499 RGAPSMRHGAAIVKEEKDSGPGVTRYCAALLFAACATLCKEVGITVFGLMVGGEVVRFFEEREWRQRKRKLWQRRRSGVIASAGKHETRLKQALREYWRCRFMMRVPAAAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFS 1050
            RGAPSM + AAIV +EKDSGPGVTRYCAALLFAA ATLCKEVGITVFGLM GGEVVRFFEEREWRQRKRKLWQRRRSGVI++A       +QALREYWRCRFMMRVPAAAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFS
Sbjct:  117 RGAPSMHNRAAIVMKEKDSGPGVTRYCAALLFAASATLCKEVGITVFGLMAGGEVVRFFEEREWRQRKRKLWQRRRSGVISTARSRGIWRRQALREYWRCRFMMRVPAAAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFS 300          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: A0A836CIX5_9STRA (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX5_9STRA)

HSP 1 Score: 220 bits (561), Expect = 6.980e-61
Identity = 147/347 (42.36%), Postives = 193/347 (55.62%), Query Frame = 1
Query:  571 RYCAALLFAACATLCKEVGITVFGLMVGGEVVRFFEEREW--RQRKRKLWQRRRSGVIASAGKHETRLKQALREYWRCRFMMRVPAAAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVACCDTVVMWGLALIVVPFLPASNILFPVGAVVAERLLYLPSLGVCVLAKEK--QGVLPSRRVLSLR-----GPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLRRAVEVGP 1584
            R+ AALL   CA  CKE G+TVFG+M   E + +   R W  R+ K KLW+R R+ V  +   ++T     L       F M     AAA VV            H+ LH GA VREWG+LENDI+I  SR ER LSYAFTH +YA KLLWP  L YDWG+SCIPHV S  D  NL  LALY++++AA +  +A  +  ++  L+L+++PFLPA+ + FP+G V+AERLLY+PSLG C L          P +     R     G +    R              F    L   +D+ + R     A +VCP GIK+LNNLA+ +L  + AGRA ELL RA+E+ P
Sbjct:    2 RHAAALLLGLCAAACKETGVTVFGVMAAWEGI-YLLGRYWYPRKAKLKLWERARTAVQIA---YQTEGLSPL-------FRMGSAVMAAAAVVIG----------HIWLHAGAPVREWGILENDIAIASSRLERTLSYAFTHWMYAWKLLWPFRLSYDWGYSCIPHVVSPLDWRNLGPLALYTALIAATLKGLASGNAPLLRSLSLLLIPFLPAAQVAFPIGTVLAERLLYVPSLGACALIAGLCCGSFSPPQTSKHARDGGGGGKLSNGARNN------------FNKKKLAGSRDFGTPRACIAGALEVCPHGIKSLNNLAMTLLTPEGAGRAGELLDRALELYP 315          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: A0A7S2W3Q3_9STRA (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3Q3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.950e-46
Identity = 110/275 (40.00%), Postives = 153/275 (55.64%), Query Frame = 1
Query:  823 AAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVACCDTVVMWGLALIVVPFLPASNILFPVGAVVAERLLYLPSLG-------------------VCVLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGML--NVKEAGRAEELLRRAVEVGP 1584
            + AARV  +T     + + H  LH    + +W  LENDI++LPS   R LSY + H  Y  KL WP  LCYD GFSCIP V S+ D  NL +L LY+S+ A VV+A+A    +++W LAL++VPF+PAS++ FPVG V+ ERLLYLPS G                   +  L  + +G       + LRG  ++    T V+VL+L         ++ R  DW SE  LFESA +VCP  +K LNNLA+ +L  + +   RA  +L  A+ + P
Sbjct:    6 SVAARVALSTAAVAGVFFAHTSLHGDQLLYQWTELENDIALLPSLQARVLSYGYVHVRYLLKLAWPFDLCYDHGFSCIPRVESIWDQNNLLTLWLYASLAAVVVYAIASKHKLLLWALALLIVPFVPASHVAFPVGTVLGERLLYLPSSGFVLASALLLVDGLLLLTDQIQALTSKLKGPKSGGSKVKLRGGAIVS---TVVLVLMLG---VHARHSVHRSADWTSELRLFESALQVCPRSLKVLNNLALRLLTESPESTRRASLILDEALSISP 274          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: A0A3R7YI94_9STRA (Dolichyl-phosphate-mannose--protein mannosyltransferase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7YI94_9STRA)

HSP 1 Score: 145 bits (365), Expect = 9.090e-35
Identity = 92/224 (41.07%), Postives = 134/224 (59.82%), Query Frame = 1
Query:  916 WGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVACCDTVVMWGLALI-VVPFLPASNILFPVGAVVAERLLYLPSLGVCVLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLRRAVEVGP 1584
            W + EN+ + LPS   +A+SYA  H +Y  KLLWP +LCYD+G++ I  VTS+ D  NLAS   Y +++ AV  + +   T  ++ L ++ + PF+PAS+++FPVG ++AERLLYLPS+G C++         + RVL    P   P +  A++ L+LA  T   + T+RR  DW  E TLF+SA  V P  +K L NL   +L  K+A  A   L RAV + P
Sbjct:   24 WSIYENEFAHLPSFVSKAMSYAHVHTLYLWKLLWPQYLCYDYGWNTIHAVTSIYDVRNLASSVAYMAVVGAVGTSASHRRTSPLFVLLVLGICPFVPASHVMFPVGTILAERLLYLPSVGFCLVVGYA-----TERVLLAATPASKP-KLVALLGLVLAVAT---SRTIRRNLDWHDEHTLFQSALSVAPTSVKVLTNLGQDILP-KDARTAVLYLERAVALMP 237          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: A0A485KTG6_9STRA (Aste57867_11614 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTG6_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.390e-34
Identity = 96/228 (42.11%), Postives = 135/228 (59.21%), Query Frame = 1
Query:  913 EWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVAC--CDTVVMWGLALIVVPFLPASNILFPVGAVVAERLLYLPSLGVCVLAKEKQGVL--PSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLRRAVEVGP 1584
            +W  +EN+I++LP    RAL+ A THA Y  K++WP HLCYD+G+  IP + S+ DP NL +L  Y+++LA VV A+        ++  +A   VPF+PA+N+LFPVG +VAERLLY PS+GV  LA     V    S RV     P  +P    AV  ++LA      A ++RR  DW +E  LFE++ +V P   K L+NL+  +LN  +  RA   L RA+ V P
Sbjct:  274 QWTAMENNIALLPPGLARALTTAHTHAWYLYKIVWPQHLCYDYGYKTIPTIESITDPRNLLTLLAYAAVLALVVVAIRSLRATPALLLMVAFGAVPFVPAANVLFPVGTIVAERLLYFPSVGVSFLAGYAADVALCQSHRV----HPTWMPPLLYAVGGVVLAIAA---ARSVRRNMDWANEHALFEASIRVAPWSTKVLSNLSKVLLN-GDPPRAAAYLDRALTVLP 493          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: A0A3R6WRM3_9STRA (DUF1736 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6WRM3_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.560e-34
Identity = 92/224 (41.07%), Postives = 133/224 (59.38%), Query Frame = 1
Query:  916 WGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVACCDTVVMWGLALI-VVPFLPASNILFPVGAVVAERLLYLPSLGVCVLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLRRAVEVGP 1584
            W + EN+ + LPS   +A+SYA  H +Y  KLLWP +LCYD+G++ I  VTS+ D  NLAS   Y +++ AV  + +   T  ++ L ++ + PF+PAS++LFPVG ++AERLLYLPS+G C++         + RVL        P +  A++ L+LA  T   + T+RR  DW  E TLF+SA  V P  +K L NL   +L  K+A  A   L RAV + P
Sbjct:   24 WSIYENEFAHLPSFVSKAMSYAHVHTLYLWKLLWPQYLCYDYGWNTIHAVTSIYDVRNLASSVAYMAVVGAVGTSASHRRTSPLFVLLVLGICPFVPASHVLFPVGTILAERLLYLPSVGFCLVVGYA-----TERVLLAATAATKP-KLVALLGLVLAVAT---SRTIRRNLDWHDEHTLFQSALSVAPTSVKVLTNLGQDILP-KDARTAVLYLERAVALMP 237          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: K3WA60_GLOUD (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA60_GLOUD)

HSP 1 Score: 146 bits (369), Expect = 7.710e-34
Identity = 103/316 (32.59%), Postives = 157/316 (49.68%), Query Frame = 1
Query:  583 ALLFAACATLCKEVGITVFGLMVGGEVVRFFEEREWRQRKRKLWQRRRSGVIASAGKHETRLKQALREYWRCRFMMRVPAAAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVA-CCDTVVMWGLALIVVPFLPASNILFPVGAVVAERLLYLPSLGVCVLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLN 1527
            AL+ A  A+LCKE+G T FGL V  +V+ +F  +                   SA   E ++K+           +RV      R+   T+F +L   + V ++   R  +W +L N++ +  S+  R LSYA  HA Y  KL+WP  LC+D+GF  +P +T++ DP NL +LA YS +L  VV  +     + ++  +A  V+PF+PASN+ FPVG VVAERLLY PS+G C+L             L ++  + +   R                    R  +W SE +LFE+A K+ P   K L+N+   +L+
Sbjct:  200 ALITAVGASLCKELGFTAFGLFVAYDVIFYFSSQY------------------SADDREGKIKR-----------IRV---IGQRIAVVTVFVLLFAVVRVWINGEHRQMKWTILANNVVVQRSKFTRMLSYAHIHAWYLWKLVWPRSLCFDYGFKTVPVITTIWDPLNLYTLAAYSVVLVGVVVGIKQIASSPLLMCIAFGVIPFIPASNLFFPVGTVVAERLLYFPSVGFCLLIG-----------LKVQDALAISYNRL-------------------RNAEWASETSLFEAAVKIAPMNNKVLSNVGKTLLH 453          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: A0A1V9ZDF0_9STRA (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDF0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 8.500e-34
Identity = 117/335 (34.93%), Postives = 161/335 (48.06%), Query Frame = 1
Query:  574 YCAALLFAACATLCKEVGITVFGLMVGGEVVRFFEEREWRQRKRKLWQRRRSGVIASAGKHETRLKQALREYWRCRFMMRVPAAAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVACCDTVVMWGL-ALIVVPFLPASNILFPVGAVVAERLLYLPSLGVC-VLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLRRAV 1572
            Y  +L     ATLCKE+G T  G+ V  E+ R        Q  +  W R    +  + G                R M+ V   +AA            +   + L+   R+  W V+ENDIS+LP    R L+   THA Y  KLLWP HLCYD+GF  +P V S  D  NL +LA Y  ++  +        +  +W L A  V PF+PA+N+LFPVG +VAERLLY PS+G C VL     G + S        P  L V     +VLL++   Y    ++ R  +W +E TLFE++  V P  +K L+NL+  +L   +  RA   L RAV
Sbjct:  180 YTLSLALVVAATLCKELGATTLGIFVALEIARIVA-----QPSKDSWYR--DPITRACG---------------LRAMLLVVGGSAA------------ITGRIALNGPDRLYVWTVMENDISLLPWGAPRLLTTLHTHAWYLWKLLWPQHLCYDYGFRTLPVVESWRDGRNLLTLAAYVFMVLLLYLCWRQRRSSPLWQLVAFGVFPFVPAANVLFPVGTIVAERLLYFPSVGFCLVLGYVADGAIAS-------APCRLQVLLQGALVLLVSAGIY---RSITRNAEWATEDTLFEASVAVAPWSVKVLSNLSKTLLG-SDPQRAAAYLERAV 469          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: A0A397C870_9STRA (DUF1736 domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C870_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.500e-33
Identity = 92/224 (41.07%), Postives = 133/224 (59.38%), Query Frame = 1
Query:  916 WGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVACCDTVVMWGLALI-VVPFLPASNILFPVGAVVAERLLYLPSLGVCVLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLRRAVEVGP 1584
            W + EN+ + LPS   +A+SYA  H +Y  KLLWP +LCYD+G++ I  VTS+ D  NLAS   Y +++ AV  + +   T  ++ L ++ + PF+PAS++LFPVG ++AERLLYLPS+G C++         + RVL        P +  A++ L+LA  T   + T+RR  DW  E TLF+SA  V P  +K L NL   +L  K+A  A   L RAV + P
Sbjct:  221 WSIYENEFAHLPSFVSKAMSYAHVHTLYLWKLLWPQYLCYDYGWNTIHAVTSIYDVRNLASSVAYMAVVGAVGTSASHRRTSPLFVLLVLGICPFVPASHVLFPVGTILAERLLYLPSVGFCLVVGYA-----TERVLLAATAATKP-KLVALLGLVLAVAT---SRTIRRNLDWHDEHTLFQSALSVAPTSVKVLTNLGQDILP-KDARTAVLYLERAVALMP 434          
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Match: W4GUN4_9STRA (Dolichyl-phosphate-mannose--protein mannosyltransferase n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GUN4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.350e-33
Identity = 92/224 (41.07%), Postives = 134/224 (59.82%), Query Frame = 1
Query:  916 WGVLENDISILPSRTERALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYSSILAAVVFAVACCDTVVMWGLALI-VVPFLPASNILFPVGAVVAERLLYLPSLGVCVLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAGTLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLRRAVEVGP 1584
            W + EN+ + LPS   +A+SYA  H +Y  KLLWP +LCYD+G++ I  VTS+ D  NLAS   Y +++ AV  + +   T  ++ L ++ + PF+PAS+++FPVG ++AERLLYLPS+G C++         + RVL    P   P +  A++ L+LA  T   + T+RR  DW  E TLF+SA  V P  +K L NL   +L  K+A  A   L RAV + P
Sbjct:  242 WSIYENEFAHLPSFVSKAMSYAHVHTLYLWKLLWPQYLCYDYGWNTIHAVTSIYDVRNLASSVAYMAVVGAVGTSASHRRTSPLFVLLVLGICPFVPASHVMFPVGTILAERLLYLPSVGFCLVVGYA-----TERVLLAATPASKP-KLVALLGLVLAVAT---SRTIRRNLDWHDEHTLFQSALSVAPTSVKVLTNLGQDILP-KDARTAVLYLERAVALMP 455          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14457.3426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTI0_ECTSI7.050e-10690.76DUF1736 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CIX5_9STRA6.980e-6142.36Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A7S2W3Q3_9STRA4.950e-4640.00Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A3R7YI94_9STRA9.090e-3541.07Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A485KTG6_9STRA1.390e-3442.11Aste57867_11614 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R6WRM3_9STRA5.560e-3441.07DUF1736 domain-containing protein n=2 Tax=Aphanomy... [more]
K3WA60_GLOUD7.710e-3432.59Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A1V9ZDF0_9STRA8.500e-3434.93Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A397C870_9STRA1.500e-3341.07DUF1736 domain-containing protein (Fragment) n=3 T... [more]
W4GUN4_9STRA2.350e-3341.07Dolichyl-phosphate-mannose--protein mannosyltransf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14457contigEcto-sp13_S_contig14457:484..3319 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score331.3
Seed ortholog evalue7.4e-88
Seed eggNOG ortholog2880.D8LTI0
Model size1584
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.cellular component assembly
EggNOG OGsCOG0457@1,KOG1124@2759
Cds size1371
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14457.3426.1prot_Ecto-sp13_S_contig14457.3426.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14457 484..3106 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462771.421904-CDS-Ecto-sp13_S_contig14457:483..7791681462771.421904-CDS-Ecto-sp13_S_contig14457:483..779Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14457 484..779 -
1681462771.4366677-CDS-Ecto-sp13_S_contig14457:1145..11851681462771.4366677-CDS-Ecto-sp13_S_contig14457:1145..1185Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14457 1146..1185 -
1681462771.4449654-CDS-Ecto-sp13_S_contig14457:1518..17171681462771.4449654-CDS-Ecto-sp13_S_contig14457:1518..1717Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14457 1519..1717 -
1681462771.4533536-CDS-Ecto-sp13_S_contig14457:2063..21591681462771.4533536-CDS-Ecto-sp13_S_contig14457:2063..2159Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14457 2064..2159 -
1681462771.4620101-CDS-Ecto-sp13_S_contig14457:2355..30451681462771.4620101-CDS-Ecto-sp13_S_contig14457:2355..3045Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14457 2356..3045 -
1681462771.4704616-CDS-Ecto-sp13_S_contig14457:3056..31061681462771.4704616-CDS-Ecto-sp13_S_contig14457:3056..3106Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14457 3057..3106 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462771.4792628-UTR-Ecto-sp13_S_contig14457:3106..33191681462771.4792628-UTR-Ecto-sp13_S_contig14457:3106..3319Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14457 3107..3319 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14457.3426.1

>prot_Ecto-sp13_S_contig14457.3426.1 ID=prot_Ecto-sp13_S_contig14457.3426.1|Name=mRNA_Ecto-sp13_S_contig14457.3426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=457bp
MTPPATTLGALSPLKHPNDATPEARGSIVTMETMKPPAIALEAPLGYVSS
REHNDEAEKGANVVHRRASAMAGRASCPPSPLGFKPAMTSKMVSGRGAPS
MRHGAAIVKEEKDSGPGVTRYCAALLFAACATLCKEVGITVFGLMVGGEV
VRFFEEREWRQRKRKLWQRRRSGVIASAGKHETRLKQALREYWRCRFMMR
VPAAAAARVVSATIFAVLLVYLHVRLHEGARVREWGVLENDISILPSRTE
RALSYAFTHAVYASKLLWPTHLCYDWGFSCIPHVTSLADPANLASLALYS
SILAAVVFAVACCDTVVMWGLALIVVPFLPASNILFPVGAVVAERLLYLP
SLGVCVLAKEKQGVLPSRRVLSLRGPVLLPVRRTAVMVLLLAWTTYFGAG
TLRRCKDWRSERTLFESAFKVCPDGIKTLNNLAVGMLNVKEAGRAEELLR
RAVEVGP
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mRNA from alignment at Ecto-sp13_S_contig14457:484..3319-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14457.3426.1 ID=mRNA_Ecto-sp13_S_contig14457.3426.1|Name=mRNA_Ecto-sp13_S_contig14457.3426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2836bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14457:484..3319- (Ectocarpus species13 EcNAP12_S_4_19m)
CTACGACTGAAGAAGCAACGTATCTCACGGCGGCTCGCGCGGATGTTGGA ATGGCGGCGGACACTGTCACCCGTACGGCAGTCACGGTCGATACCAGTGA CAACGAAGGAGAGACTTTTGTGACCCCGGCCTTACACAGCGAAAGCTACT TCGCCAAAACACAAGAACCAGGCCAAAATCTGCTGTCTGGCAACAACGAT TTGTCCAGCCTCGATGACACCCCCGGCAACGACGCTGGGCGCACTGTCGC CGCTGAAGCATCCGTCGAAAGCAGCAACGACGCTACGCCAGAAGCTAGGG GCAGTATTGTTACGATGGAAACGATGAAACCACCCGCAATAGCTCTAGAA GCACCTCTTGGATACGTTTCCAGCAGAGAACACAATGACGAAGCGGAGAA AGGGGCTAATGTTGTGCACCGGCGGGCATCGGCGATGGCGGGAAGAGCTT CTTGTCCCCCTTCCCCTCTGGGCTTTAAACCTGCCATGACCTCGAAAATG GTTTCGGGGAGAGGAGCTCCCTCGATGCGTCATGGAGCTGCTATCGTCAA GGAGGAAAAAGACAGCGGGCCCGGAGTGACGAGGTATTGTGCGGCGCTTC TTTTCGCTGCCTGTGCAACGCTGTGCAAGGAGGTAGGCATCACGGTGTTC GGGCTCATGGTCGGAGGGGAGGTTGTGCGCTTCTTCGAAGAGCGCGAGTG GCGCCAGCGAAAGCGGAAGCTGTGGCAACGTCGGCGATCGGGGGTCATAG CATCAGCGGGGAAGCATGAAACTAGGCTGAAACAGGCGTTACGGGAATAC TGGCGCTGCCGGTTTATGATGCGGGTACCGGCGGCTGCGGCGGCGAGAGT CGTGTCAGCGACAATCTTTGCCGTGTTGCTGGTGTATCTACACGTGCGAT TGCACGAGGGGGCGCGGGTTCGAGAGTGGGGGGTTCTAGAAAACGACATT TCAATTTTGCCAAGGTGGGTTCGTTCGGGCGTCGCTAATGCCCCCCTTCA CAACCCCTAAGCGTTTTCGCCTAAATATGCAATCCCGCCCAGCTAGCCTC GATCGCCGCGTCATACGCCATGTTGTCCGTCGCGAAACGTGAGCTGTTTA TAGTGACCCCACGGCCGTCGGTTATTGCGTCTGTAAATGCTACTGTCCTA CACTTTACAGTCGGACGGAGAGAGCGCTGTCGTACGCCTTCACGCACGCC GTGTACGCCTCAAAGCTCCTGTGGCCGACCCACTTGTGCTACGACTGGGG TTTTAGGTGCGAGGAACTGCCCTTGAAAGAAACGCCCCAAATGTTTCTAA TAGGTACACACCACTTAAATCTACATAGTTCCTCATTTATTTGGGGTCCT CACGGACGTGCACGGTCTGCTATGCCACGGAATACTAGGAGGGTGGGGCA CAGGCATGCTACTGCGAGAAGGGGGAAAAGTGGCAAAAAAGAATGCCTGT GAATTGAGACACAGAACCTTCTGCTCGGCCCACTCTCGCGATTGATTGAT CTGCCGGTCAAAGCATGTGTCACGTTGTGTTCTCATACCTTACCCTGTCC TCTCCCCTACCGCGTTGCCGCTGCTCGATCGAACAACCAACCGAAACACC AGCTGTATCCCCCACGTCACGTCGTTGGCCGACCCGGCTAACCTCGCTTC GCTCGCGCTGTACTCTTCGATCCTGGCTGCTGTGGTCTTCGCTGTGGCTT GCTGCGACACAGTAGTCATGTGGGGACTGGCCTTAATCGTGGTGCCCTTC TTACCGGCCTCGAATATTCTGTTCCCCGTCGGCGCAGTGGTTGCGGAGCG GGTACGTACGTGGGAACGGACTCGGTGGGAACGGGAGAGCGGGGAAACCC ATTCGGTGTTCATCTTGGTCTTGAGGCCGCAAACCATGCGTCGCGGCTGA TGCCGAACACCTTACTCGTGCGAAGTCATTTTCATCGGTTTAGTAACCCC TCGAAAACACCCGGTCGTGTTTCAAAAACAATTTCCGAGGAGCAAGGTTT GGGGGGTCGTATCGTGCGCGATACTCTTCACTTTAGCAAGAGGTTTCTCG CCCAGATCGTATCGAGACCCGTCTCTTGTTTGTGTTCTCAAGTGCTACCA CCCCCCGCCTTGCCGTCTTTCGTCGTTCACACAGCTTCTGTATCTGCCAA GCCTGGGCGTCTGTGTTCTCGCCAGTTGCAACCTGCGTTGCCACGACGGG ACAAAATCATCATACGGAGAAACTGCTGCACCTGGCAACGAGAAAATTAG TGTCAAACACGCGGAAAATTCGAACTCGAACCGAGGAAATGTTTCAACCT TTTCCTCCGAGGGCGGCGGAGAGGACAAGGAGACCAATCGACCCTTGTGT TCGCCCTCTTGTGGTGGAACAATCACATCGAATTCGTTCGGATCGCCTAA AAACGAGAGGGGAAGCCAGCAGGATCGGTCGACGATTCCCGGGCAGCCTG CAGTCCTTCCCTCCTCACCGCGACCTTTGGCAGCAAGGGCACCTGCGTGT AGCAGCAGCAGCGCGCTCCTTCCTGACCCAAGTGCAAGAGAGGAGAAGCA GGGTGTTCTACCCTCGCGGCGGGTGCTCTCTCTCAGAGGTCCGGTCCTAC TGCCCGTAAGACGCACCGCCGTGATGGTTTTGTTGTTGGCCTGGACGACG TACTTTGGCGCGGGGACGCTGCGGCGGTGCAAGGACTGGAGATCCGAGAG AACTCTGTTCGAATCGGCCTTTAAAGTGTGCCCCGATGGGATCAAGACAC TCAACAACCTCGCCGTGGGCATGCTCAACGTGAAAGAGGCCGGCCGCGCT GAGGAGCTTCTTCGGAGGGCCGTCGAGGTTGGTCCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14457:484..3319-

>mRNA_Ecto-sp13_S_contig14457.3426.1 ID=mRNA_Ecto-sp13_S_contig14457.3426.1|Name=mRNA_Ecto-sp13_S_contig14457.3426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1371bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14457:484..3319- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACACCCCCGGCAACGACGCTGGGCGCACTGTCGCCGCTGAAGCATCC
CAACGACGCTACGCCAGAAGCTAGGGGCAGTATTGTTACGATGGAAACGA
TGAAACCACCCGCAATAGCTCTAGAAGCACCTCTTGGATACGTTTCCAGC
AGAGAACACAATGACGAAGCGGAGAAAGGGGCTAATGTTGTGCACCGGCG
GGCATCGGCGATGGCGGGAAGAGCTTCTTGTCCCCCTTCCCCTCTGGGCT
TTAAACCTGCCATGACCTCGAAAATGGTTTCGGGGAGAGGAGCTCCCTCG
ATGCGTCATGGAGCTGCTATCGTCAAGGAGGAAAAAGACAGCGGGCCCGG
AGTGACGAGGTATTGTGCGGCGCTTCTTTTCGCTGCCTGTGCAACGCTGT
GCAAGGAGGTAGGCATCACGGTGTTCGGGCTCATGGTCGGAGGGGAGGTT
GTGCGCTTCTTCGAAGAGCGCGAGTGGCGCCAGCGAAAGCGGAAGCTGTG
GCAACGTCGGCGATCGGGGGTCATAGCATCAGCGGGGAAGCATGAAACTA
GGCTGAAACAGGCGTTACGGGAATACTGGCGCTGCCGGTTTATGATGCGG
GTACCGGCGGCTGCGGCGGCGAGAGTCGTGTCAGCGACAATCTTTGCCGT
GTTGCTGGTGTATCTACACGTGCGATTGCACGAGGGGGCGCGGGTTCGAG
AGTGGGGGGTTCTAGAAAACGACATTTCAATTTTGCCAAGTCGGACGGAG
AGAGCGCTGTCGTACGCCTTCACGCACGCCGTGTACGCCTCAAAGCTCCT
GTGGCCGACCCACTTGTGCTACGACTGGGGTTTTAGCTGTATCCCCCACG
TCACGTCGTTGGCCGACCCGGCTAACCTCGCTTCGCTCGCGCTGTACTCT
TCGATCCTGGCTGCTGTGGTCTTCGCTGTGGCTTGCTGCGACACAGTAGT
CATGTGGGGACTGGCCTTAATCGTGGTGCCCTTCTTACCGGCCTCGAATA
TTCTGTTCCCCGTCGGCGCAGTGGTTGCGGAGCGGCTTCTGTATCTGCCA
AGCCTGGGCGTCTGTGTTCTCGCCAAGGAGAAGCAGGGTGTTCTACCCTC
GCGGCGGGTGCTCTCTCTCAGAGGTCCGGTCCTACTGCCCGTAAGACGCA
CCGCCGTGATGGTTTTGTTGTTGGCCTGGACGACGTACTTTGGCGCGGGG
ACGCTGCGGCGGTGCAAGGACTGGAGATCCGAGAGAACTCTGTTCGAATC
GGCCTTTAAAGTGTGCCCCGATGGGATCAAGACACTCAACAACCTCGCCG
TGGGCATGCTCAACGTGAAAGAGGCCGGCCGCGCTGAGGAGCTTCTTCGG
AGGGCCGTCGAGGTTGGTCCT
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