prot_Ecto-sp13_S_contig14451.3423.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14451.3423.1
Unique Nameprot_Ecto-sp13_S_contig14451.3423.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14451.3423.1 vs. uniprot
Match: D8LGJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ0_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 2.630e-20
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:    5 DGLGGWVMSYVGPDGETKFKMIGPTGNCYGYSKARSGAYRLGLYPRSEGG 54
            DG+GGWVM   GPDGE KFKM GPTGNCY YSKARSGAYR GL+PRSEGG
Sbjct:    3 DGVGGWVMPEAGPDGEAKFKMTGPTGNCYDYSKARSGAYRFGLHPRSEGG 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14451.3423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGJ0_ECTSI2.630e-2082.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14451contigEcto-sp13_S_contig14451:2373..4340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14451.3423.1mRNA_Ecto-sp13_S_contig14451.3423.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14451 2373..4340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14451.3423.1 ID=prot_Ecto-sp13_S_contig14451.3423.1|Name=mRNA_Ecto-sp13_S_contig14451.3423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
QSCRDGLGGWVMSYVGPDGETKFKMIGPTGNCYGYSKARSGAYRLGLYPR
SEGGGGPPLTHVAHKRRRDAAASDEAPAAKRRRCPTSSEEDHCHFFQAAG
RAGKSRTRGSPREGSGGGGGSSRCGGGRESYGGGRESYGGGSGSCGGGSG
RCCGGSGSCGGGNGRCGGGSGGHSEGRGGDSGSIGGKDSSTPSGGSSCGQ
GG*
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