prot_Ecto-sp13_S_contig14438.3412.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14438.3412.1
Unique Nameprot_Ecto-sp13_S_contig14438.3412.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14438.3412.1 vs. uniprot
Match: D7FW96_ECTSI (Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW96_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.610e-59
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 
Query:    1 MEHPFSKTEDHRITACLAVVSYCSLGCGVKVRKMDVDLHQEKHCERKTLRTLSKMIDCPLGCGHLILRQWEFQHRTFDCPKRPALCPRGCSA 92
            MEHPFSKTEDHRITACLAVVSYCSLGCGVKVRKMD+DLHQEKHCERKTLRTLSKMIDCPLGCGHLILRQWEFQHRTFDCPKRPALCPRGCSA
Sbjct:  188 MEHPFSKTEDHRITACLAVVSYCSLGCGVKVRKMDMDLHQEKHCERKTLRTLSKMIDCPLGCGHLILRQWEFQHRTFDCPKRPALCPRGCSA 279
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BLAST of mRNA_Ecto-sp13_S_contig14438.3412.1 vs. uniprot
Match: A0A6H5L2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H6_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.240e-57
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0 
Query:    1 MEHPFSKTEDHRITACLAVVSYCSLGCGVKVRKMDVDLHQEKHCERKTLRTLSKMIDCPLGCGHLILRQWEFQHRTFDCPKRPALCPRGCSA 92
            MEHPFSKT DHRIT CLAVVSYCSLGCGVKVRKMDVDLHQEK+CERKTLRTLSKMIDCPLGCGHLILRQWEFQHRTFDCPKRPALCPRGCSA
Sbjct:  755 MEHPFSKTGDHRITTCLAVVSYCSLGCGVKVRKMDVDLHQEKYCERKTLRTLSKMIDCPLGCGHLILRQWEFQHRTFDCPKRPALCPRGCSA 846
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14438.3412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW96_ECTSI1.610e-5998.91Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ect... [more]
A0A6H5L2H6_9PHAE1.240e-5796.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14438contigEcto-sp13_S_contig14438:2322..3742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14438.3412.1mRNA_Ecto-sp13_S_contig14438.3412.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14438 2322..3745 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14438.3412.1 ID=prot_Ecto-sp13_S_contig14438.3412.1|Name=mRNA_Ecto-sp13_S_contig14438.3412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MEHPFSKTEDHRITACLAVVSYCSLGCGVKVRKMDVDLHQEKHCERKTLR
TLSKMIDCPLGCGHLILRQWEFQHRTFDCPKRPALCPRGCSA
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