prot_Ecto-sp13_S_contig14438.3411.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14438.3411.1
Unique Name	prot_Ecto-sp13_S_contig14438.3411.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	84

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14438.3411.1 vs. uniprot
Match: A0A6H5L2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H6_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.710e-43
Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0

Query:    1 GHVRSVRTLVKIGHAEVNHETRAGKTPLIEAARHGRTVVVRLLMELRAVISYKNRRGQTATWWANRLGHHDCALLMTREVKAET 84
            GHVRSVRTLV IGHAEVNHETRAGKTPLIEAARHGRT VVRLL+ELRAVISYKNRR QTATWWANRLGH DCALLMTREVKAET
Sbjct:  867 GHVRSVRTLVNIGHAEVNHETRAGKTPLIEAARHGRTAVVRLLIELRAVISYKNRRRQTATWWANRLGHRDCALLMTREVKAET 950

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BLAST of mRNA_Ecto-sp13_S_contig14438.3411.1 vs. uniprot
Match: D7FW96_ECTSI (Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW96_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 2.810e-42
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0

Query:    1 GHVRSVRTLVKIGHAEVNHETRAGKTPLIEAARHGRTVVVRLLMELRAVISYKNRRGQTATWWANRLGHHDCALLMTREVKAET 84
            GHVRSVRTLVKIGHAEVNHETRAGKTPLIEA    RT VVR+LME RAVISYKNRRGQTATWWANRLGHHDCALLMTREVKAET
Sbjct:  403 GHVRSVRTLVKIGHAEVNHETRAGKTPLIEAXXXXRTAVVRVLMEFRAVISYKNRRGQTATWWANRLGHHDCALLMTREVKAET 486

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BLAST of mRNA_Ecto-sp13_S_contig14438.3411.1 vs. uniprot
Match: A0A1V9ZCW0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCW0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 4.590e-6
Identity = 29/86 (33.72%), Postives = 52/86 (60.47%), Query Frame = 0

Query:    1 GHVRSVRTLVKIGHAEVN--HETRAGKTPLIEAARHGRTVVVRLLMELRAVISYKNRRGQTATWWANRLGHHDCALLMTREVKAET 84
            GH    + L+++G A+++     ++  TPLIEAAR GR+ +V+LL++ RA +S+++  G T   WA R G +   + M +  + +T
Sbjct:  451 GHANIAQYLIQLG-ADIDAIDTIQSKTTPLIEAARAGRSDIVKLLLDERACVSHQDSHGDTPLHWAARRGWNSLVIYMAQHAQQQT 535

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BLAST of mRNA_Ecto-sp13_S_contig14438.3411.1 vs. uniprot
Match: UPI0018ED384F (KN motif and ankyrin repeat domain-containing protein 4-like n=3 Tax=Centrarchoidei TaxID=1545897 RepID=UPI0018ED384F)

HSP 1 Score: 50.1 bits (118), Expect = 4.160e-5
Identity = 30/79 (37.97%), Postives = 48/79 (60.76%), Query Frame = 0

Query:    1 GHVRSVRTLVKIGHAEVNHETRAGKTPLIEAARHGRTVVVRLLMELRAVISYKNRRGQTATWWANRLGH-HDCALLMTR 78
            G +  VR L+++G+  + H ++ G+T L  A RHGR V+VRLL+   A  + ++ +G TA  +A+  GH H   LL+ R
Sbjct:  765 GGMEVVRKLMELGNVNI-HSSQTGQTALHLAVRHGRVVMVRLLLSCGADTNIQDNQGTTALMFASERGHTHIARLLLER 842

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14438.3411.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14438.3411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5L2H6_9PHAE	1.710e-43	94.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FW96_ECTSI	2.810e-42	91.67	Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ect...	[more]
A0A1V9ZCW0_9STRA	4.590e-6	33.72	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
UPI0018ED384F	4.160e-5	37.97	KN motif and ankyrin repeat domain-containing prot...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 3..76 e-value: 7.9E-8 score: 32.8
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..84 score: 12.859
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..83 e-value: 8.4E-16 score: 60.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 1..76
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 23..55 score: 9.938

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14438	contig	Ecto-sp13_S_contig14438:585..836 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14438.3411.1	mRNA_Ecto-sp13_S_contig14438.3411.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14438 585..836 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14438.3411.1 ID=prot_Ecto-sp13_S_contig14438.3411.1|Name=mRNA_Ecto-sp13_S_contig14438.3411.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
GHVRSVRTLVKIGHAEVNHETRAGKTPLIEAARHGRTVVVRLLMELRAVI
SYKNRRGQTATWWANRLGHHDCALLMTREVKAET

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt