prot_Ecto-sp13_S_contig14437.3410.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14437.3410.1
Unique Nameprot_Ecto-sp13_S_contig14437.3410.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length555
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14437.3410.1 vs. uniprot
Match: A0A6H5LBA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 568 bits (1464), Expect = 1.960e-191
Identity = 414/559 (74.06%), Postives = 430/559 (76.92%), Query Frame = 0 
Query:    1 MSETPASGPCGLVAGCTGDKQVTVITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQXXXXXXXQPETGRKRDHAETMTHERPQPQPLVAAPGDTRESAGHGLAAVRGNTPSDAAATPQAAXXXXXXXXXXXXXXXXPVEEADKPRYSDSATYPSPPAEPEVNLAAALPPSVENGPGGGSAGGATGQALMPSALPAGTGSTTLVSLAAGGGHEASVTHAAPAAA-PLPGARQPMPMAGVATXXXXXXXXXXXXXXXXXXXXXXTGQAVALYGATPVSGVPQAALWPQQTVLPLAGHQQQLLPQQALQMAAISAATSAMES-HQLPPLQXXXXXXXXXXXXXXXXXXXXXXXLVXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGLPGGTVIRVGPAGAPAGGPAVSTHEAVLTLQGQQQQHHEMGVSAVAQPAVAHP---PGEGAPTSPTASIHGTPAAIGQVPYPVWMGPVLPEQQQDSRGTGXXXXXXXXXXXXSGVMGGGXXXXXXXXGGIDLNGRLLQHPAYVMHAGGSAESLETAERRRQE 554
            MSETPA GPCGLVAGC GDKQVT ITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQ       QPE+GRKRDHAETMTHERPQPQPLVA PGDTRE  GHGLAA+RGNTPSDAA+TPQAA XXXXXXXXXXXX   PVEEAD   YSDSA YPSPPA PEVNLAAALPPS+ENG GG SAGGATGQALMP ALPAGTGSTTLVS AA GG+EASV  AA AAA PLPGA QP+P+AGVAT   XXXXXXXXXXXXXXXXXXX   AVALYGATPVSGVPQAALW                PQQALQMAA+ AATSAME+ +QLPPLQ  XXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXX               AGAGL GGTVIRVGPAGAPAGGPAVS HE V+ L                          PGEGAPTSPTASIHG PAA+GQ+PYPVWMGPVLP+QQQDS+G G            SGVMGG         GGIDLNGRLLQHPAYVMHAGG+ ESLETAERRRQE
Sbjct:    1 MSETPAVGPCGLVAGCAGDKQVTFITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQQQQL---QPESGRKRDHAETMTHERPQPQPLVAPPGDTREPVGHGLAAMRGNTPSDAASTPQAATXXXXXXXXXXXX---PVEEADGSTYSDSAPYPSPPAAPEVNLAAALPPSIENGAGGESAGGATGQALMPPALPAGTGSTTLVSPAAEGGNEASVAQAAAAAAAPLPGASQPVPLAGVATATQXXXXXXXXXXXXXXXXXXXXXXAVALYGATPVSGVPQAALW----------------PQQALQMAAMEAATSAMEAANQLPPLQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------AGAGLLGGTVIRVGPAGAPAGGPAVSMHETVVPLXXXXXXXXXXXXXXXXXXXXXXXXXGPGEGAPTSPTASIHGAPAAVGQLPYPVWMGPVLPQQQQDSQGAGGSGVSARSPKSRSGVMGGRKGVGLGGGGGIDLNGRLLQHPAYVMHAGGALESLETAERRRQE 522
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14437.3410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBA6_9PHAE1.960e-19174.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 370..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14437contigEcto-sp13_S_contig14437:714..2378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14437.3410.1mRNA_Ecto-sp13_S_contig14437.3410.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14437 714..2378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14437.3410.1 ID=prot_Ecto-sp13_S_contig14437.3410.1|Name=mRNA_Ecto-sp13_S_contig14437.3410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=555bp
MSETPASGPCGLVAGCTGDKQVTVITQEQLNGLGSLRDVDLFVKLSALRV
GGIWCEDCHQLLFNAASGSKQQQQQQQLQPETGRKRDHAETMTHERPQPQ
PLVAAPGDTRESAGHGLAAVRGNTPSDAAATPQAATASAAAAAAAAAAAA
APVEEADKPRYSDSATYPSPPAEPEVNLAAALPPSVENGPGGGSAGGATG
QALMPSALPAGTGSTTLVSLAAGGGHEASVTHAAPAAAPLPGARQPMPMA
GVATATQAALPLAGAPYALPLYGTAPTGQAVALYGATPVSGVPQAALWPQ
QTVLPLAGHQQQLLPQQALQMAAISAATSAMESHQLPPLQQHQPPPQLQA
ALQHHSAPQQQQQLVQQQQLVQQQQLVQQQQQQQQQQQQQQAGAGLPGGT
VIRVGPAGAPAGGPAVSTHEAVLTLQGQQQQHHEMGVSAVAQPAVAHPPG
EGAPTSPTASIHGTPAAIGQVPYPVWMGPVLPEQQQDSRGTGGSGVSARS
PKSPSGVMGGGRGGGLGGGGGIDLNGRLLQHPAYVMHAGGSAESLETAER
RRQE*
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