prot_Ecto-sp13_S_contig14431.3407.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14431.3407.1
Unique Nameprot_Ecto-sp13_S_contig14431.3407.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14431.3407.1 vs. uniprot
Match: D8LUA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA1_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.380e-110
Identity = 186/206 (90.29%), Postives = 189/206 (91.75%), Query Frame = 0 
Query:    1 MALEVDILSVVLEFVDSLEGAPSSE--AHVVVEGGAECRAVCRSWRITVEKTMVRVLPPMTPVSLAALLVPGRLRGVLLSCQYLGREFHEHAAAAAFVALVSRADAVALRXXXXXXXXXXXXAGAAGAPRGVPSQGVMAEEAAGGETIINNNTSFVCCRVALKRIVGEALDSPAFSWCSALGLDDSRLLESCVGASILVNARWFSG 204
            M LE D+LSVVLEFVDSLEGAP SE  AHVVV+GGAECRAVCRSWRITVEKT+ RVLPPMTPVSLAALLVPGRLRGVLLSCQYLGREFHEHAAAAAFVALVSRADA    XXXXXXXXXXXX   AGAPRGVPSQGVMAEEAAGGE IINNNTSFVCCRVALKRIV EALDSPAFSWCS LGLDDSRLLESCVGAS LVNARWFSG
Sbjct:    1 MTLEADVLSVVLEFVDSLEGAPPSEEVAHVVVQGGAECRAVCRSWRITVEKTIGRVLPPMTPVSLAALLVPGRLRGVLLSCQYLGREFHEHAAAAAFVALVSRADAXXXXXXXXXXXXXXXXXXXAGAPRGVPSQGVMAEEAAGGEGIINNNTSFVCCRVALKRIVREALDSPAFSWCSTLGLDDSRLLESCVGASSLVNARWFSG 206
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14431.3407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUA1_ECTSI1.380e-11090.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14431contigEcto-sp13_S_contig14431:2777..3391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14431.3407.1mRNA_Ecto-sp13_S_contig14431.3407.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14431 2663..3411 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14431.3407.1 ID=prot_Ecto-sp13_S_contig14431.3407.1|Name=mRNA_Ecto-sp13_S_contig14431.3407.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
MALEVDILSVVLEFVDSLEGAPSSEAHVVVEGGAECRAVCRSWRITVEKT
MVRVLPPMTPVSLAALLVPGRLRGVLLSCQYLGREFHEHAAAAAFVALVS
RADAVALRLREAAAAPATAEAGAAGAPRGVPSQGVMAEEAAGGETIINNN
TSFVCCRVALKRIVGEALDSPAFSWCSALGLDDSRLLESCVGASILVNAR
WFSG*
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