prot_Ecto-sp13_S_contig14420.3400.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14420.3400.1
Unique Nameprot_Ecto-sp13_S_contig14420.3400.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length101
Homology
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: A0A6H5JZ77_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 5.300e-61
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0
Query:    1 MMVYIEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNSGNSVCDEANALGL 101
            MMVY EGSSTGVSVSEAEQIEYNSWFADIVHA GMGVGLKNAVELVPILVNKFDFALNEECHEWNEC VYEDTFLAEGKPV+NVEYN GNSVCDEANALGL
Sbjct:  257 MMVYTEGSSTGVSVSEAEQIEYNSWFADIVHAYGMGVGLKNAVELVPILVNKFDFALNEECHEWNECNVYEDTFLAEGKPVYNVEYNLGNSVCDEANALGL 357          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: UPI001F4E8089 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Pseudomonas sp. A3.4 TaxID=2919919 RepID=UPI001F4E8089)

HSP 1 Score: 100 bits (250), Expect = 5.760e-24
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 0
Query:    8 SSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNS-GNSVCDEANALGL 101
            +S G+ +++A+Q+++N W A   HA  + + LKNAVELVP LVN FDFALNE C+ +NEC  Y + F A+GK VF  EY    N +C++ANA G 
Sbjct:  152 NSNGLGLTKADQLDFNRWLASAAHARNLAIALKNAVELVPDLVNHFDFALNESCYRYNECNAY-NAFTAQGKAVFVAEYRKYNNKLCNKANASGF 245          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: A0A1H7R5T2_9GAMM (Glyco_hydro_114 domain-containing protein n=2 Tax=Atopomonas hussainii TaxID=1429083 RepID=A0A1H7R5T2_9GAMM)

HSP 1 Score: 96.7 bits (239), Expect = 2.270e-22
Identity = 49/99 (49.49%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    5 IEGSST--GVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNS-GNSVCDEANALG 100
            I+G S   G+ +SEA+Q+++N W AD  HA  +G+ LKNAVEL+P LVN FDFALNE C+ +NEC  Y   F A+GK VF  EY      +C++A + G
Sbjct:  143 IDGYSNDNGLGLSEADQVDFNRWLADQAHARQLGIALKNAVELIPQLVNHFDFALNESCYRYNECGGY-SAFTAQGKAVFIAEYRKYSTKLCNKAASSG 240          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: A0A1G3E0C0_9GAMM (Glyco_hydro_114 domain-containing protein n=1 Tax=Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43 TaxID=1802005 RepID=A0A1G3E0C0_9GAMM)

HSP 1 Score: 92.0 bits (227), Expect = 7.580e-21
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 0
Query:    8 SSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNSGNS-VCDEANALG 100
            +  G+ +SEA QI+YN W +   H + + + LKNAVEL+P LV+ FDFALNE C+ + EC  Y   F  +GK VF  EY S NS +C +A+A G
Sbjct:  118 NGNGLGLSEANQIDYNRWLSQQAHEHNLAIALKNAVELIPALVDDFDFALNESCYAYKECEAYR-LFRQQGKAVFIAEYRSYNSNMCSKASASG 210          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: A0A654BBT4_9PSED (Glyco_hydro_114 domain-containing protein n=4 Tax=Pseudomonas TaxID=286 RepID=A0A654BBT4_9PSED)

HSP 1 Score: 92.0 bits (227), Expect = 1.250e-20
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 0
Query:    8 SSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNSGNS-VCDEANALG 100
            +  G+ +SEA QI+YN W +   H + + + LKNAVEL+P LV+ FDFALNE C+ + EC  Y   F  +GK VF  EY S NS +C +A+A G
Sbjct:  144 NGNGLGLSEANQIDYNRWLSQQAHEHNLAIALKNAVELIPALVDDFDFALNESCYAYKECEAYR-LFRQQGKAVFIAEYRSYNSNMCSKASASG 236          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: A0A4P9WWK1_9FUNG (Alpha-galactosidase (Fragment) n=2 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9WWK1_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 2.420e-20
Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 0
Query:    8 SSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNSGNS-----VCDEANALGL 101
            + +G  ++ A+Q+EYN + +D  H  G+GVGLKN+V  +  LV+ FDFA+NE+C E+NEC  Y   F++  KPVFN+EY   +S     VC +A  LG+
Sbjct:  137 NKSGFDLTAADQLEYNKFLSDTAHGLGLGVGLKNSVAQIADLVDSFDFAINEQCFEYNECGDY-SKFISAKKPVFNIEYKQSDSEFSSQVCPKAMELGI 234          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: N6VZR9_9GAMM (Polysaccharide hydrolase n=2 Tax=Marinobacter TaxID=2742 RepID=N6VZR9_9GAMM)

HSP 1 Score: 90.5 bits (223), Expect = 1.430e-19
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    4 YIEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEW-NECVVYEDTFLAEGKPVFNVEY 86
            Y+    T   +S A+Q+ YN+W A   H  G+ VGLKN ++ +  L   FDFA+NE+C+ + NECV+YEDTFLA GK VFN EY
Sbjct:  197 YLNDDETRGLISAADQLAYNTWLAGAAHDRGLSVGLKNDLDQLDALAEHFDFAVNEQCYAYGNECVLYEDTFLAAGKAVFNQEY 280          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: A0A150VRU7_9ACTN (Glyco_hydro_114 domain-containing protein n=5 Tax=Streptomyces TaxID=1883 RepID=A0A150VRU7_9ACTN)

HSP 1 Score: 90.1 bits (222), Expect = 1.990e-19
Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    7 GSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYN-SGNSVCDEANALGL 101
            G+ TG  ++  +Q+ YN   ADI HA G+ VGLKN +  +P LV+ FDFA+NEEC ++ EC + E  F+A GK VF+VEY  S ++ C E+ +L L
Sbjct:  217 GNDTGFPLTADDQLRYNRMIADIAHARGLAVGLKNDLAQIPFLVDHFDFAVNEECAQFGECALLEP-FVAAGKAVFHVEYEESPSAFCPESRSLRL 311          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: UPI0004C18934 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Streptomyces bikiniensis TaxID=1896 RepID=UPI0004C18934)

HSP 1 Score: 90.1 bits (222), Expect = 2.090e-19
Identity = 45/96 (46.88%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    7 GSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYN-SGNSVCDEANALGL 101
            G+ TG  ++  +Q+ YN   ADI HA G+ VGLKN +  +P+LV+ FDFA+NEEC +++EC + E  F+A GK VF+VEY  S ++ C E+ +L L
Sbjct:  221 GNDTGFPLTADDQLRYNRMIADIAHARGLAVGLKNDLHQIPLLVDHFDFAVNEECAQFDECGLLEP-FVAAGKAVFHVEYEESPSAFCAESRSLRL 315          
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Match: A0A0Q4TN22_9PSED (Glyco_hydro_114 domain-containing protein n=34 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0Q4TN22_9PSED)

HSP 1 Score: 88.2 bits (217), Expect = 3.470e-19
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 0
Query:    8 SSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNSGN-SVCDEANALGL 101
            +  G+S++EAEQI++N W A   H+  + +GLKNAVEL+P L + FDFA+NE C+ +NEC  Y     ++GKP+F  EY + N S+C  A   G 
Sbjct:  140 NDNGLSLTEAEQIDFNRWLASEAHSRDLSIGLKNAVELLPELGDYFDFAINESCYRYNECDGYSH-MRSQGKPIFIAEYRTLNTSLCSRAANSGF 233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14420.3400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ77_9PHAE5.300e-6195.05Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
UPI001F4E80895.760e-2449.47endo alpha-1,4 polygalactosaminidase n=1 Tax=Pseud... [more]
A0A1H7R5T2_9GAMM2.270e-2249.49Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
A0A1G3E0C0_9GAMM7.580e-2147.87Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
A0A654BBT4_9PSED1.250e-2047.87Glyco_hydro_114 domain-containing protein n=4 Tax=... [more]
A0A4P9WWK1_9FUNG2.420e-2044.44Alpha-galactosidase (Fragment) n=2 Tax=Caulochytri... [more]
N6VZR9_9GAMM1.430e-1950.00Polysaccharide hydrolase n=2 Tax=Marinobacter TaxI... [more]
A0A150VRU7_9ACTN1.990e-1946.88Glyco_hydro_114 domain-containing protein n=5 Tax=... [more]
UPI0004C189342.090e-1946.88endo alpha-1,4 polygalactosaminidase n=1 Tax=Strep... [more]
A0A0Q4TN22_9PSED3.470e-1945.26Glyco_hydro_114 domain-containing protein n=34 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004352Glycoside-hydrolase family GH114, TIM-barrel domainPFAMPF03537Glyco_hydro_114coord: 9..99
e-value: 5.3E-28
score: 97.9
NoneNo IPR availablePANTHERPTHR35273FAMILY NOT NAMEDcoord: 10..92
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 14..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14420contigEcto-sp13_S_contig14420:458..1035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14420.3400.1mRNA_Ecto-sp13_S_contig14420.3400.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14420 440..1035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14420.3400.1 ID=prot_Ecto-sp13_S_contig14420.3400.1|Name=mRNA_Ecto-sp13_S_contig14420.3400.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp
MMVYIEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILV
NKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNSGNSVCDEANALG
L
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004352GH114_TIM-barrel
IPR017853Glycoside_hydrolase_SF