mRNA_Ecto-sp13_S_contig1442.3397.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1442.3397.1
Unique NamemRNA_Ecto-sp13_S_contig1442.3397.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: D7FPG9_ECTSI (BTB (POZ) domain containing 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG9_ECTSI)

HSP 1 Score: 882 bits (2280), Expect = 0.000e+0
Identity = 474/569 (83.30%), Postives = 491/569 (86.29%), Query Frame = 1 
Query:    1 MVDGDTCDVTFVVTSVASAPSSSEGLVPQPAGTPERARPRTETLEQDSHRGDNCSDKNVSGAGIADSDTAGSCENRERQRGEGQEAWAGGGRGATGGGELETDREGAEKLTQGTTGVGTAVVTTTGSVSSTKLSTCSPVHGTSGSISSSLGITSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLMARPRGKKLAWDASSLAAGAWTADDNRTG--------ELTTSVGDWVGVYGNRVMRSGFHRWSVRANKIGRTEKWSAWAAIVGIARPHSQNPSRPYLPVTGFIAGTGSSKLGGNTAVDEYSSTSITDGDVVTVVYDADGGIVTFFVNGTSLGQAYSGLSGPNVAAIAVNAAGAQWECVDC 1683
            MVDGDTCDVTFVVTSVASAPSSSEGL+PQPAGTPERARPRTETLEQ SHRGDNCS KNVSGAGIADSDTAGSCENRER RGEGQEA AGG  G T GGELE+DREGA+KLTQGTT VGTA VTT+GSVSSTKLS+CSP H TSG+ SSSLG TSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELR QQVL+LVREGELQV+EAELF AVQAWVSRDTAERRRHVDE            LSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCL ARPRGK+LAWDASSLAAGAWTADDNRTG        E T S     G  G     S            G +   +A++   G       + +RPYLPVTGFIAGTGSSKLGGNTAVDEYSSTSITDGDVVTV+YDADGG+VTFFVNGTSLGQAYSGLSGPNVAAIAVNAAGAQWECVDC
Sbjct:    1 MVDGDTCDVTFVVTSVASAPSSSEGLIPQPAGTPERARPRTETLEQGSHRGDNCSGKNVSGAGIADSDTAGSCENRERHRGEGQEALAGGAGGXTXGGELESDREGADKLTQGTTDVGTAAVTTSGSVSSTKLSSCSPAHDTSGNTSSSLGTTSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRCQQVLSLVREGELQVNEAELFKAVQAWVSRDTAERRRHVDE------------LSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLTARPRGKRLAWDASSLAAGAWTADDNRTGLGFIGGPSERTRSAEPRSGALGQPSSESPDRIRRALEVVAGHSTLRNAFSCSTGCP-----STARPYLPVTGFIAGTGSSKLGGNTAVDEYSSTSITDGDVVTVMYDADGGVVTFFVNGTSLGQAYSGLSGPNVAAIAVNAAGAQWECVDC 552
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A6H5L8F4_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8F4_9PHAE)

HSP 1 Score: 745 bits (1924), Expect = 5.100e-265
Identity = 391/441 (88.66%), Postives = 397/441 (90.02%), Query Frame = 1 
Query:    1 MVDGDTCDVTFVVTSVASAPSSSEGLVPQPAGTPERARPRTETLEQDSHRGDNCSDKNVSGAGIADSDTAGSCENRERQRGEGQEAWAGGGRGATGGGELETDREGAEKLTQGTTGVGTAVVTTTGSVSSTKLSTCSPVHGTSGSISSSLGITSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAE----------------------LSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLMARPRGKKLAWDASSLAAGAWTADDNRTGE 1257
            MVD DTCDVTFVVTSVASA SSSEGL+PQPAGTPERARPRTETLEQ SHRGDNCSDKNVSGAGIAD+  AGSCENRERQRGEGQEAW GGGRGATGGGELET REGAEKL QGTTGVGT  V T  SVSSTKLSTCSP H TSGS SSSLG TSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDEC+NCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFL+LR QQVL+LVREGELQVDEAELF AVQAWVSRDTAERRRHVDEASC RHAQW AE                      LSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLMARPRGK+LAWDASSLAAGAWT DDNRTGE
Sbjct:   27 MVDDDTCDVTFVVTSVASAQSSSEGLLPQPAGTPERARPRTETLEQGSHRGDNCSDKNVSGAGIADNYRAGSCENRERQRGEGQEAWDGGGRGATGGGELETAREGAEKLNQGTTGVGTTAVATXSSVSSTKLSTCSPAHDTSGSTSSSLGTTSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECLNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLDLRSQQVLSLVREGELQVDEAELFKAVQAWVSRDTAERRRHVDEASCVRHAQWFAEVLCSAVLQKCARGRVVPPSQHRLSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLMARPRGKRLAWDASSLAAGAWTTDDNRTGE 467
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A6H5KSB5_9PHAE (SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSB5_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.270e-36
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 1 
Query: 1465 SSKLGGNTAVDEYSSTSITDGDVVTVVYDADGGIVTFFVNGTSLGQAYSGLSGPNVAAIAVNAAGAQWECVDC 1683
            SSKLGGNTAVD YSSTSITDGDVVTVVYDADGG++TFFVNGTSLGQAYSGLSGPNVAAIAVNAAGAQWECVDC
Sbjct:    4 SSKLGGNTAVDTYSSTSITDGDVVTVVYDADGGVLTFFVNGTSLGQAYSGLSGPNVAAIAVNAAGAQWECVDC 76
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A444UQ67_ACIRT (BTB/POZ domain-containing protein 9 n=2 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UQ67_ACIRT)

HSP 1 Score: 152 bits (383), Expect = 5.930e-35
Identity = 86/233 (36.91%), Postives = 129/233 (55.36%), Query Frame = 1 
Query:  454 ITSREFRCHRVLFASCSAYFRALLYGGMSESETR-RVELRDVTPEGFEAIMRYVYTGKVSVDAAN---VMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHAD 1140
            +  + F  HRV+ A+   YFRALLYGGM ES+ +  + L D T E F  +++Y+YTG+VS+ +     ++D  SLAHR+G  +L  + +E L   +N  +VC + + A  Y   +L+  C   I  N P VL SE FL L    +LT+VR       E E+F A+  W   ++AE+   V  A                RLPLMSL E+++VVRP+ L++ DA+LDA+   ++
Sbjct:   81 VEKKRFPAHRVILAARCQYFRALLYGGMKESQPQAEIPLEDTTAEAFSMLLQYIYTGRVSLSSEREEVLLDFLSLAHRYGFEQLEDSTSEYLRTILNTHNVCLIFDVASLYSLRKLSTTCCTYIDRNAPDVLASEGFLSLSKLALLTVVRRDSFAAPEKEIFQALCRWCRHNSAEKPEEVMGA---------------VRLPLMSLAEMLNVVRPSGLLSPDALLDAIKTRSE 298
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A4U1EJ30_MONMO (BTB domain-containing protein (Fragment) n=2 Tax=Artiodactyla TaxID=91561 RepID=A0A4U1EJ30_MONMO)

HSP 1 Score: 141 bits (356), Expect = 4.380e-34
Identity = 80/233 (34.33%), Postives = 124/233 (53.22%), Query Frame = 1 
Query:  454 ITSREFRCHRVLFASCSAYFRALLYGGMSESETR-RVELRDVTPEGFEAIMRYVYTGKVSVDAAN---VMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHAD 1140
            +  + F  HRV+ A+   YFRALLYGGM ES+    + L+D T E F  +++Y+YTG+ ++       ++D  SLAH++G  EL  + +E L   +N  +VC   + A  Y   +L + C   +  N   VL SE FL L    +L +V        E ++F+A+  W   ++ E                 AE+ +  RLPLMSL EL++VVRP+ L++ DAILDA+   ++
Sbjct:   51 VEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTSMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKENH---------------AEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSE 268
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A6P7XEI7_9AMPH (BTB/POZ domain-containing protein 9 n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7XEI7_9AMPH)

HSP 1 Score: 147 bits (371), Expect = 1.160e-33
Identity = 84/233 (36.05%), Postives = 124/233 (53.22%), Query Frame = 1 
Query:  454 ITSREFRCHRVLFASCSAYFRALLYGGMSESETR-RVELRDVTPEGFEAIMRYVYTGKVSVDAAN---VMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHAD 1140
            +  R F  HRV+ A+   YFRALLYGGM ES+ +  + L D TPE F  +++Y+YTG+V++       ++D  SLAH++G  EL  + +E L   +N  +VC + + A  Y   +L   C   I  N   VL SE FL L    +L +V        E ++F A+ +W   +  E    V +A                RLPLMSL EL++VVRP+ L++ DAILDA+   ++
Sbjct:   42 VDKRRFPAHRVILAARCQYFRALLYGGMRESQPKAEIPLEDTTPEAFTMLLKYIYTGRVTLRDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNVQNVCMIYDVASLYSLPKLTCTCCMFIDRNAQEVLSSEGFLTLSKAALLNIVTRDSFAAPEKDIFQALTSWCKNNGNENHTEVMQA---------------VRLPLMSLTELLNVVRPSGLLSPDAILDAIKIRSE 259
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A6J3FUZ0_SAPAP (BTB/POZ domain-containing protein 9-like isoform X1 n=2 Tax=Sapajus apella TaxID=9515 RepID=A0A6J3FUZ0_SAPAP)

HSP 1 Score: 141 bits (355), Expect = 1.460e-33
Identity = 80/233 (34.33%), Postives = 123/233 (52.79%), Query Frame = 1 
Query:  454 ITSREFRCHRVLFASCSAYFRALLYGGMSESETR-RVELRDVTPEGFEAIMRYVYTGKVSVDAAN---VMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHAD 1140
            +  + F  HRV+ A+   YFRALLYGGM ES+    + L+D T E F  +++Y+YTG+ ++       ++D  SLAH++G  EL  + +E L   +N  +VC   + A  Y   +L   C   +  N   VL SE FL L    +L +V        E ++F+A+  W   ++ E                 AE+ +  RLPLMSL EL++VVRP+ L++ DAILDA+   ++
Sbjct:   59 VEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKENH---------------AEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSE 276
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A6P8PVN7_GEOSA (BTB/POZ domain-containing protein 9 n=6 Tax=Tetrapoda TaxID=32523 RepID=A0A6P8PVN7_GEOSA)

HSP 1 Score: 147 bits (370), Expect = 1.490e-33
Identity = 84/233 (36.05%), Postives = 123/233 (52.79%), Query Frame = 1 
Query:  454 ITSREFRCHRVLFASCSAYFRALLYGGMSESETR-RVELRDVTPEGFEAIMRYVYTGKVSVDAAN---VMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHAD 1140
            +  R F  HRV+ A+   YFRALLYGGM ES+ +  + L D TPE F  +++Y+YTG+V++       ++D  SLAH++G  EL  + +E L   +N  +VC + + A  Y   +L   C   I  N   VL SE FL L    +L +V        E ++F A+ +W   +  E    V  A                RLPLMSL EL++VVRP+ L++ DAILDA+   ++
Sbjct:   42 VDKRRFPAHRVILAARCQYFRALLYGGMRESQPKAEIPLEDTTPEAFTMLLKYIYTGRVTLRDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNVQNVCMIYDVASLYSLPKLTCTCCMFIDRNAQEVLSSEGFLTLSKAALLNIVMRDSFAAPEKDIFQALTSWCKSNGKENHTEVMHA---------------IRLPLMSLTELLNVVRPSGLLSPDAILDAIKIRSE 259
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BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A1A6G1D2_NEOLE (BTB domain-containing protein n=1 Tax=Neotoma lepida TaxID=56216 RepID=A0A1A6G1D2_NEOLE)

HSP 1 Score: 141 bits (356), Expect = 2.000e-33
Identity = 81/233 (34.76%), Postives = 122/233 (52.36%), Query Frame = 1 
Query:  454 ITSREFRCHRVLFASCSAYFRALLYGGMSESETR-RVELRDVTPEGFEAIMRYVYTGKVSVDAAN---VMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHAD 1140
            +  + F  HRV+ A+   YFRALLYGGM ES+    + L+D T E F  ++RY+YTG+ ++       ++D  SLAH++G  EL  + +E L   +N  +VC   + A  Y   +L   C   +  N   VL SE FL L    +L +V        E ++F+A+  W   +  E                 AE+ +  RLPLMSL EL++VVRP+ L++ DAILDA+   ++
Sbjct:   42 VEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLRYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDRNAQEVLASEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNAKENH---------------AEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSE 259
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Match: A0A444U0N6_ACIRT (BTB/POZ domain-containing protein 9 n=5 Tax=Acipenseroidei TaxID=186622 RepID=A0A444U0N6_ACIRT)

HSP 1 Score: 146 bits (369), Expect = 2.140e-33
Identity = 83/233 (35.62%), Postives = 127/233 (54.51%), Query Frame = 1 
Query:  454 ITSREFRCHRVLFASCSAYFRALLYGGMSESETR-RVELRDVTPEGFEAIMRYVYTGKVSVDAAN---VMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGELQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHAD 1140
            +  + F  HRV+ A+   YFRALLYGGM ES+ +  + L D T E F  +++Y+YTG+VS+ +     ++D  SLAHR+G  +L  + +E L   +N  +VC + + A  Y   +L+  C   I  NT  VL SE FL +    +L +VR       E E+F A+  W   ++ E    V  A                RLPLMSL+E+++VVRP+ L++ DA+LDA+   ++
Sbjct:   42 VEKKRFPTHRVILAARCHYFRALLYGGMKESQPQAEIPLEDTTAEAFSMLLQYIYTGRVSMSSEREEVLLDFLSLAHRYGFEQLEDSTSEYLRTILNTHNVCLIFDVASLYSLRKLSTSCCTYIDRNTADVLASEGFLSMSKPALLIMVRRDSFAAPEKEIFQALCCWCRHNSTELPEEVMGA---------------VRLPLMSLEEMLNVVRPSGLLSPDALLDAIKIRSE 259
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1442.3397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPG9_ECTSI0.000e+083.30BTB (POZ) domain containing 9 n=1 Tax=Ectocarpus s... [more]
A0A6H5L8F4_9PHAE5.100e-26588.66BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KSB5_9PHAE2.270e-3695.89SPRY domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A444UQ67_ACIRT5.930e-3536.91BTB/POZ domain-containing protein 9 n=2 Tax=Acipen... [more]
A0A4U1EJ30_MONMO4.380e-3434.33BTB domain-containing protein (Fragment) n=2 Tax=A... [more]
A0A6P7XEI7_9AMPH1.160e-3336.05BTB/POZ domain-containing protein 9 n=2 Tax=Gymnop... [more]
A0A6J3FUZ0_SAPAP1.460e-3334.33BTB/POZ domain-containing protein 9-like isoform X... [more]
A0A6P8PVN7_GEOSA1.490e-3336.05BTB/POZ domain-containing protein 9 n=6 Tax=Tetrap... [more]
A0A1A6G1D2_NEOLE2.000e-3334.76BTB domain-containing protein n=1 Tax=Neotoma lepi... [more]
A0A444U0N6_ACIRT2.140e-3335.62BTB/POZ domain-containing protein 9 n=5 Tax=Acipen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1442contigEcto-sp13_S_contig1442:2750..8794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score882.1
Seed ortholog evalue1.4e-253
Seed eggNOG ortholog2880.D7FPG9
Model size2062
KEGG koko:K10480
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.circadian sleep/wake cycle, non-REM sleep
EggNOG OGsKOG4350@1,KOG4350@2759
Ec32 ortholog descriptionBTB/POZ-like
Ec32 orthologEc-14_004900.2
Cds size1686
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1442.3397.1prot_Ecto-sp13_S_contig1442.3397.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1442 3126..8794 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462769.5794127-UTR-Ecto-sp13_S_contig1442:2749..31251681462769.5794127-UTR-Ecto-sp13_S_contig1442:2749..3125Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1442 2750..3125 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462769.590185-CDS-Ecto-sp13_S_contig1442:3125..33911681462769.590185-CDS-Ecto-sp13_S_contig1442:3125..3391Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 3126..3391 -
1681462769.6004503-CDS-Ecto-sp13_S_contig1442:4109..42191681462769.6004503-CDS-Ecto-sp13_S_contig1442:4109..4219Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 4110..4219 -
1681462769.610939-CDS-Ecto-sp13_S_contig1442:4781..48331681462769.610939-CDS-Ecto-sp13_S_contig1442:4781..4833Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 4782..4833 -
1681462769.6255305-CDS-Ecto-sp13_S_contig1442:5251..53391681462769.6255305-CDS-Ecto-sp13_S_contig1442:5251..5339Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 5252..5339 -
1681462769.6337824-CDS-Ecto-sp13_S_contig1442:6044..61911681462769.6337824-CDS-Ecto-sp13_S_contig1442:6044..6191Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 6045..6191 -
1681462769.641571-CDS-Ecto-sp13_S_contig1442:6776..69691681462769.641571-CDS-Ecto-sp13_S_contig1442:6776..6969Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 6777..6969 -
1681462769.6495097-CDS-Ecto-sp13_S_contig1442:7690..78801681462769.6495097-CDS-Ecto-sp13_S_contig1442:7690..7880Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 7691..7880 -
1681462769.6577358-CDS-Ecto-sp13_S_contig1442:8154..87941681462769.6577358-CDS-Ecto-sp13_S_contig1442:8154..8794Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1442 8155..8794 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1442.3397.1

>prot_Ecto-sp13_S_contig1442.3397.1 ID=prot_Ecto-sp13_S_contig1442.3397.1|Name=mRNA_Ecto-sp13_S_contig1442.3397.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
MVDGDTCDVTFVVTSVASAPSSSEGLVPQPAGTPERARPRTETLEQDSHR
GDNCSDKNVSGAGIADSDTAGSCENRERQRGEGQEAWAGGGRGATGGGEL
ETDREGAEKLTQGTTGVGTAVVTTTGSVSSTKLSTCSPVHGTSGSISSSL
GITSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAI
MRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCR
VLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRWQQVLTLVREGE
LQVDEAELFMAVQAWVSRDTAERRRHVDEASCARHAQWSAELSRHFRLPL
MSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLMARPRGKKLAW
DASSLAAGAWTADDNRTGELTTSVGDWVGVYGNRVMRSGFHRWSVRANKI
GRTEKWSAWAAIVGIARPHSQNPSRPYLPVTGFIAGTGSSKLGGNTAVDE
YSSTSITDGDVVTVVYDADGGIVTFFVNGTSLGQAYSGLSGPNVAAIAVN
AAGAQWECVDC*
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mRNA from alignment at Ecto-sp13_S_contig1442:2750..8794-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1442.3397.1 ID=mRNA_Ecto-sp13_S_contig1442.3397.1|Name=mRNA_Ecto-sp13_S_contig1442.3397.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6045bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1442:2750..8794- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGGATGGTGATACGTGTGACGTAACGTTTGTCGTGACGTCCGTGGC
GTCGGCTCCGTCCAGCTCTGAAGGACTTGTTCCACAACCGGCAGGGACAC
CAGAGCGGGCAAGACCAAGGACTGAAACGCTAGAACAAGACTCGCATAGA
GGCGACAACTGCAGCGACAAGAATGTCTCGGGTGCTGGAATCGCCGATAG
TGACACAGCTGGGAGCTGTGAAAATAGGGAGAGGCAGCGGGGCGAGGGCC
AAGAGGCCTGGGCCGGAGGAGGAAGGGGGGCAACAGGCGGGGGAGAACTG
GAAACCGACAGGGAGGGAGCGGAGAAGCTGACCCAAGGAACAACGGGCGT
CGGCACAGCAGTGGTAACTACCACCGGTTCTGTGTCATCCACGAAGTTGA
GCACCTGCTCTCCTGTTCACGGTACCTCAGGTAGCATCAGCAGCAGCCTG
GGCATTACCAGCAGAGAGTTCAGGTGCCATCGTGTTTTGTTCGCCTCGTG
CTCGGCGTACTTCCGCGCTCTGCTGTACGGCGGTATGAGCGAATCGGAGA
CGAGGAGGGTGGAGCTGAGAGACGTCACGCCGGAAGGGTTTGAGGCCATA
ATGAGATACGTCTACACCGGAAAAGTTAGCGTGGATGCGGGTAAGTGAGA
AAGAGACTACAATAACGGCCGTGGGGAAAATGGTAGGACAGCCTAATTGC
AGCCGTTTCTTACAGCAAGTATGTAGTTGTCCAACAGCAAGCACGAGAAG
GGTTTCATGTTATCAGAGCCTCTCTCAGTCGGAAGAGGAGACGTATATAT
TCGTGTGCCTGCACAAATATGAGCTCGCCCTCACCACCGTCGTGAAGTGA
GACACCCACCGACTAGCCGAACCACACCACGCCCCGACCGATTTGACCAC
CCGCACGCGTTCAGCCAACGTGATGGACATTTTTTCGCTGGCGCACCGGT
TCGGGATGGGCGAACTCCTGAAAGCTTGCGCGGAAGTCTTGGACGAGTGC
ATGAACTGCGACGATGTTTGCCGGGTGCTGGAGGCGGCGGAGTACTACGG
ACACGACGAACTTGCGGCCAAGTGCTGGGATCTCATCAAGGACAACACGC
CCAGGTGAACCAACAATTCCATACAGCCCGGGGCCCTCTTACAAGTGCGT
GTCATTTTAGTGCGGGTGCCGATATTTTGTGGGTGAAGTTGGCTGGCACA
GATGGAATCTTCAAAATGGTTAATTCGTTGAAAACTGTCGGTGCCGGCTA
AAATGCGGGTGAAAGCGCTTGGCACTTTCCGCACTTTAGAGGCCCCCCGA
CTGTATGGAGATGCGCACCATGTGTGTGTTCACCTCTAGGGTTTGTGGGG
CCGTCGTCTGTCGCCTTCGGTCAGTGTAAACGAGTGTCACGGGATTGAGC
AGACGCTTTGGCGTGTGGCGGTGACTTGTGGGAGCATCGTAAAGAGAAGG
TAGCGTGCTGGGCAGATTATCTAGGAAATGGCTATCTGCATACCACGGAC
GAAATGAGAACACGGTAACAACAACAAATGACAAAACAACGCGAATGATC
CTCCTCTGCGTGACCCCTGGTGTGAACCCTGCTAGATTGTGTAGTTTTGG
CCACCCGTTTTTGACACATGTGCCCTTTTTTGGGACGATTTTTTCGCGCT
GCAGCGTACTCAGCCTCTCCACGCCCCCGCCCCCGCCCCCGCCCCCGCCC
GCGCCCCCGCTTCCCTCTCCCTGCACTTCCTTGTCCTCTCCGCGTTTCCC
TCCTTTCTCCATGTATCTTCCTTCACCCCCCCTCCCCACTCGGGTGTCTC
TTCACGACGTGACATGTGGGATCAGGGTGTTGAAGAGCGAGAGCTTCTTG
GAGCTCCGGTGGCAACAGGTGCTGACCCTCGTGAGGGAGGGAGAGCTGCA
GGTGGATGAGGCCGAGCTCTTCATGGCAGTGCAGGCCTGGGTATCGAGAG
ATACGGCAGAGAGGCGACGTCACGTTGATGAGGCGAGTTGTGCGCGACAT
GCGCAGTGGTCTGCAGAGGTTCTGTGCTGTCCAGTGCTGCAAAAGTGTGC
TCGCGGCAGAGAGAGTAGTTCCCCCCTCGCAGCACAGGGTGTGCCTGCTG
TCGCACCTCCCTCTGTACAGCAGCAAGCTCTGTCGCCGCCCGCAAAGCTG
CTGCGGTGTACGGGGGGAGGGGGCGCTGCTGGCGTGCTACGGGGGTCGTG
ATGTCCGGTACGGGAGGTACTGCTTGAGTGTACAGTGTTCTTCGCTCTTG
TCTATTGCAAAGCTATACAGATGCCCTCCACCAGCTTAATAAGAGCAGTG
ACCCCCTCTTTCTGCTGCTCCTCCTGACGCTGCGTGCTAGGTTCGTTGTC
TAGCATGTTGCTCGTTTCTTGGATCAGATGCGTATGACATAAACATCGAA
GAGCTTGATACGCTCTTTGCTTGAAGTTCCCCCCCCGCTCTCACCTTCGC
CATGAACCTACCCGCCTCTTCACTAAGCGGAATACACACGTCTTTGTGTC
GAGGCAGCGCATTCCCCCCGTTTACACACACCGTCCCCCAATCAACTGAG
TACCCCCGCCATTCCTTCCGCACATTTTTTGTTTTTTTTTCTCGTGGCCG
CAGCTGTCTCGCCACTTTCGCCTCCCGCTTATGTCCCTGAAAGAGCTCAT
GTCGGTCGTCCGGCCGACAAACCTGATCGCGGCAGACGCGATCCTCGATG
CCGTCACGTACCACGCCGATCCGACAAGGTGGACGGGCGATTGCTTGATG
GTAAGAGAGAGAAAGAGAGAGAGACACACACACAGAGACAGAGAGAGAGT
CACACACAGAGACAGAGAGGGAGAAAGACAAGACACCACACGGGCGCACA
CCCTGTGCCATCATCCCGGTGCTGGGTTTTATCCACCCTATGGTCGTGTT
TTGCTAAGGAGGAACTCCGTTCGGCGGTCCCACGAGAGAGTCTCTTACCT
CCTCTGTGGTATTTACATTTTTTCAATACTTCAAATATCAGCGCTCACGC
ACTCAGCATTTCTACAGGGTAGGAGCCCCAGTCCGTAGTCACTCACATCA
CACAGAAGGGTTATCGGCTCCTGAGGCCCCCTGTCTATGAGTTAGTTGTG
TGCCTTGTCGTACTTGTACAGCAGTAGATGGGACGTATTTGAGATGCACG
TACAGGCATGATGTTACCAGTAGTTTAAGATAACCAGCTTTGTTTGGGCT
CCTCTCCCGTCTTTCCCGTCTCCCGGAAAATTCTGCCGAAATCGTGATAA
TATTTTCGGTCTGGTTCGTCGAAATTTGCTCGGATTAACGAACAGTGTCC
TTTGGTGGGGTCAGCGGTTTCCCCCGACGCCTTTCTCCTCTTGAGTGTCC
CCTCTCACCATCTCTCCAGACTGCGGTTGTTCGCCGTCCCTCCCTCACAA
CACGCGCCATGATGTCGTTACGCCTCGGGTGGCCGTGCAACAACAAAAAA
AAAAGGCGCGGCCACGCGGGAAGAAGCTTGCCTGGGACGCGTCGAGCCTT
GCTGCGGGAGCATGGACGGCAGACGACAACCGAACAGGCGAGCGTCGACA
AGGCTAGCTATACCGTCCTGTTGATCTTCTGTGTGTCTGACTCTGGTCAC
GCAAACAAGGTGTCACGACGACCCGGGACGCAAGTTCTTGTTCTCACGCC
TTTTCTTGCTCTGTTGCAAGCAAGTCTCCGTCGGTGGTATCATCATGCGT
TGATTTCGGCGTAGGTCGGGATTTTATCGATCTGTGTGGCGCCTCTCTGC
CTCACGGCATCACATCAGCGACACCCGTATGTTGTAGCTACCCGTTCCTC
ACGCTCTCGGCGATCGACAACGGAATGACTCCGGTAACACAAACAGCCAT
ACGAAGACTCCGCCGTGGCTGTTCTTATCACACCCAACAGCGTCACACGC
ACACGTTTTCCCTTCGCGCGGTCTGATTCGAGCCGTCTCGTTTGATGTTA
TCGCCGCGCAGTCACGACGTCCGTGGGAGACTGGGTCGGAGTTTACGGAA
ATCGCGTCATGAGGTGGGTTCAGGCGCGGTCTGGGTGGATGCGTTACGTG
GACTTTTGAGGGTTCCGAAGTGTTGGTGATGGTGGTGGTGGTGGTGATCC
TGGCGTTGGTAATTTTCGTGTCGATGTCACCGATCACGGTGTGTGTGTGC
ACGCCGTGCGTGTCGTCGTTTTGAGCTAAATACGGTTGAAATCATTTTCA
CGTTCAGCGAAAGAAATAGGGCCCAAAAGTCCACCCGCCGTCTTGAGCGC
CGGGGGGTCCTCTTAGAGGGGAAACATATACCTACACCTCTTGTGGTGGT
GTGGAAACGCATCATTGGCGTCGCGGCCGGGAAGCATGCATCAAAGGAGG
GTGATTGTGAAGTGCGAACCAAAGACTCTAAAATGCCGGCAGACGTCCCA
CTGTGTTTTTCTCGGACAGGCCACGGAAACACTGGGAGCGTCAATAATCC
GCATGCATGCACACCCGTGCCGGAAGGCAGACGTGATGTTTTGCGCGGGC
GTGGCGCCTCAGGCTTTGCAGGGAAGAGTCAGTTCACGCAGATGTTTTCC
GCCCACACGACAATAAAACCAACAGGTCTGGGTTTCATCGGTGGTCCGTC
CGAGCGAACAAGATCGGCCGAACCGAGAAGTGGAGTGCTTGGGCAGCCAT
CGTCGGAATCGCCCGACCGCATTCGCAAAACCCTTGTGAGTTGTATCTCT
ACGTTCGTAGATACGTGTACTTGTTGCTTTCTTGTTAAGGACGTCTCAGC
GAGTCGTCGTCGGACACTCAACTTCAACAAACGCCTCTTCGTATTCTGCG
GGGTGTCCCTACAGGTGTGTGTGTCTGTGTGTGTGAGTGTACTGCTGTGC
GTCTCAAAGAAGCCGAAATCAAACCAGAAGACTACTCAGACGTTGTCTAG
TCTTATGGTTTGATTTCTGCTCAGCTAAGGCGAGTCATCCTCCTCGGAAG
TGAAAAGGGCCGGGGCTCACGAACCCCAGGACCACCTTTAAAAGAAGCCG
AAAACAAACCATTAGACTAGTCAGCGCTGACTATAGTAGTCCAATGGTTT
GATTTTGGCTTCTTCAGTCTTTTACCAGTTTTGGCACGTTGGAGAATTCC
TACACCATTTTCTCTCAAGGGTTGTGATTGACAGGAACTCATTGATTTTG
CGTTGACTTTTTCGAACAGTAGCTCTGGATGCTGCCCTCGAGGTAAAACG
AAGAAACTCTCTGAAATGTTTCGATATACAGTAGTCACACACGCACGCAC
GCACGCCAAATCTCTCTTTTATTACTCACTCGCCCTCCAACACCAGCAAG
CACGTTCTGCATTTTTTTCTCCCCCTGTAAGACTCGGCATACTTCCACTG
ACCAGCCGATCGATGCCAGCACCCCCCCCCCCCCCCCCCTACCCCTCCAA
CAGCCCGACCGTACCTGCCCGTTACCGGCTTCATCGCCGGCACCGGCAGC
AGCAAGCTCGGCGGCAACACGGCCGTGGACGAGTACTCCTCGACCTCGAT
CACCGACGGCGACGTGGTGACGGTGGTGTACGACGCGGACGGGGGCATCG
TGACGTTCTTCGTCAACGGGACTAGCCTCGGGCAGGCCTACTCCGGTCTG
TCGGGCCCCAACGTGGCCGCGATCGCCGTCAACGCGGCGGGCGCCCAGTG
GGAGTGCGTCGACTGCTAGCAGGGATGGGGGAGGCTTAACGGCAGACGAA
GAAGAGGGATTCCTCTCCTACTGCCACAGCTGCTGCTACTGCTGCACTGA
AAAGCGAGAATGTGATGCTGATTCCGTTGGATTGATGGTCTCCTAGGCGT
TTGGTGTGTGAAGTGTCTCTGGCGTGAGTTTGCCCAGAGCAGGCTTTACA
AGCGCCGTTTCTGGTGTCTGTAGGCTACATCGGGCTCGTCGCTGCTACAG
TGGAACGCAAAACTGCTGTGCGTTTGTTCGTGCGAACTGCTGGACATGTA
CGGTCATGGTAAATAACCGTGTTCGTGTTGGACCACGATGTACATCACCT
TCCAAGGAGGCATTTTCCGCTGAAGCGATCGCCCTGGGGATTGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1442:2750..8794-

>mRNA_Ecto-sp13_S_contig1442.3397.1 ID=mRNA_Ecto-sp13_S_contig1442.3397.1|Name=mRNA_Ecto-sp13_S_contig1442.3397.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1686bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1442:2750..8794- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGGATGGTGATACGTGTGACGTAACGTTTGTCGTGACGTCCGTGGC
GTCGGCTCCGTCCAGCTCTGAAGGACTTGTTCCACAACCGGCAGGGACAC
CAGAGCGGGCAAGACCAAGGACTGAAACGCTAGAACAAGACTCGCATAGA
GGCGACAACTGCAGCGACAAGAATGTCTCGGGTGCTGGAATCGCCGATAG
TGACACAGCTGGGAGCTGTGAAAATAGGGAGAGGCAGCGGGGCGAGGGCC
AAGAGGCCTGGGCCGGAGGAGGAAGGGGGGCAACAGGCGGGGGAGAACTG
GAAACCGACAGGGAGGGAGCGGAGAAGCTGACCCAAGGAACAACGGGCGT
CGGCACAGCAGTGGTAACTACCACCGGTTCTGTGTCATCCACGAAGTTGA
GCACCTGCTCTCCTGTTCACGGTACCTCAGGTAGCATCAGCAGCAGCCTG
GGCATTACCAGCAGAGAGTTCAGGTGCCATCGTGTTTTGTTCGCCTCGTG
CTCGGCGTACTTCCGCGCTCTGCTGTACGGCGGTATGAGCGAATCGGAGA
CGAGGAGGGTGGAGCTGAGAGACGTCACGCCGGAAGGGTTTGAGGCCATA
ATGAGATACGTCTACACCGGAAAAGTTAGCGTGGATGCGGCCAACGTGAT
GGACATTTTTTCGCTGGCGCACCGGTTCGGGATGGGCGAACTCCTGAAAG
CTTGCGCGGAAGTCTTGGACGAGTGCATGAACTGCGACGATGTTTGCCGG
GTGCTGGAGGCGGCGGAGTACTACGGACACGACGAACTTGCGGCCAAGTG
CTGGGATCTCATCAAGGACAACACGCCCAGGGTGTTGAAGAGCGAGAGCT
TCTTGGAGCTCCGGTGGCAACAGGTGCTGACCCTCGTGAGGGAGGGAGAG
CTGCAGGTGGATGAGGCCGAGCTCTTCATGGCAGTGCAGGCCTGGGTATC
GAGAGATACGGCAGAGAGGCGACGTCACGTTGATGAGGCGAGTTGTGCGC
GACATGCGCAGTGGTCTGCAGAGCTGTCTCGCCACTTTCGCCTCCCGCTT
ATGTCCCTGAAAGAGCTCATGTCGGTCGTCCGGCCGACAAACCTGATCGC
GGCAGACGCGATCCTCGATGCCGTCACGTACCACGCCGATCCGACAAGGT
GGACGGGCGATTGCTTGATGGCGCGGCCACGCGGGAAGAAGCTTGCCTGG
GACGCGTCGAGCCTTGCTGCGGGAGCATGGACGGCAGACGACAACCGAAC
AGGCGAGCTCACGACGTCCGTGGGAGACTGGGTCGGAGTTTACGGAAATC
GCGTCATGAGGTCTGGGTTTCATCGGTGGTCCGTCCGAGCGAACAAGATC
GGCCGAACCGAGAAGTGGAGTGCTTGGGCAGCCATCGTCGGAATCGCCCG
ACCGCATTCGCAAAACCCTTCCCGACCGTACCTGCCCGTTACCGGCTTCA
TCGCCGGCACCGGCAGCAGCAAGCTCGGCGGCAACACGGCCGTGGACGAG
TACTCCTCGACCTCGATCACCGACGGCGACGTGGTGACGGTGGTGTACGA
CGCGGACGGGGGCATCGTGACGTTCTTCGTCAACGGGACTAGCCTCGGGC
AGGCCTACTCCGGTCTGTCGGGCCCCAACGTGGCCGCGATCGCCGTCAAC
GCGGCGGGCGCCCAGTGGGAGTGCGTCGACTGCTAG
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