mRNA_Ecto-sp13_S_contig14411.3392.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14411.3392.1
Unique NamemRNA_Ecto-sp13_S_contig14411.3392.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: D7G2B9_ECTSI (Similar to dermatan 4-sulfotransferase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B9_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 1.380e-176
Identity = 237/257 (92.22%), Postives = 244/257 (94.94%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATNKRERYFSKEALDAIKMVYGKDYSLFGEYFEEHSASSLQ 771
            ++KVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVR+DVRL GCKVNSHWRPQHCFCSIARFR+SYHVVPFANMS          TEAVNLVDHMRRPSPDRAELLREFIV+RFSSNQDAKAQGAT+KRERYFS+EALD IKMVYGKDYSLFGEYFEEHSAS LQ
Sbjct:   17 IAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLTGCKVNSHWRPQHCFCSIARFRESYHVVPFANMS----------TEAVNLVDHMRRPSPDRAELLREFIVQRFSSNQDAKAQGATSKRERYFSQEALDVIKMVYGKDYSLFGEYFEEHSASRLQ 263          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A6H5JC58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC58_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 9.900e-120
Identity = 163/169 (96.45%), Postives = 169/169 (100.00%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSAS 507
            ++KVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAA+NDEPRKVFRDFMLGV+KDVRLRGCKVNSHWRPQHCFCSIARFR+SYHVVPFANMSA+
Sbjct:  182 IAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAINDEPRKVFRDFMLGVQKDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSAN 350          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: D8LPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX9_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.200e-37
Identity = 84/262 (32.06%), Postives = 126/262 (48.09%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDW--DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQ----------NCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRG--CKV-NSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSN--QDAKAQGATNKRERYFSKEALDAIKMVYGKDYSLFG 735
            ++KVA AEW+++LRWM+GI DW  +   +H  GKNG+  L       I   +  D + +FVVVRDPA+RL+SAFLNKC+   +           NC Y   MP  FP  ++    T    R  +  EP   F  F  G+  +++  G  CKV N H++PQ CFC +     ++HV+PF NMSA  + F   + E + +  H        A + +  I K       Q  +  G +  R +  +    +  +    KD  + G
Sbjct:   76 IAKVASAEWKRSLRWMVGIEDWMGNHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQTLRDLVEREPEDTFYHFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPISPHKEATDGGTAGISKSSIGKDGPGGMAQGGRGTGVSGSRRQEIADFLTERFETARDKDVKVTG 337          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A6H5JKQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ4_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 4.940e-35
Identity = 87/265 (32.83%), Postives = 126/265 (47.55%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKC----LGGEWQNCPYTEFMP-----QRFPGVSKRDAATDTK---FRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQD--AKAQGATNKRERYFSKEALDAIKMVYGKDYSLFGEYFEEH 753
            + KVAC EW K  RW+ G  DW   P H   K+G+ +L          ++N   WLKF VVR+PA RLLS FL KC    +  E+ NCPY E  P     +RFP         DT    + A  +     +F  ++  + + V+   C  N HW PQ+C CS+      + +V +ANM           TEA +        S  R   ++EF+V R  +N +   K   A ++ +  ++ EAL A+   Y KDY LF +Y+ E+
Sbjct:  120 IQKVACTEWIKVFRWIDGHEDW-AEPRHQ--KHGLDVLEEMDVERGNQILNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYSNCPYLELWPDLFDRERFPDGVPTRPGVDTLAIVWEAFTSRGRDSMFAPYVEVITRRVKQDPCGQNKHWSPQYCHCSLDVTAPVFRIVGWANM-----------TEAASAAIVPFASSSARGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEAYTAEALQAVHEAYAKDYKLFSQYWVEN 370          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A812MLT8_9DINO (CHST8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MLT8_9DINO)

HSP 1 Score: 82.4 bits (202), Expect = 1.330e-14
Identity = 70/262 (26.72%), Postives = 110/262 (41.98%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNG-----IPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQN----------CPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKA--QGATNKRERY-FSKEALDAIKMVYGKDYSLF 732
            V K   + W+  LRW++G+ DW + P H++  NG     + L    +A  I++M+ D SW K  VVRDP DRL SA+L+K  GG   N           PY  F    FP                          DF+  V   +       N HW+ Q   C + +F   Y  V F    A     R  L++    +D + + +P+ +       V+ FS  + AKA  +  T+ ++   + ++     + +Y +DY LF
Sbjct:   96 VPKCGTSRWQTFLRWLVGVQDWASNP-HNRDANGYIGGLMQLKHLPRAEAIQIML-DPSWTKMAVVRDPLDRLRSAYLDKIAGGNDPNNTHLTKDLFGLPYEAFNATNFP--------------------------DFVTRVEFGMHHALEHENPHWQRQSRTCDLGKFLPFYQHVFFM---APDKSMRAELSDC--FIDAVAKTAPNPS------AVRNFSFGESAKALAEHRTDAKDHATYDEQLCQKARQLYAEDYELF 318          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A5J4YVB4_PORPP (Carbohydrate sulfotransferase 14 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVB4_PORPP)

HSP 1 Score: 83.2 bits (204), Expect = 1.520e-14
Identity = 67/263 (25.48%), Postives = 120/263 (45.63%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDW-DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPG--VSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFI---VKRFSSNQDAK--AQGATNKRERYFSKEALDAIKMVYGKDYSLFGEYFEEHSASS 765
            V KVA + ++  +R   G  D+ D    H + ++G+  L+     ++E +M D ++LKFV VR+P DR+LS +LNK +  + ++  Y  ++ Q +    +++RD  ++ K            F++F+  +      +   +N HW  Q   CS+  F   + V  F NMSA                          AEL+ + +   ++RF S +D K  A  A+ K  +Y+S + ++ ++  Y  D+    EY     A S
Sbjct:  267 VPKVANSNFKMLIRKFEGFEDYADLLTAHSRARSGLRFLSSYSVEEVEALMKDPTFLKFVFVRNPLDRVLSCYLNKIVNKDPKSEEYATYLGQLYGWRFLTQRDYKSERK----------PSFQEFVNAISLQSPWQ---MNEHWALQSFLCSLDVFPYDF-VGRFENMSAD-------------------------AELVLQAVGRVLERFPSQKDIKFLANEASKKINKYYSPQIMERVRNTYACDFRSMPEYATPRHAQS 490          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A7S3ED89_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED89_9RHOD)

HSP 1 Score: 79.0 bits (193), Expect = 4.500e-13
Identity = 64/244 (26.23%), Postives = 105/244 (43.03%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPI-HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATNKRERYFSKEALDAIKMVYGKDYSL 729
            + K+AC+ W+   R + G  D+    + HD+  +G+  L      +   M+ D  WLKFV VRDPA RLLSA+L+K    E  +  + +F  Q   G   R  A +    +         F +F++ V    R     +N HW PQ   C + +F   + V  F N  A          +A  ++D + +P         EF  +   S     + G   K + +F+ E    +++ + +DY L
Sbjct:  219 LPKIACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSPEFIKFFDQLL-GFQYRKNAVELFMPS---------FEEFIMYV---GRQNDFDMNEHWAPQVYLCQMDKFPYDF-VGRFENYDA----------DAFAVLDALGQPQE-------EFPSQ---SKLGFPSMGTREKMDEHFTDEIRTQVELKFERDYRL 428          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A812MHH0_9DINO (Chst9 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MHH0_9DINO)

HSP 1 Score: 77.0 bits (188), Expect = 1.010e-12
Identity = 68/251 (27.09%), Postives = 110/251 (43.82%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRK----ARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKA--QGATNKRERYFSKEALDA-IKMVYGKDYSLF 732
            V K   + W++ LRW++G+ DW + P      N I  L + K    A  I++M+ D SW K  VVRDP DRL SA+L+K  G    N P      +   G+   +  + +             F DF+  V   +R      N HW+ Q   C ++ F   Y  V F     +    R  L++    ++ + + +P+ +       V+ FS  + AKA  +  T+ ++     E L    + +Y +DY LF
Sbjct:   88 VPKAGTSRWQRFLRWLVGVQDWASNPHIRDANNYIGGLMQLKHLPRAEAIQIML-DPSWTKMAVVRDPLDRLRSAYLDKIAGA---NDPGNTNFTKHLFGLPYENFTSTS-------------FSDFLRRVEFGMRHSLDHENKHWQRQSHRCDLSTFLPFYQHVFFMPPDKT---MRAELSDC--FIEAVAKTAPNPS------AVRNFSFGESAKALAEHRTDAKDHATYDEQLCLKARQLYAEDYELF 310          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A7S2ZL45_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL45_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 4.910e-12
Identity = 51/169 (30.18%), Postives = 77/169 (45.56%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPI-HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSA 504
            + K+AC+ W+   R + G  D+    + HD+  +G+  L      +   M+ D  WLKFV VRDPA RLLSA+L+K    E  +  + +F  Q   G   R  A +    +         F +F++ V    R     +N HW PQ   C + +F   + V  F N  A
Sbjct:  219 LPKIACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSPEFIKFFDQLL-GFQYRKNAVELFMPS---------FEEFIMYV---GRQNDFDMNEHWAPQVYLCQMDKFPYDF-VGRFENYDA 373          
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A812M394_9DINO (Chst8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M394_9DINO)

HSP 1 Score: 75.1 bits (183), Expect = 4.920e-12
Identity = 64/250 (25.60%), Postives = 105/250 (42.00%), Query Frame = 1
Query:    1 VSKVACAEWRKTLRWMLGIPDWDTGPI------HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATNKRERYFSKEALDAIKMVYGKDYSLF 732
            V K   + W + LRW+ G PDWD  P       H  G   +  L R +A  I   M D  W K  VVRDP DRL SA+L++ +G    N  + + +   +  +            A+M+      F DF+  V   +       + HW+ Q   C + +F   YH V       S    R  +++ V  ++ + + +P+ AE+    +  R S +  A    A +     + +E     + +Y +DY +F
Sbjct:   90 VQKAGSSRWLRLLRWLAGSPDWDGNPHFLDSEGHPGGLRRLEHLPREEAVQI---MRDPKWTKIAVVRDPLDRLRSAYLDRVVGATEPNEIFEKRLFAHYQSL------------ASMS------FSDFLARVELGMHFLE-NEDVHWQRQSRRCDLGKFLPLYHHVFIIPPDKSA---RAEVSDCV--LEALAKTAPNPAEVRNFSMTSRASESLVAHRTDAESHST--YDEELCLKARQLYAEDYEVF 310          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2B9_ECTSI1.380e-17692.22Similar to dermatan 4-sulfotransferase-1 n=1 Tax=E... [more]
A0A6H5JC58_9PHAE9.900e-12096.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPX9_ECTSI1.200e-3732.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKQ4_9PHAE4.940e-3532.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812MLT8_9DINO1.330e-1426.72CHST8 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A5J4YVB4_PORPP1.520e-1425.48Carbohydrate sulfotransferase 14 n=1 Tax=Porphyrid... [more]
A0A7S3ED89_9RHOD4.500e-1326.23Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A812MHH0_9DINO1.010e-1227.09Chst9 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A7S2ZL45_9RHOD4.910e-1230.18Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A812M394_9DINO4.920e-1225.60Chst8 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14411contigEcto-sp13_S_contig14411:128..3098 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score497.3
Seed ortholog evalue4.4e-138
Seed eggNOG ortholog2880.D7G2B9
Model size775
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2EWIE@1,2SYBY@2759
Ec32 ortholog descriptionCarbohydrate sulfotransferase-related
Ec32 orthologEc-16_001720.1
Cds size774
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14411.3392.1prot_Ecto-sp13_S_contig14411.3392.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14411 128..3098 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462769.2701912-CDS-Ecto-sp13_S_contig14411:127..1961681462769.2701912-CDS-Ecto-sp13_S_contig14411:127..196Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14411 128..196 -
1681462769.2812948-CDS-Ecto-sp13_S_contig14411:840..10141681462769.2812948-CDS-Ecto-sp13_S_contig14411:840..1014Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14411 841..1014 -
1681462769.2903152-CDS-Ecto-sp13_S_contig14411:1684..18971681462769.2903152-CDS-Ecto-sp13_S_contig14411:1684..1897Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14411 1685..1897 -
1681462769.2994757-CDS-Ecto-sp13_S_contig14411:2201..23491681462769.2994757-CDS-Ecto-sp13_S_contig14411:2201..2349Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14411 2202..2349 -
1681462769.3071365-CDS-Ecto-sp13_S_contig14411:2645..27251681462769.3071365-CDS-Ecto-sp13_S_contig14411:2645..2725Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14411 2646..2725 -
1681462769.3149743-CDS-Ecto-sp13_S_contig14411:3008..30981681462769.3149743-CDS-Ecto-sp13_S_contig14411:3008..3098Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14411 3009..3098 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14411.3392.1

>prot_Ecto-sp13_S_contig14411.3392.1 ID=prot_Ecto-sp13_S_contig14411.3392.1|Name=mRNA_Ecto-sp13_S_contig14411.3392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp
VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMM
NDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKR
DAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCS
IARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLRE
FIVKRFSSNQDAKAQGATNKRERYFSKEALDAIKMVYGKDYSLFGEYFEE
HSASSLQ*
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mRNA from alignment at Ecto-sp13_S_contig14411:128..3098-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14411.3392.1 ID=mRNA_Ecto-sp13_S_contig14411.3392.1|Name=mRNA_Ecto-sp13_S_contig14411.3392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2971bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14411:128..3098- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTCCAAGGTGGCTTGTGCGGAATGGCGGAAGACGCTGAGATGGATGCT CGGGATACCGGACTGGGATACGGGACCAATACACGACCAGGTGAGGGAGT GAATGCTGTGTCTGCTGCCGGTGGTTTCATTCGATCGTAGCAAGTCCTAA ACGCCGCGCACTAACTACTTTCATCCATTGCTGCAGCCGTGTTTCCCGAA CAACGCATGTAACCCTCGATGCTTCCCCTCGGAAGATGCGTTTCTCGCTG ACGTGGCTTGCCATTTTGTTTTCGTTCTTTCTTCTTCCCGGCACCCTTTT TACCTGGATGTTTCCAATGGAGGGTGGCCGCGATGGTAACTAGCGCACGT GGTGTTTTTTTTTCGTGTCACAGGGGAAGAACGGAATACCGCTGCTTGCC CGGAGAAAGGCCCGCGACATCGAGCTAATGATGAACGACGATAGCTGGCT CAAGTGAGTGGAAGGAAGGGACGGTTCGTCCATGTGTATGTCGCGCATCT ATGTTGCGGCCGCGGTATAGATGAAGAACAGGTTGAGATGGTTCTTCTAC TGACGGTGCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCTTTCCTTGCTA GGTGTTTCTTTGGGTGGGGTCGCGGTGGCAGGCGTCTGTGTGGTTTNNNN NNNNNNGGGGAAAAAAGTAAGAAAAGGTTGGGGTTGTTTTTTTTTTGCGG GCCCCCCCCCCCCCCCCCCCCGCCCTTACGTGAACCGTTGCTTGAACAGG TTTGTCGTGGTGCGAGATCCGGCTGACAGGCTGCTGTCGGCTTTCTTGAA CAAGTGCTTGGGCGGGGAGTGGCAGAACTGCCCGTACACGGAGTTCATGC CGCAGCGTTTCCCCGGGGTATCGAAACGCGATGCCGCAACAGACACCGTG AGTATACCTATCACTTGTAGCTCCATTGTTGTCGCCAACAGCTGTTGCAG TTGTACTTGAATAATAGTACGTCTGGCAAGGTCGCCGTGGACGCCGTGGT TACCGTTGACCTCAAGGTTCGTTGTCGGCGGCAGCTGTTGCAACCCACCG TCACTAGGGGTGCTTGCTTTTTCCTCCCCTATCTCCCTGTGCCCCCACCG GCCGTCTCCCCGTGCTGCCTGCCGCCGCGCTTATAAGTTTAACCCTTCCG CCTTTCCCCCGTCCGTGTGTTGGAATCCGCCCCCCGCCTACACCCGTGCA GAAGTTCCGCGCGGCGATGAACGACGAGCCCCGAAAGGTGTTCCGCGACT TCATGCTCGGGGTGCGAAAGGACGTGAGGCTGAGGGGTTGCAAGGTCAAC TCACACTGGCGGCCTCAGCACTGCTTCTGCTCGATCGCCCGGTTCAGACA GTCGTATCATGTGGTGCCCTTCGCGAACATGTCGGCAAGTCCAAGTCGAT TTAGACTCGGTTTGGTGTTGAATAAATTGTTTGGGATGTGTTGTACTTTT TGTCCTGTGCCGCTAAATCACCGTGTTGGGCTTCGGGCAGCGGAAAAATG CTTCCGAGAGTGCGCCCGATTGTGTCGTCGCATGACGAGAACTACTAGTT GTGTGCGCTGCGATTTGGCGCGTCTGCCTTTGTGTTAGTAATGATGAAAA TAAAAAAATCAACGGTTGCGGTGGAAGGGGCTAATGGAGCAATCAATCCT TATCTGCGTTCTCTCGAACGCCGTCCCGCCGGTGCCTTCCTGCCTGTGGT TCCGACGCCGCTTGGTTGTGACCCGTACGCAAGAGACGGCTGTGAACCAG ATGTGGGCCACATCTACAGGTTATGACTTGTGCAAGAGACTGCAGTGAAT CAGATGTAGGTCACATCTAGGTTTTGGCCAGTGCGCAAGAGACTGCTGTG AATCGGACGGACGTGGGCGTGCCGTTTTGCAGCCATTGACCACTGCAGCC CTCGCTTGCACATGATGCTGGGCCCACACCCGCACCCCCAACTTTACGTA CGCCTTGTACGACAGAGAGCAACACCGACGAGTGGAACAAGATAGAGGCA GGCCACATCTACAATGTCCGCGTTTTCTCTTGCTATTTTTTTCGTATGTC GCATGCCGTGAAAAAAAAATGGGTATGTTTTTAGACGGAGGCGGTGAATC TGGTGGATCACATGCGGAGGCCTTCCCCGGACCGTGCGGAGCTGCTGAGG GAGTTTATAGTGAAGCGGTTCAGCAGCAACCAGGACGCGAAGGCGCAGGG TGCCACCAACAAGAGGGAGAGGTACTTTTCGAAGGAGGCGCTGGACGCCA TCAAGATGGTGAGAGATGCGGACAAGACAAACAGGCAAACAGAGAGAGAG AGAGAGTGAGTCAGACAGCGAGACAGACCTACAGTCAGTCAGACAGACAG ACAGACAGACAGAAAGAAAAGCAGTCAGACAGACAGACAGACAGACAGAC ACGCGGGAAGGCAAGCGGGCAGACAGACAGATGGACGAGACAGACGGGTG ACAAGGATGTTCAGAGGTAGATCGAACTAATTGTTTTTCTTTCTTTCATG GACAGATGTCGGGCGCAACGGGCGGATGCAGAAGGGGATAGGTCCGCCGG CCCTTTCGTAGTTTTGAAGCTATGCCAGTAGCGCGGCATGCGCCCACATG GTTTGTTGAAGTGTCTTGGGTCAAAAGAAGAGGCGCGGCCCTCCCTTCTC GTAAGGAATACGTCGCCCAATGATGGGGTCCCTGACAAAAGTGGAAGCGA AATAATGTGGAACCCCTAAGAGCAAATTTTGGCGAAATAGGAAGGAACGA TTGGCCATCGGTGATCCGTCCTGTGGGAAAAACGCTCCGTCCTCTCGAGG ACGCGCGGTCAATGGTCTTGCAACGAAGGCATGCAAAACATGAGTACTCC CGCCCCCCCCACCTGCGTGCCTTGCGAAACGCCTTTTTGTTACGACGTTG AGGTGTACGGCAAGGACTACTCTCTCTTCGGCGAGTACTTCGAGGAGCAC TCCGCTTCAAGCTTGCAATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14411:128..3098-

>mRNA_Ecto-sp13_S_contig14411.3392.1 ID=mRNA_Ecto-sp13_S_contig14411.3392.1|Name=mRNA_Ecto-sp13_S_contig14411.3392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14411:128..3098- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTCCAAGGTGGCTTGTGCGGAATGGCGGAAGACGCTGAGATGGATGCT
CGGGATACCGGACTGGGATACGGGACCAATACACGACCAGGGGAAGAACG
GAATACCGCTGCTTGCCCGGAGAAAGGCCCGCGACATCGAGCTAATGATG
AACGACGATAGCTGGCTCAAGTTTGTCGTGGTGCGAGATCCGGCTGACAG
GCTGCTGTCGGCTTTCTTGAACAAGTGCTTGGGCGGGGAGTGGCAGAACT
GCCCGTACACGGAGTTCATGCCGCAGCGTTTCCCCGGGGTATCGAAACGC
GATGCCGCAACAGACACCAAGTTCCGCGCGGCGATGAACGACGAGCCCCG
AAAGGTGTTCCGCGACTTCATGCTCGGGGTGCGAAAGGACGTGAGGCTGA
GGGGTTGCAAGGTCAACTCACACTGGCGGCCTCAGCACTGCTTCTGCTCG
ATCGCCCGGTTCAGACAGTCGTATCATGTGGTGCCCTTCGCGAACATGTC
GGCAAGTCCAAGTCGATTTAGACTCGGTTTGACGGAGGCGGTGAATCTGG
TGGATCACATGCGGAGGCCTTCCCCGGACCGTGCGGAGCTGCTGAGGGAG
TTTATAGTGAAGCGGTTCAGCAGCAACCAGGACGCGAAGGCGCAGGGTGC
CACCAACAAGAGGGAGAGGTACTTTTCGAAGGAGGCGCTGGACGCCATCA
AGATGGTGTACGGCAAGGACTACTCTCTCTTCGGCGAGTACTTCGAGGAG
CACTCCGCTTCAAGCTTGCAATAG
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