mRNA_Ecto-sp13_S_contig14411.3392.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: D7G2B9_ECTSI (Similar to dermatan 4-sulfotransferase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B9_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 1.380e-176 Identity = 237/257 (92.22%), Postives = 244/257 (94.94%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATNKRERYFSKEALDAIKMVYGKDYSLFGEYFEEHSASSLQ 771
++KVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVR+DVRL GCKVNSHWRPQHCFCSIARFR+SYHVVPFANMS TEAVNLVDHMRRPSPDRAELLREFIV+RFSSNQDAKAQGAT+KRERYFS+EALD IKMVYGKDYSLFGEYFEEHSAS LQ
Sbjct: 17 IAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLTGCKVNSHWRPQHCFCSIARFRESYHVVPFANMS----------TEAVNLVDHMRRPSPDRAELLREFIVQRFSSNQDAKAQGATSKRERYFSQEALDVIKMVYGKDYSLFGEYFEEHSASRLQ 263
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A6H5JC58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC58_9PHAE) HSP 1 Score: 359 bits (921), Expect = 9.900e-120 Identity = 163/169 (96.45%), Postives = 169/169 (100.00%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSAS 507
++KVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAA+NDEPRKVFRDFMLGV+KDVRLRGCKVNSHWRPQHCFCSIARFR+SYHVVPFANMSA+
Sbjct: 182 IAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAINDEPRKVFRDFMLGVQKDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSAN 350
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: D8LPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX9_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.200e-37 Identity = 84/262 (32.06%), Postives = 126/262 (48.09%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDW--DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQ----------NCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRG--CKV-NSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSN--QDAKAQGATNKRERYFSKEALDAIKMVYGKDYSLFG 735
++KVA AEW+++LRWM+GI DW + +H GKNG+ L I + D + +FVVVRDPA+RL+SAFLNKC+ + NC Y MP FP ++ T R + EP F F G+ +++ G CKV N H++PQ CFC + ++HV+PF NMSA + F + E + + H A + + I K Q + G + R + + + + KD + G
Sbjct: 76 IAKVASAEWKRSLRWMVGIEDWMGNHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQTLRDLVEREPEDTFYHFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPISPHKEATDGGTAGISKSSIGKDGPGGMAQGGRGTGVSGSRRQEIADFLTERFETARDKDVKVTG 337
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A6H5JKQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ4_9PHAE) HSP 1 Score: 138 bits (347), Expect = 4.940e-35 Identity = 87/265 (32.83%), Postives = 126/265 (47.55%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKC----LGGEWQNCPYTEFMP-----QRFPGVSKRDAATDTK---FRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQD--AKAQGATNKRERYFSKEALDAIKMVYGKDYSLFGEYFEEH 753
+ KVAC EW K RW+ G DW P H K+G+ +L ++N WLKF VVR+PA RLLS FL KC + E+ NCPY E P +RFP DT + A + +F ++ + + V+ C N HW PQ+C CS+ + +V +ANM TEA + S R ++EF+V R +N + K A ++ + ++ EAL A+ Y KDY LF +Y+ E+
Sbjct: 120 IQKVACTEWIKVFRWIDGHEDW-AEPRHQ--KHGLDVLEEMDVERGNQILNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYSNCPYLELWPDLFDRERFPDGVPTRPGVDTLAIVWEAFTSRGRDSMFAPYVEVITRRVKQDPCGQNKHWSPQYCHCSLDVTAPVFRIVGWANM-----------TEAASAAIVPFASSSARGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEAYTAEALQAVHEAYAKDYKLFSQYWVEN 370
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A812MLT8_9DINO (CHST8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MLT8_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 1.330e-14 Identity = 70/262 (26.72%), Postives = 110/262 (41.98%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNG-----IPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQN----------CPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKA--QGATNKRERY-FSKEALDAIKMVYGKDYSLF 732
V K + W+ LRW++G+ DW + P H++ NG + L +A I++M+ D SW K VVRDP DRL SA+L+K GG N PY F FP DF+ V + N HW+ Q C + +F Y V F A R L++ +D + + +P+ + V+ FS + AKA + T+ ++ + ++ + +Y +DY LF
Sbjct: 96 VPKCGTSRWQTFLRWLVGVQDWASNP-HNRDANGYIGGLMQLKHLPRAEAIQIML-DPSWTKMAVVRDPLDRLRSAYLDKIAGGNDPNNTHLTKDLFGLPYEAFNATNFP--------------------------DFVTRVEFGMHHALEHENPHWQRQSRTCDLGKFLPFYQHVFFM---APDKSMRAELSDC--FIDAVAKTAPNPS------AVRNFSFGESAKALAEHRTDAKDHATYDEQLCQKARQLYAEDYELF 318
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A5J4YVB4_PORPP (Carbohydrate sulfotransferase 14 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVB4_PORPP) HSP 1 Score: 83.2 bits (204), Expect = 1.520e-14 Identity = 67/263 (25.48%), Postives = 120/263 (45.63%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDW-DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPG--VSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFI---VKRFSSNQDAK--AQGATNKRERYFSKEALDAIKMVYGKDYSLFGEYFEEHSASS 765
V KVA + ++ +R G D+ D H + ++G+ L+ ++E +M D ++LKFV VR+P DR+LS +LNK + + ++ Y ++ Q + +++RD ++ K F++F+ + + +N HW Q CS+ F + V F NMSA AEL+ + + ++RF S +D K A A+ K +Y+S + ++ ++ Y D+ EY A S
Sbjct: 267 VPKVANSNFKMLIRKFEGFEDYADLLTAHSRARSGLRFLSSYSVEEVEALMKDPTFLKFVFVRNPLDRVLSCYLNKIVNKDPKSEEYATYLGQLYGWRFLTQRDYKSERK----------PSFQEFVNAISLQSPWQ---MNEHWALQSFLCSLDVFPYDF-VGRFENMSAD-------------------------AELVLQAVGRVLERFPSQKDIKFLANEASKKINKYYSPQIMERVRNTYACDFRSMPEYATPRHAQS 490
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A7S3ED89_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED89_9RHOD) HSP 1 Score: 79.0 bits (193), Expect = 4.500e-13 Identity = 64/244 (26.23%), Postives = 105/244 (43.03%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPI-HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATNKRERYFSKEALDAIKMVYGKDYSL 729
+ K+AC+ W+ R + G D+ + HD+ +G+ L + M+ D WLKFV VRDPA RLLSA+L+K E + + +F Q G R A + + F +F++ V R +N HW PQ C + +F + V F N A +A ++D + +P EF + S + G K + +F+ E +++ + +DY L
Sbjct: 219 LPKIACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSPEFIKFFDQLL-GFQYRKNAVELFMPS---------FEEFIMYV---GRQNDFDMNEHWAPQVYLCQMDKFPYDF-VGRFENYDA----------DAFAVLDALGQPQE-------EFPSQ---SKLGFPSMGTREKMDEHFTDEIRTQVELKFERDYRL 428
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A812MHH0_9DINO (Chst9 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MHH0_9DINO) HSP 1 Score: 77.0 bits (188), Expect = 1.010e-12 Identity = 68/251 (27.09%), Postives = 110/251 (43.82%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRK----ARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKA--QGATNKRERYFSKEALDA-IKMVYGKDYSLF 732
V K + W++ LRW++G+ DW + P N I L + K A I++M+ D SW K VVRDP DRL SA+L+K G N P + G+ + + + F DF+ V +R N HW+ Q C ++ F Y V F + R L++ ++ + + +P+ + V+ FS + AKA + T+ ++ E L + +Y +DY LF
Sbjct: 88 VPKAGTSRWQRFLRWLVGVQDWASNPHIRDANNYIGGLMQLKHLPRAEAIQIML-DPSWTKMAVVRDPLDRLRSAYLDKIAGA---NDPGNTNFTKHLFGLPYENFTSTS-------------FSDFLRRVEFGMRHSLDHENKHWQRQSHRCDLSTFLPFYQHVFFMPPDKT---MRAELSDC--FIEAVAKTAPNPS------AVRNFSFGESAKALAEHRTDAKDHATYDEQLCLKARQLYAEDYELF 310
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A7S2ZL45_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL45_9RHOD) HSP 1 Score: 75.5 bits (184), Expect = 4.910e-12 Identity = 51/169 (30.18%), Postives = 77/169 (45.56%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPI-HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSA 504
+ K+AC+ W+ R + G D+ + HD+ +G+ L + M+ D WLKFV VRDPA RLLSA+L+K E + + +F Q G R A + + F +F++ V R +N HW PQ C + +F + V F N A
Sbjct: 219 LPKIACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSPEFIKFFDQLL-GFQYRKNAVELFMPS---------FEEFIMYV---GRQNDFDMNEHWAPQVYLCQMDKFPYDF-VGRFENYDA 373
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Match: A0A812M394_9DINO (Chst8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M394_9DINO) HSP 1 Score: 75.1 bits (183), Expect = 4.920e-12 Identity = 64/250 (25.60%), Postives = 105/250 (42.00%), Query Frame = 1
Query: 1 VSKVACAEWRKTLRWMLGIPDWDTGPI------HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRKDVRLRGCKVNSHWRPQHCFCSIARFRQSYHVVPFANMSASPSRFRLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATNKRERYFSKEALDAIKMVYGKDYSLF 732
V K + W + LRW+ G PDWD P H G + L R +A I M D W K VVRDP DRL SA+L++ +G N + + + + + A+M+ F DF+ V + + HW+ Q C + +F YH V S R +++ V ++ + + +P+ AE+ + R S + A A + + +E + +Y +DY +F
Sbjct: 90 VQKAGSSRWLRLLRWLAGSPDWDGNPHFLDSEGHPGGLRRLEHLPREEAVQI---MRDPKWTKIAVVRDPLDRLRSAYLDRVVGATEPNEIFEKRLFAHYQSL------------ASMS------FSDFLARVELGMHFLE-NEDVHWQRQSRRCDLGKFLPLYHHVFIIPPDKSA---RAEVSDCV--LEALAKTAPNPAEVRNFSMTSRASESLVAHRTDAESHST--YDEELCLKARQLYAEDYEVF 310 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14411.3392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14411.3392.1 >prot_Ecto-sp13_S_contig14411.3392.1 ID=prot_Ecto-sp13_S_contig14411.3392.1|Name=mRNA_Ecto-sp13_S_contig14411.3392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp VSKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMback to top mRNA from alignment at Ecto-sp13_S_contig14411:128..3098- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14411.3392.1 ID=mRNA_Ecto-sp13_S_contig14411.3392.1|Name=mRNA_Ecto-sp13_S_contig14411.3392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2971bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14411:128..3098- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14411:128..3098- >mRNA_Ecto-sp13_S_contig14411.3392.1 ID=mRNA_Ecto-sp13_S_contig14411.3392.1|Name=mRNA_Ecto-sp13_S_contig14411.3392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14411:128..3098- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |