mRNA_Ecto-sp13_S_contig14404.3387.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14404.3387.1
Unique NamemRNA_Ecto-sp13_S_contig14404.3387.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5JXN8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN8_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 3.470e-56
Identity = 119/179 (66.48%), Postives = 130/179 (72.63%), Query Frame = 2 
Query: 1229 SMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQGDV*GME*KGKDESCTRA*EVG*R------GRK*YR*DRQTREDFF*PPLAKKKGTIGHR 1747
            S+    RE +  RK+ + D+EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRERRRRHRTVD++DDEFKCDCGFECE RVHVVAECP YKKE EVYVTELGKI+GT R+     M      E  T A  +G R      GR   R    TRED F PPLAK KGTIGHR
Sbjct:  317 SVACAEREEQNLRKESK-DKEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYRE-----MFEAWTREEWTVA-VLGHRRWVEKTGRDIVR--IITREDIFEPPLAKLKGTIGHR 485
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5J590_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J590_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 8.880e-52
Identity = 147/330 (44.55%), Postives = 176/330 (53.33%), Query Frame = 3 
Query:  855 LQNAGEEWEGNKKVVKDLEAAHMKAAKIILGCSKRTSNAAVRAELGIQSLRSVRDARKLTYAVSHVRDDRGEVADNCMGGEVGKQ*EG*TTHGMGQCCRGRMEGARHR*R*NAGNEGFTVVQGEDLCCLCRERTESKERNQG*IGRVLKCTEC*RKERGSRIITY----MGQWMQEQ------SLRSNSGPGTQAFENVDE---DIGR*MTKTTSSNVIAASNAKAVFM*SRSVRGTRRRRKCT*LSWEK*MGRRD---REMFEAWNRKERTKAVLGHRRWVEEAGSDIGRIDKPGKTFFSHLWQRRKERLAIGDRSCGNNAPSSRGRVV 1796
            L+ AGE WEGNKKVV++LEAA MKAAKIILGCSK TSNAAVRAELGIQS RS RDARKLT+                MGG +G++              GRMEG RH        EG    + E +   C ER +   R +      L+     ++  G +   +     G  ++ +       LR          E  DE   D G         +V+A      ++   R +  T              +G+ D   REMFEAWNR+ERT AVLGHRRWVE+AG DI RID+ GKTF SHLWQ RKERLAIGDRSCGNNAPSSRGRVV
Sbjct:   79 LEYAGEVWEGNKKVVRELEAAQMKAAKIILGCSKYTSNAAVRAELGIQSPRSGRDARKLTWQYR-------------MGG-MGEE-------------GGRMEGVRHDEDETLETEGLQGFK-EKISGGCAEREKQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCG--FECEDRVHVVAEC---PLYKKERELYMTE-------------LGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVV 362
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5KUP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP1_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.490e-51
Identity = 107/169 (63.31%), Postives = 118/169 (69.82%), Query Frame = 2 
Query: 1229 SMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQGDV*GME*KGKDESCTRA*E----VG*RGRK*YR*DRQTREDFF*PPLAK 1723
            S+    RE +  RK+ + D+EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRE RRRHRTVDD+DDEFKCDC FECE RVHVVAECP YKKE EVYVTELGKI GT R+      E   ++E           V   GR   R DR  +  FF PPLAK
Sbjct:   59 SVACAEREEQNLRKESK-DKEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRECRRRHRTVDDEDDEFKCDCDFECEDRVHVVAECPLYKKEREVYVTELGKIAGTYREM----FEAWNREERTVAVLRHRRWVEKAGRDIVRIDRLGKT-FFEPPLAK 220
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5L0Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q3_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 3.480e-51
Identity = 105/157 (66.88%), Postives = 118/157 (75.16%), Query Frame = 2 
Query: 1139 SML*RTYGR-----GSTSMK-MKRWKRR--VYSGSRRRSMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQ 1585
            S L RTYGR     G+   K ++ +K +  VY GS RR +LLVPREN          +EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRERR RHRTVDD+ +EF+CDCGFEC  RVHVVAECP YKKE EVYVTELGKI+ T R+
Sbjct:   80 SALMRTYGRDIDEDGTLETKGLQGFKEKISVYRGSGRRYLLLVPREN----------KEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRERRGRHRTVDDEGNEFRCDCGFECIDRVHVVAECPLYKKEREVYVTELGKIDRTYRE 225
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5L9S2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9S2_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 4.430e-51
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 2 
Query: 1229 SMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQ 1585
            S+    RE +  RK+ + D+EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRERRRRHRTVDD+DDEFKCDCGFEC+ RVHVVAECP YKKE EVYVTELGKI+GT R+
Sbjct:   62 SVACAEREEQNLRKESK-DKEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDDEDDEFKCDCGFECKDRVHVVAECPLYKKEREVYVTELGKIDGTYRE 178
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5JS90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS90_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 4.470e-50
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 2 
Query: 1229 SMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQ 1585
            S+    RE +  RK+ + D+EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRERRRRHRTVDD+DDEFKCDCGFECE RVHVVAECP YKKE EVY+TELGKI+GT R+
Sbjct:  150 SVACAEREEQNLRKESK-DKEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDDEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYMTELGKIDGTYRE 266
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5JBW3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW3_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 8.910e-50
Identity = 93/134 (69.40%), Postives = 107/134 (79.85%), Query Frame = 2 
Query: 1184 MKRWKRRVYSGSRRRSMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQ 1585
            +K +K+++Y       +    RE +  RK+ + D+EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRE RRRHRTVDDKDDEFKCDCGFECE R HVVAECP YK+E EVYVTELGKI+ T R+
Sbjct:   31 VKGFKKKIY-------VACAEREEQNLRKESK-DKEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRESRRRHRTVDDKDDEFKCDCGFECEDRAHVVAECPWYKEEREVYVTELGKIDRTYRE 155
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5KMG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG6_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.870e-49
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 2 
Query: 1229 SMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQ 1585
            S+    RE +  RK+ + D+EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRERRRRHRTVD++DDEFKCDCGFECE RVHVVAECP YKKE EVYVTELGKI+GT R+
Sbjct:  166 SVACAEREEQNLRKQIK-DKEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYRE 282
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5JT82_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT82_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.050e-49
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 2 
Query: 1229 SMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQ 1585
            S+    RE +  RK+ + D+EGLEVYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRERRRRHRTVD++DDEFKCDCGFECE RVHVVAECP YKKE EVYVTELGKI+GT R+
Sbjct:  210 SVACAEREEQNLRKESK-DKEGLEVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYRE 326
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Match: A0A6H5K4L9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4L9_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 3.320e-49
Identity = 113/189 (59.79%), Postives = 129/189 (68.25%), Query Frame = 2 
Query: 1229 SMLLVPRENRI*RKKPRIDREGLEVYGMLKEGTGFKDYYIHGPMDAGTKLKVKFRTGDTGLRERRRRHRTVDDKDDEFKCDCGFECEGRVHVVAECPRYKKETEVYVTELGKINGT*RQGDV*GME*KGKDESCTRA*EVG*RG------RK*YR*DRQTREDFF*PPLAKKKG--TIGHR*SVLWEQC 1771
            S+    RE +  RK+ + D+EGL VYGMLKEG GFKDY +HGPMDAGTKLKVKFRTGD GLRERRRRHRTVD++DDEFKCDCGFECE RVHVVAECP YKKE EVYVTELGKI+GT R+      E   ++E       +G R       R   R DR   ED F PPLAK+K    IG +   +W  C
Sbjct:  502 SVACAEREEQNLRKESK-DKEGLAVYGMLKEGIGFKDY-LHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREM----FEAWNREERTVAV--LGHRRWVEKAKRDMVRIDR-LEEDIFEPPLAKRKERLAIGVQGEDIWCLC 681
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14404.3387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXN8_9PHAE3.470e-5666.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J590_9PHAE8.880e-5244.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUP1_9PHAE2.490e-5163.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0Q3_9PHAE3.480e-5166.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L9S2_9PHAE4.430e-5178.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS90_9PHAE4.470e-5078.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBW3_9PHAE8.910e-5069.40Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KMG6_9PHAE1.870e-4978.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT82_9PHAE2.050e-4978.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4L9_9PHAE3.320e-4959.79Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14404contigEcto-sp13_S_contig14404:2629..4426 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score77.0
Seed ortholog evalue5.8e-12
Seed eggNOG ortholog2880.D7G873
Model size1798
KEGG rclassRC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496
KEGG koko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437
KEGG ReactionR00851,R03875,R03938,R04866,R04867,R09380
KEGG Pathwayko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202
KEGG ModuleM00089
Hectar predicted targeting categorysignal peptide
Exons1
EggNOG free text desc.SET domain
EggNOG OGsCOG0553@1,COG2940@1,COG5076@1,KOG0383@2759,KOG0384@2759,KOG1075@1,KOG1075@2759,KOG1081@2759,KOG1474@2759
EC2.1.1.43,2.3.1.15,3.6.4.12
Cds size318
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462768.850426-UTR-Ecto-sp13_S_contig14404:2628..34221681462768.850426-UTR-Ecto-sp13_S_contig14404:2628..3422Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14404 2629..3422 +
1681462768.8800788-UTR-Ecto-sp13_S_contig14404:3740..44261681462768.8800788-UTR-Ecto-sp13_S_contig14404:3740..4426Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14404 3741..4426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462768.8689184-CDS-Ecto-sp13_S_contig14404:3422..37401681462768.8689184-CDS-Ecto-sp13_S_contig14404:3422..3740Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14404 3423..3740 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14404.3387.1prot_Ecto-sp13_S_contig14404.3387.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14404 3423..3740 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14404.3387.1

>prot_Ecto-sp13_S_contig14404.3387.1 ID=prot_Ecto-sp13_S_contig14404.3387.1|Name=mRNA_Ecto-sp13_S_contig14404.3387.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
MQAPVFVVFCVFFLQSYHRSLQNAGEEWEGNKKVVKDLEAAHMKAAKIIL
GCSKRTSNAAVRAELGIQSLRSVRDARKLTYAVSHVRDDRGEVADNCMGG
EVGKQ*
back to top

mRNA from alignment at Ecto-sp13_S_contig14404:2629..4426+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14404.3387.1 ID=mRNA_Ecto-sp13_S_contig14404.3387.1|Name=mRNA_Ecto-sp13_S_contig14404.3387.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14404:2629..4426+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGCAGGGGCGGGGGGCGAAGATGTCGGAGAGGAGGGAGCGTGATGATTC
GTGATGATGGATCTACGCGATTGATGATGATAGAGGTTGCGTTATCGACT
GGTTTGGTGTCGGCGGCGTCTGAGTGAGAGTCTTGAATCTAATCTAATGT
AATGATCGTGTGTCACGCCAATGCCAGCAGACAACTTTGGGCAACTCCGT
TTTTTTTCGGTGTGCTCGTTGGGTGTGGCGTGTAAAACATTGGACAACGA
GTTAATTAGAAGAAGAGTCTGAAGATCCTCGACCGAAGAAGCTCACTCTC
CGTGCTCCTTCCTCCCTCTGGGCTGCCTCATTCAGCGAGACAAAGCTACG
CATAGATGGATGCATATGCCATGCATGCATGCATCGACGGGTCTCTATCT
GTCTTCTTCTAGAGCGATAACCCCCCCCACATTCGATGTGGTATGATTGT
TGTTTTGTGTTTCTGTGTTTAGTATCTTGAGTAAGCCGAGGCACCACGCT
GGCTGGCCGGTCGGCTGACGAAGACAAGACACTCGGTCCGTATCGGTCTT
ACATTCAACTGTTGTTATAGGAGTGCGAAGCAGACGCAACATACAGACGG
TAGGCAGTCTACATTGTTCCCGGTAGGGACCAAAATCAAGCAAGACGGCC
AACAACCGACCGAACGCCTTGTTCTGCTTTTTGTGCTATTTTTTCTTTTC
CATGATGTGTGCCGTGATAATCTTTTTCAAGGATGCATCTATCAGCGTCG
CTCGACCCGAGAACCAAAAAACAAATCATGATGAATGAACGAACATGCAA
GCACCTGTTTTTGTAGTGTTTTGTGTGTTCTTTTTGCAATCGTACCACCG
CTCGCTACAGAACGCCGGGGAAGAATGGGAAGGAAATAAGAAGGTAGTGA
AAGATCTCGAGGCGGCGCACATGAAAGCAGCGAAAATCATCCTGGGATGC
TCCAAGCGCACAAGTAATGCAGCCGTCAGGGCAGAGTTGGGGATCCAGTC
CTTACGGTCGGTAAGAGACGCAAGGAAGCTGACATACGCAGTATCGCATG
TGCGGGATGATAGAGGAGAGGTTGCCGATAATTGTATGGGAGGCGAAGTG
GGCAAACAATAAGAGGGGTAGACAACCCACGGAATGGGTCAATGTTGTAG
AGGACGTATGGAAGGGGCTCGACATCGATGAAGATGAAACGCTGGAAACG
AAGGGTTTACAGTGGTTCAAGGAGAAGATCTATGTTGCTTGTGCCGAGAG
AGAACAGAATCTAAAGAAAGAAACCAAGGATAGATAGGGAGGGTCTTGAA
GTGTACGGAATGTTGAAGGAAGGAACGGGGTTCAAGGATTATTACATACA
TGGGCCAATGGATGCAGGAACAAAGCTTAAGGTCAAATTCAGGACCGGGG
ACACAGGCCTTCGAGAACGTCGACGAAGACATAGGACGGTAGATGACAAA
GACGACGAGTTCAAATGTGATTGCGGCTTCGAATGCGAAGGCCGTGTTCA
TGTAGTCGCGGAGTGTCCGCGGTACAAGAAGGAGACGGAAGTGTACGTGA
CTGAGCTGGGAAAAATAAATGGGACGTAGAGACAGGGAGATGTTTGAGGC
ATGGAATAGAAAGGAAAGGACGAAAGCTGTACTCGGGCATAGGAGGTGGG
TTGAAGAGGCAGGAAGTGATATCGGTAGGATAGACAAACCAGGGAAGACT
TTTTTTAGCCACCTTTGGCAAAGAAGAAAGGAACGATTGGCCATCGGTGA
TCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14404:2629..4426+

>mRNA_Ecto-sp13_S_contig14404.3387.1 ID=mRNA_Ecto-sp13_S_contig14404.3387.1|Name=mRNA_Ecto-sp13_S_contig14404.3387.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=318bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14404:2629..4426+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAAGCACCTGTTTTTGTAGTGTTTTGTGTGTTCTTTTTGCAATCGTA
CCACCGCTCGCTACAGAACGCCGGGGAAGAATGGGAAGGAAATAAGAAGG
TAGTGAAAGATCTCGAGGCGGCGCACATGAAAGCAGCGAAAATCATCCTG
GGATGCTCCAAGCGCACAAGTAATGCAGCCGTCAGGGCAGAGTTGGGGAT
CCAGTCCTTACGGTCGGTAAGAGACGCAAGGAAGCTGACATACGCAGTAT
CGCATGTGCGGGATGATAGAGGAGAGGTTGCCGATAATTGTATGGGAGGC
GAAGTGGGCAAACAATAA
back to top