mRNA_Ecto-sp13_S_contig14384.3378.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14384.3378.1
Unique NamemRNA_Ecto-sp13_S_contig14384.3378.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14384.3378.1 vs. uniprot
Match: A0A6H5JG41_9PHAE (PI3K/PI4K catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG41_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 5.130e-137
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 3 
Query:   51 MIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEARYLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIGHSLKKLPIKRRLSALDNELGRVNRMLLRRMQTR 659
            MIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEARYLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIG SLKKLPIKRRLSALDNELGRVNRMLLRRMQTR
Sbjct:    1 MIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEARYLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIGDSLKKLPIKRRLSALDNELGRVNRMLLRRMQTR 203
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BLAST of mRNA_Ecto-sp13_S_contig14384.3378.1 vs. uniprot
Match: A0A835ZF92_9STRA (PIK helical domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF92_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.290e-22
Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 3 
Query:   69 NAVAAWIYLWMTFQLGFYESTD---LLPRGPRLPPKHEARYLTA-FEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAV-----GRRP---------------QEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIGHSLKKLPIKRRLSALDNELGRVNRMLLRRMQTR 659
             A+  W+ LW++FQ    E      +   G    P  + +Y T    ELM +  D DVEF++PQLAAVL+ +  P+R   +T  V  RL + L++R   N  + + ++WQ  A      G  P               Q     W +       AA+ G NLP Q+ M+R+A+  D+M FVD L+ +   L    ++ RL+ L   LG +NR LLRR+ +R
Sbjct:    6 QAIHVWLTLWLSFQFTMDEIASGGGIKSPGYAPLPYADVQYWTQQMNELMEQVGDEDVEFYLPQLAAVLLRRDAPTRCNQVTTAVAVRLGSILRERAATNHMVGMHLLWQLRAATQGGAGLAPAGGRSXXXXXXXXXEQRGAEGWLSVVEP---AAVGGGNLPRQVAMRRQAFFCDNMRFVDRLVGLSRLLGATDVRIRLAELHRHLGELNRCLLRRIDSR 223
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14384.3378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG41_9PHAE5.130e-13799.51PI3K/PI4K catalytic domain-containing protein n=2 ... [more]
A0A835ZF92_9STRA4.290e-2232.13PIK helical domain-containing protein n=1 Tax=Trib... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14384contigEcto-sp13_S_contig14384:20..2877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score409.1
Seed ortholog evalue1.3e-111
Seed eggNOG ortholog2880.D7FJ66
Preferred namePI4KB
Model size659
KEGG rclassRC00002,RC00078
KEGG koko:K00888,ko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04011,ko04070,map00562,map01100,map04011,map04070
KEGG ModuleM00130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006897,GO:0006898,GO:0006935,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010256,GO:0010259,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030587,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031152,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0033554,GO:0035295,GO:0035556,GO:0036213,GO:0040011,GO:0042221,GO:0042330,GO:0042594,GO:0042710,GO:0043062,GO:0043063,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043327,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0071496,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0090702,GO:0097708,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098791,GO:0099120,GO:0140013,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
Exons5
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759
Ec32 ortholog descriptionPhosphatidylinositol 3-/4-kinase, catalytic domain
Ec32 orthologEc-10_000270.1
EC2.7.1.67
Cds size630
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14384.3378.1prot_Ecto-sp13_S_contig14384.3378.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14384 20..2848 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462768.02132-CDS-Ecto-sp13_S_contig14384:19..1131681462768.02132-CDS-Ecto-sp13_S_contig14384:19..113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14384 20..113 -
1681462768.0347004-CDS-Ecto-sp13_S_contig14384:422..5411681462768.0347004-CDS-Ecto-sp13_S_contig14384:422..541Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14384 423..541 -
1681462768.0514457-CDS-Ecto-sp13_S_contig14384:879..10291681462768.0514457-CDS-Ecto-sp13_S_contig14384:879..1029Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14384 880..1029 -
1681462768.0637984-CDS-Ecto-sp13_S_contig14384:1369..15191681462768.0637984-CDS-Ecto-sp13_S_contig14384:1369..1519Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14384 1370..1519 -
1681462768.073477-CDS-Ecto-sp13_S_contig14384:2731..28481681462768.073477-CDS-Ecto-sp13_S_contig14384:2731..2848Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14384 2732..2848 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462768.0831559-UTR-Ecto-sp13_S_contig14384:2848..28771681462768.0831559-UTR-Ecto-sp13_S_contig14384:2848..2877Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14384 2849..2877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14384.3378.1

>prot_Ecto-sp13_S_contig14384.3378.1 ID=prot_Ecto-sp13_S_contig14384.3378.1|Name=mRNA_Ecto-sp13_S_contig14384.3378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MPGVAWRMIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEAR
YLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSA
NLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDN
LPEQLRMQRRAYCADSMAFVDTLMDIGHSLKKLPIKRRLSALDNELGRVN
RMLLRRMQTR
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mRNA from alignment at Ecto-sp13_S_contig14384:20..2877-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14384.3378.1 ID=mRNA_Ecto-sp13_S_contig14384.3378.1|Name=mRNA_Ecto-sp13_S_contig14384.3378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2858bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14384:20..2877- (Ectocarpus species13 EcNAP12_S_4_19m)
ATCTTTACTATTGTTGGCGTGGGTGGCGGATGCCAGGCGTGGCCTGGAGG
ATGATTATCCAAGCAGGAAATGCTGTGGCAGCATGGATTTACCTCTGGAT
GACCTTCCAGCTTGGCTTCTACGAGTCGACGGACCTCCTCCCACGAGTGA
GTGACCACAGCAGTGCAGCACAGCAGCACCCGCTTCTCCTGCAGGTTAAT
CGCTGCCGTGATGACGCAGCTTAGATGAAGTAAGAACTTCTTGTGCTGCT
GCCTTGTCGTTGGCTGTCGAACTTGGTCCACTGCCGGGTTCTTGTCGACA
ACGAGAGAGTCACGAAAAACGTTGGACGGCCGGCCCAACATCAACTCCAG
GCAACATGTATGTCATCTCGTCTTGCGGTGTGTCGTCGGTGACATGTGCT
ACATGTACTTTTGTACTACTGCCACCGCCCAATTCCACTTCCAATATCGC
CGGCAATCCCCAACTTCCAAGATTTGCAGTGGTTTTATTGTTGTTGTTTG
AAGTGCTTAAATAACCACGTGAACACGTGGGACTGGTTTGCTTTTTTTCA
AGTCGGGTGTTTGCGAGGTAATCCGTGTTTGACGTTTTGACGTGACACGC
GGCAGCACCCATTGCCCGTTCGACCAACTACTGCTGTCTCGTTGTTGTAG
CACACGAATGTTGCCGGGCGACGAATCTCGAACACCGCTGACTCCTGCAG
ATGACTAGCTGCTGCGAGACGGAAGGATGTGCACTTGTAGCAGCTGCCGC
CCTAGCATTTGCGTATATGATGCGACGAGGCGGGCGGCATGACGATGATC
GCTTGACGACAACAGTAGACTACAGTCAGTCCTTCGTCATGACCGATTTT
GTACGCCGTGGCTCCAAATGCTCATTCTCTACTTACAGTCAGTCCTTCGT
CATGACCGATTTTGTACGCCGTGGCTCCAAATGCTCATTCTCACGTAAGA
ACTGTTCCGAACATGTTGTCGCAGCGGAAAATCTGACGCGCACATGGTGT
GCGCTGCGTGAAATAACTTTTTTTCTATAGTGTATTTTGGCAGCCTGGAA
GACGAAGACCCTTGGATGGCCCGACTGTGACGGACCGCGGACGTCGACGC
ATTTCTCGACGCAAGTCAGCTCTACCCTGGGCAAACTCCCCTTGATTTTG
CCGCATGGAGATACGATTGAACGGAAAATCAAGACCCATCTCTTGTACAT
GCTTTGTTTCGACGCTCAAGACACGCAAGTAGACGCTACATGTATCCAGC
TTGTACGTGCGCAATCGAAACGCCGAATATACCGCCAAACAATATCCTGA
CACGCTGCCATCGCCACCCCGTGGTTACGCTGCTCCGCACATACCTATGT
ACCAATAGGGACCCCGGTTACCGCCCAAGCACGAGGCTAGATACCTCACG
GCGTTTGAGGAGCTCATGCTGAGGTGGAAGGACAGTGATGTGGAGTTTTT
TGTGCCGCAGCTTGCGGCGGTGTTGATGTCCAAGGGGGTTCCTTCTAGGA
ACGTGCATGTGAGTGTACATCGGTGTCCGGGAGTTGCAGGTAGGAGGGGG
AAGACACATGGCACGGGGGGCTTCGATGCAATAGCAGCGGAGCCCTTGCG
TGTGTGTCTGCTGGGATGACTACTGGGGTTTTCTTGCAGATACCTTGACC
ATGAGCGGCCACGCCCAAGGACGTTTGGAAGATGGCCCACGTGAGGAGCA
CGCGACATCAATGCTCGTCGCCGTCAACAGTCCGCAAGGATAAATATATT
ACCAACGTTCCAGCAGCAAGCTGCTTTTCCTGAACGCCGCGAATGCTTGC
CTCACTGCTGCACCGCGCCCACGTGTTGGCAATCGACTGCTGTCGCAGAT
TACACAATTAGTAGTGGGGAGACTGTCGGCGAACTTGCAGCAGCGGTGCT
TCGGCAACATAGGCTTGGCTGTCCAGATGATGTGGCAGTTCGAGGCGGTG
GGGCGACGGCCCCAGGAGGATGGGCCATCTTGGAACGCCTTCAAAAATGT
AGGGGAACACCCTGTGTGATACTAGAATCTAAAAAGTAGTGTTTTTACAG
GAGATTTTGTGAGAGAAGGGTTGTACTGCCGTGACTATCGTTGCCTTTTG
ATCAGTGTTTGACACGGCATGTAGGAAAGCCTGTGGGCATGTTCTGTTGC
AGAGAAGCTTAGGATGCGCGGTAGGCACGAGCGTACAGGTCCAAACTCCA
GAAAATTCTCTTATGCATCCAACAATCGGTTTGACATCGCTTTGCCTATT
TTTCGCTCTCCGGGTTGTATGCGCGCGCTCCCGGGTTGCTGCTGATGCCG
CTGCTGCTGCTGCGTCTGTTGGTTTGAACGAATCAGAGTTACGTTCTAGC
TGCCTTGAATGGAGACAACCTACCGGAGCAGCTGAGGATGCAGCGGCGGG
CATATTGCGCCGACTCGATGGCCTTTGTTGACACGCTCATGGACATCGGC
CATTCGTAAGTTGTTGTTGTCATCGTTGAGGTATCTTTGTTGTTGCTGCT
GCTGCTGTGTGTGGCGCTGTGGATGGGTTGACATTCACACCGGGTTTGGC
GTCTCTGAGATATAACAGTTTAGCTCACAAAGCATTCGTCTTTCTTATTG
ACTGCGTGGACATCCCGCCACCACTCAATGCAAAGTAAGGCGCAACCACC
TCAACACCGATTGCTGCCTGTGGCCACCCGTGTTACCGATCGTCGCCTAT
GCGGAGAATGCGATACTCTTCGAGAAGCAAGCCGAACCTCATTGTGCCTC
TCCCGTGTCGCCAGGCTCAAGAAGTTACCAATCAAGCGTCGATTAAGCGC
TCTGGACAACGAGCTCGGGAGGGTAAACCGTATGCTCCTGCGGAGAATGC
AGACCAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14384:20..2877-

>mRNA_Ecto-sp13_S_contig14384.3378.1 ID=mRNA_Ecto-sp13_S_contig14384.3378.1|Name=mRNA_Ecto-sp13_S_contig14384.3378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=630bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14384:20..2877- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCAGGCGTGGCCTGGAGGATGATTATCCAAGCAGGAAATGCTGTGGC
AGCATGGATTTACCTCTGGATGACCTTCCAGCTTGGCTTCTACGAGTCGA
CGGACCTCCTCCCACGAGGACCCCGGTTACCGCCCAAGCACGAGGCTAGA
TACCTCACGGCGTTTGAGGAGCTCATGCTGAGGTGGAAGGACAGTGATGT
GGAGTTTTTTGTGCCGCAGCTTGCGGCGGTGTTGATGTCCAAGGGGGTTC
CTTCTAGGAACGTGCATATTACACAATTAGTAGTGGGGAGACTGTCGGCG
AACTTGCAGCAGCGGTGCTTCGGCAACATAGGCTTGGCTGTCCAGATGAT
GTGGCAGTTCGAGGCGGTGGGGCGACGGCCCCAGGAGGATGGGCCATCTT
GGAACGCCTTCAAAAATAGTTACGTTCTAGCTGCCTTGAATGGAGACAAC
CTACCGGAGCAGCTGAGGATGCAGCGGCGGGCATATTGCGCCGACTCGAT
GGCCTTTGTTGACACGCTCATGGACATCGGCCATTCGCTCAAGAAGTTAC
CAATCAAGCGTCGATTAAGCGCTCTGGACAACGAGCTCGGGAGGGTAAAC
CGTATGCTCCTGCGGAGAATGCAGACCAGG
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