mRNA_Ecto-sp13_S_contig1438.3374.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1438.3374.1
Unique NamemRNA_Ecto-sp13_S_contig1438.3374.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: D8LBA4_ECTSI (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA4_ECTSI)

HSP 1 Score: 1019 bits (2635), Expect = 0.000e+0
Identity = 559/581 (96.21%), Postives = 562/581 (96.73%), Query Frame = 1 
Query:    1 MASSVAVASPSTSRSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPVAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-MQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            MASSVAVASPSTSRSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSP AASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKG+AQEEKGVE SFDEYESVNHSEAA AMAAAEGDKENA+AASVVGSKRKSSP GDQVAATGV TP A XXXXXXXXXXXXXXXXXXXXXXXXXX          E MQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECI+KIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQ CGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV
Sbjct:    1 MASSVAVASPSTSRSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPAAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGEAQEEKGVELSFDEYESVNHSEAAAAMAAAEGDKENASAASVVGSKRKSSPDGDQVAATGVETPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAEGGPGNEEEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIQKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 581
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: A0A835Z035_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z035_9STRA)

HSP 1 Score: 649 bits (1674), Expect = 1.460e-224
Identity = 339/568 (59.68%), Postives = 393/568 (69.19%), Query Frame = 1 
Query:   40 RSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPV-AASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            R FVV+VAATAGSLGIGK G +PW+LA DMAYFK+ TS    +           K+NAV+MGRKTW+SIP+RFRPL GR NVVL+RNP AR  L LP DV++A SL +AL  LS      +V K+FVIGGG VY EA+  E C++V LT+V  PADG+  +CDT FP LDP +FKLV +G  Q E G+++ F+ YE  + S      A A G   +  A +   S       G  +A                                              E QYL+LV+DI+DNG  RGDRTGTGTLSKFG QMRFSLR  RFPLLTTKRVFWRGVAEELLWFVAGCT+A  L+ + IHIWDGNGSR FLD  GL  REEGDLGPVYGFQWRHFGA+Y D   DY G+GVDQLA+CI KIK +P+DRRI++SAWNP DL  MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASY+LLT +VAQ CGLK GDF+HTIGDAHVYVNHVDALREQ+KR PRPFP L ++   TDIDSFE K   ++GY+P   IKM+MAV
Sbjct:    6 RDFVVVVAATAGSLGIGKGGGIPWKLAGDMAYFKKVTSACDIAG----------KVNAVVMGRKTWESIPQRFRPLPGRCNVVLTRNPRARQELVLPDDVIIARSLEDALSCLSTQDMRDKVHKIFVIGGGQVYKEALGMEQCKQVHLTTVEAPADGKQFECDTFFPPLDPASFKLVSRGDKQSENGIDYRFNVYERQDSS-----AAPASGSFSSVGATNGSRSSSAKDTSGAAIA----------------------------------------EEPNDEERQYLDLVQDIIDNGALRGDRTGTGTLSKFGAQMRFSLRGGRFPLLTTKRVFWRGVAEELLWFVAGCTDAGALQAKNIHIWDGNGSRAFLDSRGLEHREEGDLGPVYGFQWRHFGAKYVDFRTDYKGQGVDQLADCIHKIKNSPDDRRIIMSAWNPCDLELMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTCMVAQVCGLKPGDFIHTIGDAHVYVNHVDALREQIKRVPRPFPKLRLHPARTDIDSFEMKDFTLEGYNPMNAIKMQMAV 518
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: A0A4D9D1L8_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L8_9STRA)

HSP 1 Score: 612 bits (1577), Expect = 8.580e-210
Identity = 328/573 (57.24%), Postives = 383/573 (66.84%), Query Frame = 1 
Query:   40 RSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKR---CTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPVA-ASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPP--ADGRFDDCDTHFPALDPDTFKLVKKGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            R F ++VAATA + GIGK G LPW L  DM +FKR   CTS P             DKINAVIMGR+TWQSIPE+FRPL  R NVVLSRNP  R+ L LP+ V +A SL  AL LL+    AS V+KVFVIGG +VY EAV SE CE +  TS+     A   F DCD HFP +    + LV       +  + F F  YE ++   +A +                 G  + S   G+Q                                                E QYL LV++I+++G RRGDRT TGTLSKFG Q+RFSLR+E FPLLTTKRVFWRGVAEELLWF++G T+AN LKE+ I IWDGN SRE+LD LGL+ REEGDLGPVYGFQWRHFGAEY+DMHADYTGKG+DQLA  I  IK NPEDRRI++SAWNPADLGKMALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASYALLTRLVAQ CGLKAG+F+HTIGDAHVY+NHVDAL+EQL R PR FP L IN  +  IDSF ++   ++GY P++++KMKMAV
Sbjct:   26 RGFTIVVAATAKTFGIGKAGQLPWNLPQDMEHFKRLTACTSVP-------------DKINAVIMGRRTWQSIPEKFRPLRNRLNVVLSRNPGIREQLNLPQGVRVATSLKAALALLAHGNDASVVEKVFVIGGAAVYREAVISEACEAIEFTSIEEKRGATPLFADCDAHFPVIPATEYCLVSSTPVLSQNALRFRFQRYERLDRGPSADSPVGG-------------GPSKVSGAAGNQ-----------------------------------------------EEAQYLRLVQEIIEHGKRRGDRTQTGTLSKFGAQLRFSLRDETFPLLTTKRVFWRGVAEELLWFISGSTDANYLKEKKIGIWDGNSSREYLDKLGLSHREEGDLGPVYGFQWRHFGAEYSDMHADYTGKGIDQLARAITTIKDNPEDRRIIVSAWNPADLGKMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQVCGLKAGEFIHTIGDAHVYLNHVDALKEQLTRTPRSFPKLRINPAKKHIDSFTFEDFTIEGYLPHESLKMKMAV 525
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: A0A7S2WWT1_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWT1_9STRA)

HSP 1 Score: 606 bits (1563), Expect = 3.200e-207
Identity = 330/574 (57.49%), Postives = 380/574 (66.20%), Query Frame = 1 
Query:   46 FVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLL-SPVAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTP--------VAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            F +IVAATA SLGIG+ G LPWRL  DMA+FKR T     S+G         + NAVIMGRKT+QSIP RFRPL GR NVV+SRNP  R  L LP +VL+A SL +ALD L S      V +V+VIGGGS+Y EAVA E C  +L+T V       F+DCDTHFPA+D   F L+       +KGV  SF+ +E V                 N  A+ V G                             A                                     EMQYL L++DI+DNGV RGDRTGTGT+SKFG QMRFSLR + FPLLTTK+VFWRGVAEELLWFV+G TNA +L+++ I IWDGN SREFLDG GL  REEGDLGPVYGFQWRHFGA Y DMHA+Y GKGVDQL + I  IK+ P DRRI++SAWNPADL  MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASY+LLTR++AQ CGLKAGDF+HTIGDAHVY+NHVDALREQL R PRPFP L IN D+++IDSF++    V+GY P+ TIKMKMAV
Sbjct:    5 FDIIVAATASSLGIGRQGKLPWRLGVDMAFFKRAT----LSAGLPG------QSNAVIMGRKTYQSIPARFRPLNGRVNVVISRNPEIRAELDLPAEVLVASSLDDALDQLGSSKVGQAVSQVYVIGGGSIYDEAVAHEACRHLLVTMVHSE---EFEDCDTHFPAIDTARFSLLSSSAPFTDKGVVCSFNVFERVGSLRCFA----------NGPASPVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXATAEAPQLTPSEILDGLLEKPVEVPRGPGVNLVGSMAPHPEMQYLALIQDIIDNGVVRGDRTGTGTVSKFGAQMRFSLRGDEFPLLTTKKVFWRGVAEELLWFVSGSTNAKLLQDKKIKIWDGNASREFLDGRGLHHREEGDLGPVYGFQWRHFGARYEDMHANYDGKGVDQLMQAINTIKSRPNDRRIIVSAWNPADLDLMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTRMMAQVCGLKAGDFIHTIGDAHVYLNHVDALREQLARAPRPFPKLRINPDKSEIDSFDFSDFTVEGYKPHGTIKMKMAV 555
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: A0A7S2MDM9_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDM9_9STRA)

HSP 1 Score: 592 bits (1527), Expect = 4.630e-202
Identity = 322/569 (56.59%), Postives = 381/569 (66.96%), Query Frame = 1 
Query:   40 RSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPVAASE-VDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVK-KGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            R+F VIVAATA + GIG+ G LPW++  DMA+FKR T T                +NAVIMGRKT+QSIP RFRPL GR NVV+SRNP  R  L LP DVL+AGSL++AL ++     ++ V +VFVIGGGS+Y EAV S+LC +V++T+V       F+DCD  FP+L  D + L          + +  +F+ +E +               KE+         +                     XX                                  EMQYLNL+ DI+D+GV+RGDRTGTGTLSKFGVQMRFSLR    PLLTTKRVFWRGVAEELLWFV+G TNA  L+++ I IWDGNGSREFLD  GL  REEGDLGPVYGFQWRHFGA+YTDMHADY+G+GVDQLA+ I  IK NP DRRI++SAWNPA L +MALPPCHMFCQFYVA+G LSCQMYQRSADMGLGVPFNIASYALLTRLVA+ C L AG+F+HTIGDAHVY+NHVDALR QL R PRPFP L IN ++ DIDSF Y+ L V+GYSP+ TIKMKMAV
Sbjct:    2 RTFDVIVAATASTFGIGRRGRLPWKIGVDMAFFKRATLTCDMDG----------MMNAVIMGRKTYQSIPARFRPLQGRVNVVISRNPNLRQELELPDDVLVAGSLSDALAMIGEGTLNDRVSEVFVIGGGSIYEEAVKSQLCSRVVMTTVHSTG---FEDCDVSFPSLPSDEYILTSASAPVTTSEELVVNFNVFERIKKKT-----------KED---------EXXXXXXXXXXXXXXXXXXXXXXXELNALLKTSQAPMTSQLLPPSSASTLVESMAAHEEMQYLNLIRDIIDHGVQRGDRTGTGTLSKFGVQMRFSLRNNVLPLLTTKRVFWRGVAEELLWFVSGSTNAKDLQDKNIRIWDGNGSREFLDSRGLGHREEGDLGPVYGFQWRHFGAQYTDMHADYSGQGVDQLAKAIDAIKNNPTDRRILVSAWNPAALDEMALPPCHMFCQFYVADGALSCQMYQRSADMGLGVPFNIASYALLTRLVARVCDLDAGEFIHTIGDAHVYLNHVDALRTQLTRIPRPFPRLVINEEKRDIDSFSYEDLTVEGYSPHGTIKMKMAV 537
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: F0YJX9_AURAN (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJX9_AURAN)

HSP 1 Score: 585 bits (1507), Expect = 1.870e-199
Identity = 317/562 (56.41%), Postives = 369/562 (65.66%), Query Frame = 1 
Query:   55 IVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPVAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            IVAA AGS GIGK+G LPW+LA DM YFK+ TS                K NA +MGRKTW SIP +FRPL GR+NVVLSRNP AR+ L LP DV +  SL  A+D L+  A  ++ +VFVIGGG VYA A+A   C KVLLTS+   A G F DCD  FP      F     G+A  E GV + F   E++        +      + N   A    +++ ++P  +                                                 E QYL+L+ +ILD GVRRGDRTGTGT+S FG +M FSLR +RFPLLTTKRVFWRGVAEEL+WFV+G TN  +L ++GIHIWDGNGSREFLD  GL  REE DLGPVYGFQWRHFGA+Y DMH DY G+GVDQLA C++ IK +P  RRIVLSAWNPADL +MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASYALLTR+VAQ  GLK GDFVH IGDAHVY NHVDAL+ QL+R+PRPFPTL+IN  +T ID FE+    V+GY PY  I MKMAV
Sbjct:   20 IVAAVAGSYGIGKDGTLPWKLAGDMKYFKKVTSAAPEG-----------KTNACVMGRKTWLSIPPKFRPLGGRKNVVLSRNPNAREELGLPPDVFVCPSLDAAVDALAGEA--DLGEVFVIGGGQVYASALADARCTKVLLTSIDDAA-GAFADCDAVFPDPAKAGFASAASGEALVENGVAYRF---ETLTRPAKKPPLR-----ESNGPPAPPPANEKPAAPNHE-------------------------------------------------EKQYLDLIAEILDRGVRRGDRTGTGTISIFGARMSFSLRNDRFPLLTTKRVFWRGVAEELVWFVSGSTNGKLLADKGIHIWDGNGSREFLDRRGLGHREEMDLGPVYGFQWRHFGAKYVDMHKDYAGEGVDQLAACVETIKQDPNSRRIVLSAWNPADLDEMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTRMVAQATGLKPGDFVHVIGDAHVYSNHVDALKVQLQREPRPFPTLTINPAKTGIDDFEFADFTVEGYKPYPKIDMKMAV 510
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: A0A7R9UC25_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC25_9STRA)

HSP 1 Score: 581 bits (1497), Expect = 2.200e-197
Identity = 315/573 (54.97%), Postives = 386/573 (67.36%), Query Frame = 1 
Query:   40 RSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLR--LPKDVLLAGSLTEALDLLSP--VAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDD--CDTHFPALDPDTFKLVKKGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            R FVV+VAATA SLGIGK+G LPWR+  DM++FK+ TS  T   G           NAVIMGRKTW+SIP +FRPL+GR N+VLSR+P   ++LR  LP+ V +A SL EAL +++P  +   +V+ VFVIGGGSVYA+A+ S  C++++LT VT P +G  +D  CDT  P +D   +  V +   Q ++   +SF  YE       A   AA +G  +  A                Q  A     P  A                                    E QYL+LV DI+++GV RGDRTGTGTLSKFGVQMRFSLR+  FPLLTTKRVFWRG+AEELLWF+ GCTNANVL E+ IHIWDGNGSREFLD  GLT+RE GDLGPVYGFQWRHFGA+Y DMHADY G+GVDQL + I  +K NPE RR +L+AWNP+DL KMALPPCHM  QFYVA+GELSC +YQRS DMGLGVPFNIASYALLTR++AQ  GL+ GDFVH IGDAHVY+NHV+ L+EQL+R+P PFPTL +N+ +TDIDSFE+    +  Y  ++ +KM MAV
Sbjct:   46 RHFVVVVAATASSLGIGKDGKLPWRIRGDMSFFKKLTSE-TRIPGHR---------NAVIMGRKTWESIPSKFRPLSGRLNIVLSRHP---ESLRGQLPEQVAVASSLEEALAMVAPGGIHCDQVEDVFVIGGGSVYADALRSSYCKRIVLTEVT-PLEGTEEDLGCDTFLPRIDGSAYMRVAESGDQVDENFRYSFVTYERR-----ATGAAATDGPPQAQA----------------QPQAQARTNPDHA------------------------------------EWQYLDLVRDIIESGVERGDRTGTGTLSKFGVQMRFSLRDGSFPLLTTKRVFWRGLAEELLWFIQGCTNANVLAEKNIHIWDGNGSREFLDKRGLTDREVGDLGPVYGFQWRHFGAQYRDMHADYAGEGVDQLRQIISDLKANPESRRHILTAWNPSDLPKMALPPCHMMAQFYVADGELSCLLYQRSGDMGLGVPFNIASYALLTRIIAQVTGLQPGDFVHCIGDAHVYLNHVEPLKEQLRREPLPFPTLEVNSKKTDIDSFEFSDFVLHNYRHHRGVKMDMAV 547
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: A0A8J2SV63_9STRA (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SV63_9STRA)

HSP 1 Score: 576 bits (1484), Expect = 4.970e-196
Identity = 317/562 (56.41%), Postives = 369/562 (65.66%), Query Frame = 1 
Query:   55 IVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPVAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGKAQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            IVAATA  +GIG++GALPWRL  DMAYFKR T+    S             NAV+MGRKTW SIP++FRPL GR NVVLSRNP AR+ L LP+DV    SL  AL  +   A  +V KVFVIGGG +Y  AV    C +VLLT V  P  G    CD  FP L    F  V     ++E  + +SF   +++    ++  +    GD  N+    +V       P   +                                                E QYL+L+ +ILD+GV RGDRTGTGT S FG +M+FSLR++ FPLLTTKRVFWRGVAEELLWFV+G TN  +L+E+ IHIWDGNGSREFLD  GL  REE DLGPVYGFQWRHFGA Y DMHADY GKGVDQLAECI++IK +P  RRIVLSAWNPADL +MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASYALLTR+VAQ+  LKAGDFVH IGDAHVY+NH+DAL EQLKR PRPFP+L+IN  + DID+FEY    V GY PY  I+M+MAV
Sbjct:   16 IVAATA-QMGIGRDGALPWRLKGDMAYFKRVTTEAPASQQ-----------NAVVMGRKTWLSIPKKFRPLPGRANVVLSRNPDAREQLDLPEDVACYASLDAALTQMK--AREDVAKVFVIGGGELYKAAVNDARCTEVLLTRVEDPK-GVLPQCDAFFPDLTGTGFTTVAMSPPEKEGDLAYSF---QTLTRECSSTKL----GDVTNSLKEKLVEKPPPVPPVNKE------------------------------------------------EQQYLDLIREILDSGVVRGDRTGTGTKSIFGARMKFSLRDDVFPLLTTKRVFWRGVAEELLWFVSGATNGKLLQEKNIHIWDGNGSREFLDKRGLPHREEMDLGPVYGFQWRHFGASYEDMHADYAGKGVDQLAECIRQIKGDPNSRRIVLSAWNPADLPEMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTRMVAQSTNLKAGDFVHVIGDAHVYLNHIDALEEQLKRAPRPFPSLTINAAKKDIDAFEYDDFTVDGYKPYPKIQMEMAV 507
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: A0A7S1GYM3_HEMAN (Bifunctional dihydrofolate reductase-thymidylate synthase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GYM3_HEMAN)

HSP 1 Score: 568 bits (1463), Expect = 2.470e-192
Identity = 322/571 (56.39%), Postives = 377/571 (66.02%), Query Frame = 1 
Query:   46 FVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLRLPKDVLLAGSLTEALDLLSPVAASEVDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGK----AQEEKGVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVA--EGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            F +IVA T    GIG    LPWR+  DMAYFKR T     ++          K NAVIMGRKTW+SIP +FRPL  R N+VL+RNP   + L LP  V+   SL  AL  +S    S+V + FVIGGG VYAEA++   C+KV  T V     G + +CDT FPA+ P  F+L    +     +EEKG++F   E++ + +++AA     A+G K+        G+KRK   G       G G   AA                                    E QYL+L+ DILDNG+R+GDRTGTGT+SKFG QMRF LR   FPLLTTKRVFWRGVAEELLWF++G TNAN L+++ IHIWDGNGS+EFL  LGL  REEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLA+ I  IKTNP DRRI+LSAWNPADLG MALPPCHMFCQFYV    GELSCQMYQRS DMGLGVPFNIASYALLT LVAQ C LK GDFVH +GDAHVY NHV+AL+ QLKR+PR FPTL IN    DID F+++  E+KGY P+  I M MAV
Sbjct:   42 FSIIVATTKDG-GIGVKNNLPWRIPEDMAYFKRVTMDTGDTTNT--------KTNAVIMGRKTWESIPPKFRPLNDRLNIVLTRNP---ENLPLPDGVICCDSLASALSAVSD--RSDVARCFVIGGGQVYAEAISLPTCDKVYRTMVH----GDY-ECDTFFPAI-PAHFELDTASQPLNCVREEKGIKF---EFQVLTNTKAAPPSPPADGAKD--------GNKRKLGGGSG-----GEGQSKAARHE---------------------------------EHQYLDLIRDILDNGIRKGDRTGTGTISKFGAQMRFDLRTS-FPLLTTKRVFWRGVAEELLWFISGSTNANELRDKNIHIWDGNGSKEFLSNLGLGHREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAQVIHTIKTNPNDRRILLSAWNPADLGIMALPPCHMFCQFYVDTDRGELSCQMYQRSCDMGLGVPFNIASYALLTCLVAQVCNLKPGDFVHCLGDAHVYSNHVEALKVQLKREPRSFPTLKINPSVKDIDGFKFQDFELKGYEPHAKIAMDMAV 542
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Match: C1MMA6_MICPC (Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MMA6_MICPC)

HSP 1 Score: 563 bits (1452), Expect = 6.030e-191
Identity = 321/591 (54.31%), Postives = 376/591 (63.62%), Query Frame = 1 
Query:   22 ASPSTSRSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCTSTPTTSSGXXXXXXXTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRNPAARDTLR--------------LPKDVLLAGSLTEALDLLSPVAASE-VDKVFVIGGGSVYAEAVASELCEKVLLTSVTPPAD--GRFDDCDTHFPALDPDTFKLVKKGKAQEEK-GVEFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAATGVGTPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 1740
            AS  T+R F V+VAAT G +GIG +GALPWRL  DMAYFK  T+T               K NAVIMGRKTW+SIP +FRPL GR NVVLS++ A  ++                LP  VLL  SL  AL  L     +E V+K+FV+GG  VYAEA+AS  C+ V +T VTPP D    F  CDTH P +D + FKL        EK G +  F  Y         VA  AA G      + S+        PG     A GV                                          E+QYL+L+ DI+++G  +GDRTGTGT+SKFG  MRF LR   FPLLTTKRVFWRGVAEELLWFV G TNA  L+++ IHIWDGNGSRE+LD +GL+ REE DLGPVYGFQWRHFGAEYTDMHA+Y GKGVDQLAE I KIK NP DRRI+L+AWNPA L +MALPPCHMFCQFYVA GELSCQMYQRS DMGLGVPFNIASY+LLT ++AQ CGLK GDFVH +GD HVY NHV+ L++QL  +PRPFPTL IN  +TDIDSFE+    ++GY P+  I+MKMAV
Sbjct:    4 ASAPTTRPFQVVVAATKGDMGIGLDGALPWRLPKDMAYFKSVTATVAEPG----------KRNAVIMGRKTWESIPAKFRPLPGRLNVVLSKSGALVESTGSENAAPANGTPSNVLPPSVLLQPSLEAALATLGAGEHAENVEKIFVVGGAQVYAEAMASPACQAVHITEVTPPKDTPDAF-KCDTHMPPVDMEKFKLYASAPPVNEKEGAKIQFLSY---------VAKDAATGKFRIPGSVSLP-------PG---AVANGV---------------------------------------RHEELQYLDLIRDIIESGNVKGDRTGTGTISKFGTSMRFDLRRS-FPLLTTKRVFWRGVAEELLWFVGGRTNAKELQDKDIHIWDGNGSREYLDSVGLSHREEQDLGPVYGFQWRHFGAEYTDMHANYDGKGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQMYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHVMGDTHVYSNHVEPLKKQLLCEPRPFPTLKINPAKTDIDSFEFSDFTIEGYDPHPKIEMKMAV 524
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1438.3374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA4_ECTSI0.000e+096.21Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A835Z035_9STRA1.460e-22459.68Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A4D9D1L8_9STRA8.580e-21057.24Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7S2WWT1_9STRA3.200e-20757.49Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7S2MDM9_9STRA4.630e-20256.59Bifunctional dihydrofolate reductase-thymidylate s... [more]
F0YJX9_AURAN1.870e-19956.41Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7R9UC25_9STRA2.200e-19754.97Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A8J2SV63_9STRA4.970e-19656.41Bifunctional dihydrofolate reductase-thymidylate s... [more]
A0A7S1GYM3_HEMAN2.470e-19256.39Bifunctional dihydrofolate reductase-thymidylate s... [more]
C1MMA6_MICPC6.030e-19154.31Bifunctional dihydrofolate reductase-thymidylate s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1438contigEcto-sp13_S_contig1438:1557..7451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1021.5
Seed ortholog evalue1.5e-295
Seed eggNOG ortholog2880.D8LBA4
Preferred nameTYMS
Model size2416
KEGG rclassRC00109,RC00110,RC00158,RC00219,RC00332
KEGG koko:K00287,ko:K00560,ko:K13998
KEGG ReactionR00936,R00937,R00939,R00940,R02101,R02235,R02236,R11765
KEGG Pathwayko00240,ko00670,ko00790,ko01100,ko01523,map00240,map00670,map00790,map01100,map01523
KEGG ModuleM00053,M00126,M00840,M00841
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000083,GO:0000166,GO:0000278,GO:0000900,GO:0001101,GO:0001501,GO:0001889,GO:0002064,GO:0002065,GO:0002066,GO:0002069,GO:0002070,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004146,GO:0004633,GO:0004799,GO:0004857,GO:0005488,GO:0005515,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006231,GO:0006259,GO:0006355,GO:0006417,GO:0006575,GO:0006725,GO:0006729,GO:0006730,GO:0006732,GO:0006753,GO:0006760,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007049,GO:0007275,GO:0007399,GO:0007568,GO:0007584,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009059,GO:0009108,GO:0009112,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009150,GO:0009152,GO:0009157,GO:0009162,GO:0009163,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009256,GO:0009257,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009396,GO:0009605,GO:0009611,GO:0009636,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010181,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0014070,GO:0015936,GO:0015937,GO:0015949,GO:0016020,GO:0016032,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016740,GO:0016741,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0017148,GO:0018130,GO:0019048,GO:0019087,GO:0019088,GO:0019208,GO:0019212,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0019751,GO:0019752,GO:0019842,GO:0019860,GO:0019866,GO:0020021,GO:0021700,GO:0022008,GO:0022402,GO:0023051,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030371,GO:0030855,GO:0031090,GO:0031099,GO:0031100,GO:0031102,GO:0031103,GO:0031175,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0031427,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032553,GO:0032570,GO:0032768,GO:0032770,GO:0033189,GO:0033218,GO:0033273,GO:0033554,GO:0033560,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034097,GO:0034248,GO:0034249,GO:0034311,GO:0034312,GO:0034399,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0035094,GO:0035295,GO:0035821,GO:0035999,GO:0036094,GO:0040007,GO:0042083,GO:0042221,GO:0042398,GO:0042493,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044003,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045182,GO:0045471,GO:0046073,GO:0046078,GO:0046104,GO:0046105,GO:0046120,GO:0046125,GO:0046126,GO:0046134,GO:0046146,GO:0046165,GO:0046173,GO:0046385,GO:0046390,GO:0046394,GO:0046452,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046677,GO:0046683,GO:0046983,GO:0048037,GO:0048468,GO:0048469,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048545,GO:0048565,GO:0048583,GO:0048589,GO:0048666,GO:0048678,GO:0048699,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0050999,GO:0051000,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051216,GO:0051246,GO:0051248,GO:0051252,GO:0051341,GO:0051353,GO:0051384,GO:0051593,GO:0051701,GO:0051704,GO:0051716,GO:0051817,GO:0051870,GO:0051871,GO:0055086,GO:0055114,GO:0055123,GO:0060255,GO:0060429,GO:0060574,GO:0060575,GO:0060576,GO:0061008,GO:0061448,GO:0061564,GO:0065007,GO:0065009,GO:0070013,GO:0070402,GO:0071695,GO:0071704,GO:0071840,GO:0071897,GO:0072341,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0080134,GO:0080135,GO:0090079,GO:0090304,GO:0090322,GO:0090407,GO:0097159,GO:0097305,GO:0097327,GO:0097329,GO:0097367,GO:0097421,GO:0098772,GO:0120036,GO:1900407,GO:1901031,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1902882,GO:1903047,GO:1903506,GO:1990825,GO:2000112,GO:2000113,GO:2000121,GO:2000377,GO:2001141
Exons4
EggNOG free text desc.thymidylate synthase activity
EggNOG OGsCOG0207@1,COG0262@1,KOG0673@2759,KOG1324@2759
Ec32 ortholog descriptionDihydrofolate reductase domain
Ec32 orthologEc-27_004630.1
EC1.5.1.3,2.1.1.45
Cds size1743
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462767.6910398-CDS-Ecto-sp13_S_contig1438:1556..27161681462767.6910398-CDS-Ecto-sp13_S_contig1438:1556..2716Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1438 1557..2716 +
1681462767.7042997-CDS-Ecto-sp13_S_contig1438:4905..50521681462767.7042997-CDS-Ecto-sp13_S_contig1438:4905..5052Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1438 4906..5052 +
1681462767.7143106-CDS-Ecto-sp13_S_contig1438:5521..57321681462767.7143106-CDS-Ecto-sp13_S_contig1438:5521..5732Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1438 5522..5732 +
1681462767.72291-CDS-Ecto-sp13_S_contig1438:6553..67781681462767.72291-CDS-Ecto-sp13_S_contig1438:6553..6778Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1438 6554..6778 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462767.7326298-UTR-Ecto-sp13_S_contig1438:6778..74511681462767.7326298-UTR-Ecto-sp13_S_contig1438:6778..7451Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1438 6779..7451 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1438.3374.1prot_Ecto-sp13_S_contig1438.3374.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1438 1557..6778 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1438.3374.1

>prot_Ecto-sp13_S_contig1438.3374.1 ID=prot_Ecto-sp13_S_contig1438.3374.1|Name=mRNA_Ecto-sp13_S_contig1438.3374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=581bp
MASSVAVASPSTSRSFVVIVAATAGSLGIGKNGALPWRLAADMAYFKRCT
STPTTSSGTTTATTTTDKINAVIMGRKTWQSIPERFRPLAGRRNVVLSRN
PAARDTLRLPKDVLLAGSLTEALDLLSPVAASEVDKVFVIGGGSVYAEAV
ASELCEKVLLTSVTPPADGRFDDCDTHFPALDPDTFKLVKKGKAQEEKGV
EFSFDEYESVNHSEAAVAMAAAEGDKENAAAASVVGSKRKSSPGGDQVAA
TGVGTPVAAAAGADGAISDAAAAAGSASTAPAPQEEAEGGPGNEEEMQYL
NLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRG
VAEELLWFVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGP
VYGFQWRHFGAEYTDMHADYTGKGVDQLAECIKKIKTNPEDRRIVLSAWN
PADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALL
TRLVAQTCGLKAGDFVHTIGDAHVYVNHVDALREQLKRKPRPFPTLSINT
DETDIDSFEYKHLEVKGYSPYKTIKMKMAV*
back to top

mRNA from alignment at Ecto-sp13_S_contig1438:1557..7451+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1438.3374.1 ID=mRNA_Ecto-sp13_S_contig1438.3374.1|Name=mRNA_Ecto-sp13_S_contig1438.3374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5895bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1438:1557..7451+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTTCCTCTGTTGCGGTCGCCTCTCCTTCCACCTCGCGCTCCTTTGT
CGTCATCGTCGCCGCCACCGCCGGCTCCCTCGGCATCGGCAAGAACGGCG
CGCTTCCCTGGCGCCTGGCCGCCGACATGGCCTACTTCAAGCGCTGCACT
TCCACCCCCACAACGAGCAGCGGCACCACCACTGCCACCACCACCACTGA
CAAGATCAACGCCGTGATCATGGGCCGCAAGACCTGGCAGTCCATCCCCG
AGCGATTTCGCCCCCTCGCGGGCCGCCGCAACGTCGTGCTCAGCCGCAAC
CCCGCGGCCAGAGATACCCTCCGCCTCCCTAAGGACGTGCTCCTGGCCGG
CAGCCTCACCGAGGCCTTGGATCTCCTCTCTCCCGTTGCCGCCTCTGAGG
TGGATAAGGTATTCGTTATCGGCGGGGGCTCGGTCTACGCAGAGGCCGTG
GCGTCGGAGCTTTGCGAGAAGGTGCTGCTGACCTCGGTGACCCCGCCGGC
GGACGGGCGCTTCGACGACTGCGACACCCACTTCCCGGCCCTCGACCCGG
ACACGTTCAAGCTCGTCAAGAAGGGCAAGGCACAGGAGGAGAAAGGGGTC
GAATTCTCCTTCGACGAGTACGAGAGCGTCAACCACTCGGAGGCGGCGGT
GGCGATGGCTGCGGCCGAGGGGGACAAGGAGAACGCAGCCGCAGCAAGCG
TCGTAGGATCCAAGCGCAAGTCTTCTCCCGGCGGAGATCAGGTTGCCGCA
ACCGGCGTTGGAACGCCCGTGGCGGCGGCGGCAGGCGCCGACGGCGCTAT
CTCAGACGCAGCGGCAGCAGCAGGCTCGGCCTCGACAGCACCGGCGCCCC
AGGAGGAGGCGGAGGGCGGTCCGGGGAACGAGGAAGAGATGCAGTACCTC
AACCTGGTGGAGGACATCCTGGACAACGGCGTCCGCAGGGGGGACCGCAC
GGGGACGGGAACGCTGTCGAAGTTTGGCGTGCAGATGCGCTTCAGCCTCA
GGGAAGAGCGCTTCCCGCTGCTAACCACCAAGCGCGTGTTCTGGCGCGGC
GTGGCGGAGGAACTGCTGTGGTTCGTCGCGGGGTGTACAAACGCGAACGT
GCTCAAGGAACGGGGGATCCACATCTGGGACGGCAACGGGTCGAGGGAGT
TCCTTGACGGGTGAGCTGTTTGGGAGACGACCTCGGTGTACACAGCTGCT
GCTGTGGAGTGTAAACAATTTTCCCTGTCGACACTGCGAGTCTTGTGAAG
TCGATTCTTCCTGTTCACATTGAGCAGAATAGATTGAAACACAAACAGCA
GCAGGAGCTTGTTACGACGAGATGTGTACTGTAGAGACTCTACACAATCG
AGGCATCGAGGTCGTCGTCGTCTTAACAGCACCGCGAACGTTTCTATACC
TACATCACGATCTGCGTCTCAAAGAGTCTCGAATCGACTCTCTGTGCTTG
GGTTTTTGAGCCTTGCCTTTGCCGTATTGGGGCTTGCACTGCTGTGTGTA
TCCCCGGAGAGGTCTAATTGCGGAAGCGATTTTGTCCGTACCTTTCTCTG
TCCACGACCCGGAGAGAACTGTGGGTTTACCTTGTGTTGTCAGGACAGCA
GAATATTCGTGCAGGCACCAACGAGGCGGCAAAATACCAGCTGCAAAATA
CAAAGTCCCAACAACAACCGACCGTCCCTTGCTGTGGCGGTCCGACAAGC
AGAACAAAACAACCATTGGTGCTGCTTAACCCTTTTGGGTCTTCAGGCGT
TCTGATAGATCATTGATAGATGATCCGCAATGCTGGTGTATTGGCATGCT
ATGGAGTTGCTGCCCTGTATCCCTTCACGCGACGTGTTAGCAAGTCCATA
GGCATGCATGGATAGGTGTGTCTTTTATATTGGCATCGACCGAAGTCACC
GATGACCAATGGAAAAAGAAGTCAGTCCCATTTGGGAAAATCAAGGTCGT
CCGTCCCTAGCAGGGTATGCATACCAAATGCGGAAATGCATATTGCGCGA
AACGCGCCACAGACAGTGCATCTCTAATTATCCTGCGACACAGATGTAGC
TCCACATGCATGCCCCAAATCTAATAAGCCGCAAGAGCGGCAAACCAAGC
CCAGCAAAGCCAGGATATCCTAGTATGCTGCAGTTCCAAATTTGATAATC
GTACAGTCCCAAGATCCAGGAGTCAATCGTGTCAGCAGCTACACTACAAC
AGCAGTAGCAGTATAGACAAGTCAAACAATACAGGTTCACGTATGCACTA
CCTAGCAGTAGTCTAGTACATTCATAGCTCCACACATATCCTCGCCCGAA
CCTAACAGGGAGCCGTTCATGAGAAGATAGGTGTGTGCTGTTGTGCGTGT
GTGCTTGTGGGGAAAACACGGGAAAAACACAGGAGCTCTAGTGAGCCAGC
AGGGCTCACAATTGGGGGGGGACAGAGAAGTACGGAAGTGCAGATACCGG
CTATAAGTCTCCAAGCCCTCTCATAGATGATTTTCATAGATGATTTCCTC
ACACTGAAAATAGAGTAGTTTTGGCAGCTTGACGACTGATCATATGAAGG
CCTACAAGGTAATCTGCCCTCCCAGCCGCACCGCGACCACACATCAACCT
TTCTATGACCCTGCCTGTCGCTACCACCCTGTCGCGGACTGCCCTCATGG
TCTATGGGTGGAGATAGCTGTTCCATATGTACAAGTACAGCAGTCTCTAT
TGCTGCACTTCTCTCCGCACTGCCTCCCGCCTCTTTTCATTTTTTGGCCG
AAAAAAAAAAAAGTGCAGACCCAAAGGGGTTAAGAGGGACCACTGCAGTC
GCCAGGTTTTCTTTGATCGCCGAGCGCTAGCCTATCATCTGCCAGCCGAA
TCCTACTACCATGTTCATACAATGCAGTGTTTTTGGTATTATTTCACTGT
GAACCACCTTGATGGTGTGACGCTCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCACCACACGACGAACAACTGCAAACAAAGCAGCACAGCGAGCGATCAC
ATAAAAAAACTACACAACNNNNNNNNNNTTTTTAAAAAATGATTTTTTTT
TTTTTTTTTTTCCCTTTTAACCCCCTTTTGGGGTGGCCCGCCCCCCCCCC
CCCCCCCTCCACAGCAGTCAGACAATGGACCCACCACAGCTGTTGAAAAC
GACACCGGCTACATGTTCGGCCTCACGATGTGGGGGTCACTCGAAACGCT
TGTCGTGTTCCTGGGTAGTTGAACATCAGACGGACGCTCGACTCCATCCC
TTCCAATCGCGGCATCCGATCGAATTACGCCTTTGTCTTCTCTCTCTCAC
GCGCCCTCCTTATCCCCCCCCCTCCCTCCACCCGACCGAATGGGCGCAGG
CTGGGACTTACCGAGCGCGAAGAAGGAGACCTTGGGCCGGTGTACGGTTT
CCAATGGAGGCATTTTGGCGCGGAGTACACGGACATGCACGCCGACTACA
CGGGGAAGGGAGTGGACCAGCTCGCGGAGTGTATAAAGAAGATCAAGTGA
GATTTACCAAGAGATGGTTGGATAAATAGGACTAATTAAAGCAAAAAAGA
GCGAAGAGTGCAGACAGGCAGAGAGGCGGTTAGGTTCAGAGACGCGCCAC
CTAACGGGAATCGAACGCGGTCGACATTGTCAGCGATCCATGTTGGCCCG
TGGGGTTTTATCCCTTAAGGGAGACGGTCTCTGGATGCTTTGCAGGCGGG
GTGGGGTGTGAAATATAGAAACGGGTGCACAGATGAACTATGTTTGTCGT
GCCGAGGGACCATGTTGGTGGGGCAAAGCCCGGAGGGAATAGGACGCCAC
TCGCTCCCTCCGCAGAGGGCCGCCTATCCAAATTCTGCTCGACCAAAGCC
CCGTTAAGCAGCCACTTGAAAAGGACTGTAACGTGCTCCTATCTACCAAC
GAGCATCCCCCCCCCCCCCCGGCCTGCTCTAATATCGCCTCGGTCCATAT
TTCCCGTCTTCCAAGGACTAACCCCGAGGACCGGAGAATCGTTCTCTCGG
CGTGGAACCCCGCTGACCTCGGCAAGATGGCCCTGCCGCCGTGCCACATG
TTCTGCCAATTCTATGTGGCTGAGGGGGAGCTGTCCTGCCAGATGTACCA
GCGCAGCGCGGACATGGGCCTCGGTGTTCCGTTCAACATTGCCTCCTACG
CGCTGCTCACGAGGCTCGTTGCTCAGGTGTGCGTGCGCGCCTACGTCGTC
TTGCGGGGGGGGGGGGGGGGGGGGGGAGTTTGCAGATGTTTTTTTTTTTT
TTCGGTGAAAAAAAAAGACCTTCTGGTTTTGTGGCGGGAATGANNNNNNN
GGGGGGCGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGCGTGGAAGT
TTGACCAGTTACTGATTGTCTTCTCGTGAAAGAAAATGACCTACTGCTGT
TGTTGCGGAATGAAATGTTTTCAATTGATTTTTTTCAGTCCGTGTTTTGT
TAGGCAAGTGGGACACCATGTTTCGATATGCTGTCTGGGTTCACCAGCCA
GGGCCACGCAGGAGGGCTCCTCCTGTGGGCCAAGCCTTAGAGTTTTTTAT
CCCGAGAGAAATGCAGTACTACTCTCGACCATCGACAAGTTTCAGTCTAT
GAATGGCGGGTTAGCGTCTGACAAGAGATGCAGTGCTACCCATTTGGATT
GACTCTCTTTGTCGTACTCGGGTTTGCCGGCAAAAAGTAAAAACGGCAGG
TAGTGCAGGGCTCGACAGGGTTCGCTTCTTTGCGCCTTCGTTTCATGGAC
ATGTTCGGCTGAACGTGGGTGGCTGTCGTGGTTGACGTGTAGCCTTGCCT
TGGTGTGCACAACATCAGCCCTCGCCCCTGCATTCGCTCCGGTCTGTATT
GTGTCCGCCGGTGCTCGAAAGTACTGCAAGGTACATCTAGCTAGCTTGTG
AGCTACTTTCATCTCCTGCTGCACTTGTTGCCTTCCCGTCGCTTCCCTGA
CCTGTCTGCCCGTGTACCGCGTGTGATGTCCCGCTCCTTGCCCTTAGACG
TGCGGGCTGAAGGCTGGAGACTTCGTCCACACGATCGGCGACGCCCACGT
CTACGTCAACCACGTGGACGCGCTCAGGGAGCAGCTCAAGCGCAAGCCCC
GCCCCTTCCCGACCCTGTCCATCAACACCGACGAGACCGACATCGACTCC
TTCGAGTACAAGCACTTGGAGGTGAAGGGGTACTCGCCCTACAAGACCAT
CAAGATGAAAATGGCCGTGTGAGCGAGACGGCCAAGGATAGAGAGGGAGA
CGCGACGGTAACGAGGCAATGTGAAGAGAAATGCGCCCTGGTACAGCGGG
GAACCCTTTGCGGCGGAGGCTTGCAAGTCGCTGCACCGCTGGCTCCAGGG
GGAGGCGGGGCGTCTTTGTTCGATGGCAAGGATGTCGAGTGTAAATACGT
GGGGAGGGACAGGAAGCATCACTGCTGCACCGCTGTTTTTTTGTTTGCTA
ATGTGTGTATTTTTTTCCTTCTTTTTTTAGCTCGGGCGCAGTGGTTGATG
TGCCTCCTTCCCGCCACAACGACAAGAGCGAATAGCTCTCTTGTTTTTGT
GTGAGTGTTCGTCGCTCGTCGCCTGAGACTGAGCGCAATCCTGTCTATCT
GGAATGCTTGACCTTCCTGGATGGCATTTTCAACAACTGATGGGTCTACC
ATCTACACGTCCAACTTTCTCATGTAGGGTAAGTGACGGGTTCGCACGTC
ATTCCAAGCGTGCGAATTCGCAGAATTGCGGGATAGGGGGGGTGGCAAAA
ACTAGCGCTGCCACGTTGACTGTATTTACGGGCAGAAGTTGGCTTCAATT
GTAGTTGTCCGCAGCCCGGAGGACAGCTGTAGGATAGCTGTAGCGATACC
TTCACGACTCAAATCAGACGGGGCTAGTCGATCGAAGTCATCTCA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1438:1557..7451+

>mRNA_Ecto-sp13_S_contig1438.3374.1 ID=mRNA_Ecto-sp13_S_contig1438.3374.1|Name=mRNA_Ecto-sp13_S_contig1438.3374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1743bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1438:1557..7451+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTTCCTCTGTTGCGGTCGCCTCTCCTTCCACCTCGCGCTCCTTTGT
CGTCATCGTCGCCGCCACCGCCGGCTCCCTCGGCATCGGCAAGAACGGCG
CGCTTCCCTGGCGCCTGGCCGCCGACATGGCCTACTTCAAGCGCTGCACT
TCCACCCCCACAACGAGCAGCGGCACCACCACTGCCACCACCACCACTGA
CAAGATCAACGCCGTGATCATGGGCCGCAAGACCTGGCAGTCCATCCCCG
AGCGATTTCGCCCCCTCGCGGGCCGCCGCAACGTCGTGCTCAGCCGCAAC
CCCGCGGCCAGAGATACCCTCCGCCTCCCTAAGGACGTGCTCCTGGCCGG
CAGCCTCACCGAGGCCTTGGATCTCCTCTCTCCCGTTGCCGCCTCTGAGG
TGGATAAGGTATTCGTTATCGGCGGGGGCTCGGTCTACGCAGAGGCCGTG
GCGTCGGAGCTTTGCGAGAAGGTGCTGCTGACCTCGGTGACCCCGCCGGC
GGACGGGCGCTTCGACGACTGCGACACCCACTTCCCGGCCCTCGACCCGG
ACACGTTCAAGCTCGTCAAGAAGGGCAAGGCACAGGAGGAGAAAGGGGTC
GAATTCTCCTTCGACGAGTACGAGAGCGTCAACCACTCGGAGGCGGCGGT
GGCGATGGCTGCGGCCGAGGGGGACAAGGAGAACGCAGCCGCAGCAAGCG
TCGTAGGATCCAAGCGCAAGTCTTCTCCCGGCGGAGATCAGGTTGCCGCA
ACCGGCGTTGGAACGCCCGTGGCGGCGGCGGCAGGCGCCGACGGCGCTAT
CTCAGACGCAGCGGCAGCAGCAGGCTCGGCCTCGACAGCACCGGCGCCCC
AGGAGGAGGCGGAGGGCGGTCCGGGGAACGAGGAAGAGATGCAGTACCTC
AACCTGGTGGAGGACATCCTGGACAACGGCGTCCGCAGGGGGGACCGCAC
GGGGACGGGAACGCTGTCGAAGTTTGGCGTGCAGATGCGCTTCAGCCTCA
GGGAAGAGCGCTTCCCGCTGCTAACCACCAAGCGCGTGTTCTGGCGCGGC
GTGGCGGAGGAACTGCTGTGGTTCGTCGCGGGGTGTACAAACGCGAACGT
GCTCAAGGAACGGGGGATCCACATCTGGGACGGCAACGGGTCGAGGGAGT
TCCTTGACGGGCTGGGACTTACCGAGCGCGAAGAAGGAGACCTTGGGCCG
GTGTACGGTTTCCAATGGAGGCATTTTGGCGCGGAGTACACGGACATGCA
CGCCGACTACACGGGGAAGGGAGTGGACCAGCTCGCGGAGTGTATAAAGA
AGATCAAGACTAACCCCGAGGACCGGAGAATCGTTCTCTCGGCGTGGAAC
CCCGCTGACCTCGGCAAGATGGCCCTGCCGCCGTGCCACATGTTCTGCCA
ATTCTATGTGGCTGAGGGGGAGCTGTCCTGCCAGATGTACCAGCGCAGCG
CGGACATGGGCCTCGGTGTTCCGTTCAACATTGCCTCCTACGCGCTGCTC
ACGAGGCTCGTTGCTCAGACGTGCGGGCTGAAGGCTGGAGACTTCGTCCA
CACGATCGGCGACGCCCACGTCTACGTCAACCACGTGGACGCGCTCAGGG
AGCAGCTCAAGCGCAAGCCCCGCCCCTTCCCGACCCTGTCCATCAACACC
GACGAGACCGACATCGACTCCTTCGAGTACAAGCACTTGGAGGTGAAGGG
GTACTCGCCCTACAAGACCATCAAGATGAAAATGGCCGTGTGA
back to top