prot_Ecto-sp13_S_contig14372.3371.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14372.3371.1
Unique Nameprot_Ecto-sp13_S_contig14372.3371.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14372.3371.1 vs. uniprot
Match: D8LLX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX4_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 2.650e-104
Identity = 179/205 (87.32%), Postives = 191/205 (93.17%), Query Frame = 0 
Query:    1 MSVSGARKDKPITTVVEEDGYLLWLSDDDIKSTAGTADQASVIEADSGASVPHSTASRPPSTAAAIVQSIKAMQQQLVDVSLNGVIPVASNASMARYRGAVEKFEASQKALTTVTMSLNAARRDALKASDEVIEAAREAFGEDPEAPSDSASGSAQMNPSSSLSQEKRSSPCSLSQELRQVNLRLARVEQQLALIDVPSGSNAGK 205
            MSVSGA KDK  TTVVEEDGYLLWLSDDDI STAGTADQASVIEA+SG SVPHSTASRPPST+ AIVQSIKAMQQQLVDVSLNG IPVAS+A MARYRGAVEKFEASQKALTTV +SLNAA+RDALKASD+VIEAAREAFGEDPEA SDSASGSAQMNPS+SLSQEKRSSPCSL+QE+RQ NLRLARVEQQLA+I+V SGSN  +
Sbjct:    1 MSVSGADKDKS-TTVVEEDGYLLWLSDDDINSTAGTADQASVIEAESGTSVPHSTASRPPSTSVAIVQSIKAMQQQLVDVSLNGAIPVASDAVMARYRGAVEKFEASQKALTTVAVSLNAAQRDALKASDDVIEAAREAFGEDPEASSDSASGSAQMNPSASLSQEKRSSPCSLTQEVRQANLRLARVEQQLAVINVCSGSNTDR 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14372.3371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLX4_ECTSI2.650e-10487.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14372contigEcto-sp13_S_contig14372:2436..4268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14372.3371.1mRNA_Ecto-sp13_S_contig14372.3371.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14372 2436..4268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14372.3371.1 ID=prot_Ecto-sp13_S_contig14372.3371.1|Name=mRNA_Ecto-sp13_S_contig14372.3371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
MSVSGARKDKPITTVVEEDGYLLWLSDDDIKSTAGTADQASVIEADSGAS
VPHSTASRPPSTAAAIVQSIKAMQQQLVDVSLNGVIPVASNASMARYRGA
VEKFEASQKALTTVTMSLNAARRDALKASDEVIEAAREAFGEDPEAPSDS
ASGSAQMNPSSSLSQEKRSSPCSLSQELRQVNLRLARVEQQLALIDVPSG
SNAGK
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