mRNA_Ecto-sp13_S_contig1437.3368.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1437.3368.1
Unique NamemRNA_Ecto-sp13_S_contig1437.3368.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A6H5JH56_9PHAE (Pyr_redox_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH56_9PHAE)

HSP 1 Score: 991 bits (2563), Expect = 0.000e+0
Identity = 512/552 (92.75%), Postives = 518/552 (93.84%), Query Frame = 1
Query:    1 QVDSKVLENFGGLEDAQFLAEIKKERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 1656
            +VDSKVLENFGGLEDAQFLAEIKKERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVN EANYLEATCTGIDVAQKTITC+NVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQR+AALTFAIVGAGPTGVECCAELRDFIEE G R +                           KAA+SSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQ VEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAA GSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNR LVGTDW+KTKIFGRDITRL
Sbjct:   69 EVDSKVLENFGGLEDAQFLAEIKKERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNPEANYLEATCTGIDVAQKTITCQNVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRIAALTFAIVGAGPTGVECCAELRDFIEEVGRRCW-------------------------CLKAAISSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQEVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAAGGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRFLVGTDWIKTKIFGRDITRL 595          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A835YV14_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV14_9STRA)

HSP 1 Score: 681 bits (1756), Expect = 6.480e-233
Identity = 346/552 (62.68%), Postives = 417/552 (75.54%), Query Frame = 1
Query:    1 QVDSKVLENFGGLEDAQFLAEIKKERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVK-GKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITR 1653
            ++D   L++F    D +FLAE+ KER Y +++ EKA ETVDS+L   K    ++ P TGV KP+V+VLG GWA+HA LK ID   ++VT VSPRNFFL TPMLAASAVGTVE+RSITEPIR VN  ANY+EATCT ID   + I CENVVCEGT+CTIEDF LPYD+L+++VGAT+NTF  PGV EHCIF+KQV DA KLR+AIGNCFERANLPT+++EQ+ A LTF +VG GPTGVE  AELRDFIE++ PRFYP+L+K+VRIKL+EASD+VL  FD  LQ  A+  LTERST LI +GFI+ EMTEV+L VGVK +T T + LS G  +PYGL VWAAGNGPLPLV++ I  + EQKEKA WGRGRLVTDDWLR+ GA  V+A+GDC V++ +PLPQTAQVA+QQG++LARLFSRG+  +A VP+K                            GG K  LSE+LGLS  K GKFAK F F+NLGILAYTG G ALAQVQV  + VK TGA G+ LWRS+Y+SKQVSWRNR+LV  DW K ++FGRDI R
Sbjct:   72 RMDKDRLQSFAAA-DEEFLAELLKERSYLSIVTEKAVETVDSLLTAGKGGDANA-PATGV-KPKVIVLGAGWASHAFLKGIDTDMYDVTVVSPRNFFLMTPMLAASAVGTVEFRSITEPIRNVNLGANYIEATCTAIDSDSQEIVCENVVCEGTSCTIEDFRLPYDHLILAVGATSNTFGIPGVREHCIFMKQVTDADKLRRAIGNCFERANLPTLSDEQKQAVLTFVVVGGGPTGVELTAELRDFIEQDVPRFYPNLVKFVRIKLVEASDRVLMAFDEELQAKALRDLTERSTTLISQGFIKEEMTEVMLNVGVKEITDTTISLSTGETMPYGLCVWAAGNGPLPLVVEAIDQISEQKEKAGWGRGRLVTDDWLRVKGAKGVYAIGDCGVVDQRPLPQTAQVAAQQGSFLARLFSRGYNLNAPVPEKT---------------------------GGAKA-LSEQLGLSSDKSGKFAKGFSFMNLGILAYTGGGNALAQVQVDNQRVKGTGAAGFFLWRSVYMSKQVSWRNRILVAIDWTKARLFGRDIVR 592          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: W7TU07_9STRA (Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU07_9STRA)

HSP 1 Score: 600 bits (1548), Expect = 5.390e-201
Identity = 314/549 (57.19%), Postives = 393/549 (71.58%), Query Frame = 1
Query:   40 EDAQFLAEIKKERPYFAVLAEKASETVDSILKTSKSD--RPDSSP---------PTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITR 1653
            ED++ + E+ KERPY   L+EKA   +D    + K     PD S           +   + R+VVLGTGW AHA L+ +DA K+EV  VSPRNF LFTPMLA SAVGTVE+ SITEPIR+VN  A+YLEATCT ++ AQK+ITC++V+CEG +C IE+FELPYD L+V+VGATTNT+  PGV E+C FLKQ+ DA KLR +IGN FERANLP +++ QR  ALTF IVGAGPTGVE  AELRDF+EE+ P+FYPHLL +VRIKL+EASD+VL++FD ALQ  AV  LTE   KL+++G I  +MTEVLLKVGVK V    + LSDG ++PYGLAVWAAGNGPLPLV +LI+ + EQ+EK A+GRGRLVTD+WLR+ GA  V A+GDC VINDKPLP  AQ ASQQG +L RL S+  +F+ ++P++                      TP     GE + + EK     +   +AK FQFLNLG LAYTG   ALAQ+ V K ++KS+G  G+LLWRS+YLSKQVS RNR LV  DWVK++++GRD+TR
Sbjct:  109 EDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPIT-----------------TP-----GELLSVGEKRENGKI---YAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTR 632          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A0G4FMA0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FMA0_9ALVE)

HSP 1 Score: 566 bits (1460), Expect = 1.040e-187
Identity = 288/495 (58.18%), Postives = 358/495 (72.32%), Query Frame = 1
Query:  184 KPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETE---MTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWG--RGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITR 1653
            K R+V+LG+GW +H+ L  IDA+K++VT VSPRNFFLFTPMLA +A+GTVE+ SITEPIR VN   +YLEATC G+D   +T T E+VVCEGT+C IE+F L YD LVV+VGA T T+  PGV EHC F KQV+ A  +RKAIGNCFE+ANLP ++EEQR   LTF IVGAGPTGVE   ELRDF+E+EGPR+YPHLLKYV IK++EA+DKVL  F+ +LQ+ A++ LTER + L D G +E+E   +T VLL+ GVK VT + + LSDGS +PYG+ VWAAGNGPLPLV D+I+GV+ QKE    G  RGR+VTD WLR+ G  ++FA GDCAV+   PLPQTAQVASQQG +LARL ++ F+  A+VP++                             G KV LSEKL   +     AKPFQFLNLGILAY G G ALAQ+QV +  ++  GA G++LWR +Y +KQVS RNRLLV  DW+KT +FGRDITR
Sbjct:  176 KKRIVLLGSGWGSHSFLSYIDATKYDVTVVSPRNFFLFTPMLAGAALGTVEFGSITEPIRNVNPRVDYLEATCLGVDPETQTATFESVVCEGTSCVIEEFVLSYDMLVVAVGAQTATYGIPGVAEHCYFFKQVEHAAAVRKAIGNCFEKANLPGLSEEQRRNLLTFVIVGAGPTGVELTGELRDFVEKEGPRYYPHLLKYVDIKVVEATDKVLPPFEASLQRRALAELTERRSPLADMGLLESERPCLTSVLLQSGVKRVTDSTVTLSDGSELPYGVIVWAAGNGPLPLVADMIEGVDRQKELKEKGVSRGRIVTDPWLRVQGVKNLFAFGDCAVMETAPLPQTAQVASQQGAFLARLLNKNFDLDASVPKRI----------------------------GPKVFLSEKLPFGVDSRDLAKPFQFLNLGILAYLGGGSALAQIQVDQRQLRQEGAAGWVLWRGVYFTKQVSLRNRLLVALDWLKTSLFGRDITR 642          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A0G4EWF7_VITBC (Pyr_redox_2 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWF7_VITBC)

HSP 1 Score: 548 bits (1411), Expect = 6.640e-181
Identity = 285/538 (52.97%), Postives = 364/538 (67.66%), Query Frame = 1
Query:   55 LAEIKKERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETE---MTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGK--FAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITR 1653
            L ++ K RPY AV+ +K  E VD  L  S   RP +       + R+VVLGTGW +HA L  +DASK+EV  +SPRNFFLFTPMLA +A+GTVEYRSIT+PIR VN   +Y EATCT ID  +KT+ C++VVCEGT+CTIE FE+PYD L++ VGA T T+N PGV EHC FLKQV DA+KLR+AIGN FERAN+P +++ QR A LTF +VGAGPTGVE  +EL DF+E++ PR+YPHLL++VR+KL+EA+D VL  FD +L++ A   L  R  +L+  G ++     +TE+ L+ GVK +T T++ L++G  + YGL VWAAGNGPLPLVL  I    EQK   +  RGRLV D WLR+ GA  +FA+GDC ++++ PLP TAQVASQQG +L RL                 N  V+  A            P+ +  G +  LSE L    + G   + K FQFLNLGILAYTG   ALAQVQ  +  +K  G  G+LLWR +YLSKQVSWRNR LVG DW+KT++FGRDI R
Sbjct:  100 LKDLVKPRPYAAVVTQKFIENVDDFL-VSLRQRPSARGAEKGKRERIVVLGTGWGSHAFLSTVDASKYEVIVISPRNFFLFTPMLAGAALGTVEYRSITDPIRNVNPLVDYYEATCTDIDPVKKTVACQSVVCEGTSCTIEQFEVPYDRLLIGVGAQTATYNIPGVKEHCQFLKQVGDAKKLRRAIGNVFERANIPGLSDAQRQAILTFVVVGAGPTGVELMSELLDFVEQDVPRYYPHLLQHVRVKLVEATDTVLMAFDESLRQKAAERLLSRPDRLVARGLLDASADPLTEIKLQAGVKEITDTEVVLTNGDRVAYGLVVWAAGNGPLPLVLSAIDKFSEQKAAQSKARGRLVVDPWLRVKGADDIFAIGDCTLMDETPLPATAQVASQQGAFLGRLL----------------NHDVDLRAH-----------PIPKRLGRRGSLSEVL----IDGSNDYPKAFQFLNLGILAYTGDNSALAQVQFDQNVIKQAGTVGWLLWRGVYLSKQVSWRNRFLVGVDWLKTRMFGRDICR 605          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A7R9UDT3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDT3_9STRA)

HSP 1 Score: 545 bits (1403), Expect = 1.190e-179
Identity = 291/546 (53.30%), Postives = 370/546 (67.77%), Query Frame = 1
Query:   73 ERPYFAVLAEKASETVDS-----------ILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASK-FEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAW------GRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 1656
            ERPY  VL E+  E VD             L+ ++S      P     +P+VVVLGTGWA+H+LLK IDA K F V  +SPRN+FLFTPMLA +AVGTVE RSITEPIR+VN  A+YLEAT T I+   K++TC+++VCEGT C IE+F++ YD LV+ VGATTNTF  PGV EHC+FLKQV DA+++R AIGN FERAN+P++T+EQR  ALTF  +GAGPTGVE  +ELRDF+ ++ P++YPHLLK VR+ LIEA++++L  FD  +  AA++SL   + K +         TEV+L VGVK V   ++ LSDG  +PYGL++WAAGNGPLPLVL+ I  +  QK+          GRGRL+ D WLR+ GAP VFA+GDC++++ +PLP TAQVASQQ T+LARL S  ++ +A +P            A GS   S     P  +    K        L   + +FAKPFQFLNLGILAY G    +AQ+QV K  VKS G  G+LLWRSIYLSKQVSWRNR LV  DW+KT +FGRD+TRL
Sbjct:   86 ERPYLQVLVERGLEQVDEAAEKVRSTVVDFLEDAESKAAKPGPKPKAERPKVVVLGTGWASHSLLKGIDAQKKFNVVVISPRNYFLFTPMLAGAAVGTVEDRSITEPIRRVNKNADYLEATVTAINPDSKSVTCQSIVCEGTACDIEEFDVEYDKLVIGVGATTNTFGIPGVKEHCMFLKQVDDARRIRSAIGNVFERANIPSLTDEQREQALTFVTIGAGPTGVEFTSELRDFLAQDAPKYYPHLLKSVRVILIEATNRILGAFDEDMANAAMASLERGTDKRVP--------TEVILGVGVKEVKQREILLSDGRTVPYGLSIWAAGNGPLPLVLETINKIPVQKDMQEQNLVPRGGRGRLLVDGWLRVKGAPDVFAVGDCSIMDTQPLPATAQVASQQATFLARLLSGDYDTTAKIP-----------TAVGSDIRSSDRFMPAQQRDSGKGAADAAAALEPPQ-RFAKPFQFLNLGILAYVGNDKGIAQLQVNKTPVKSKGFGGWLLWRSIYLSKQVSWRNRALVAIDWMKTTLFGRDLTRL 611          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A7S2WE14_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WE14_9STRA)

HSP 1 Score: 542 bits (1396), Expect = 1.290e-179
Identity = 268/538 (49.81%), Postives = 368/538 (68.40%), Query Frame = 1
Query:   43 DAQFLAEIKKERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 1656
            DA  L  +++ + YF ++  K  E VD +        P     T   K +VVVLG+GW A A +  ++A K+E   VSPRNFFLFTPMLA ++VGTVEYRSIT+PIR+ N   +YLEATCT ++   K ITC++V CEG+ C I+ F++ YD+L+VSVGATTN+F   GV EHC FLKQ++DA ++R+ + NCFERAN+P +T++QR A LTF ++GAGPTGVE CAEL DF+EE+ P++YPHL+K+VR+KLIEA+DKVL  FD  LQ+ A+ +LT+R+++L +    +  + E+ L+ GV  V  ++++LSDGS+IPYGL+VWAAGNGP+PL LDL   + EQ+ +    RGRLV D WLR+LGAP ++A+GDC+ +   P   TAQVA+QQG +L R+FSR ++  + +P++                             GEK  L ++L          +PFQFLNLGILAY G   ALAQ+Q+ +  +KSTG  G+ LWRS+YLSKQVSWRNR+LV  DW+KT+ FGRD+TR+
Sbjct:   41 DAALLKRLEEPKSYFELIWAKTLEAVDDVFF------PAGDLDTSGVKEKVVVLGSGWGAQAFVSSLNADKYEAVIVSPRNFFLFTPMLAGASVGTVEYRSITQPIREANPAVDYLEATCTDVNPEAKRITCQSVACEGSVCDIQTFDVDYDHLIVSVGATTNSFGVAGVSEHCHFLKQIEDAARIRRNVVNCFERANVPELTDDQRKAILTFVVIGAGPTGVEFCAELCDFLEEDAPKYYPHLMKHVRVKLIEAADKVLMAFDAQLQQEAIQTLTQRNSRLGNSDATDPFL-EIRLQAGVNEVQASEIKLSDGSSIPYGLSVWAAGNGPIPLTLDLTNRIPEQESRQQAARGRLVVDPWLRVLGAPGIWAIGDCSFVESSPCVATAQVAAQQGAFLGRMFSRNYDLDSALPRR----------------------------AGEKFGLVQQLSFG-ESADVLEPFQFLNLGILAYIGDSKALAQIQLDENVLKSTGTAGFALWRSVYLSKQVSWRNRVLVFIDWLKTRAFGRDMTRI 542          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A7S4IZG0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZG0_9STRA)

HSP 1 Score: 538 bits (1385), Expect = 8.590e-178
Identity = 292/556 (52.52%), Postives = 379/556 (68.17%), Query Frame = 1
Query:   70 KERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFI-----ETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWG---------------RGRLVTDDWLRLLGAPS-VFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEK-VPLSEKLGLSIVK--GKFAKPFQFLNLGILAYTGAGGALAQVQVGKES---VKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 1656
            K R Y   LAEKA++ V+  L  S  +  D    +   K ++VVLG GW A A LK+ID SKF+VT +SPRNFFLFTPMLA SAVGTV+YRSITEP+R++N +ANYLEAT T ID    T++CE+VVCEGT+C IEDF +PYD L+V+VGA TNTF  PGV EHC FLKQV+DA+++R AI NCFERANLP +++++R A LTFA++GAGPTG+E  +ELRDF+E +G ++YP L+++V++K+IEAS  VL+ FD +LQ+ A+  L ER T++ DE        + ++TE+LL  GV  V  + + L+ G +IPYG+AVWAAGNGPLP+ L +I  ++E++E A  G               RGRL  D WLR LG    + ALGDC+ +    LP TAQVASQQG YLA+L S G++F    P ++     V   ARG            G+DGGEK + +SE +     +  G FA PFQFLNLGILAYTG G ALAQ+QV  +    VK +G  G+ LWRS+YLSKQVSWRNR LV  DW K ++FGRDITR+
Sbjct:   15 KPRAYPLFLAEKAAQIVEGALPKSVDE--DGGGISNGEKEKIVVLGVGWGAAAFLKDIDTSKFDVTVISPRNFFLFTPMLAGSAVGTVDYRSITEPVRQINPKANYLEATATSIDPEAGTVSCESVVCEGTSCAIEDFAVPYDKLLVTVGAQTNTFGIPGVREHCCFLKQVEDARRIRTAIVNCFERANLPYLSDDERRATLTFAVIGAGPTGIEFASELRDFVESDGAKYYPDLIRFVKVKVIEASPTVLAPFDESLQEEAIRQL-ERPTRVKDEAVASKLPPDFKLTELLLNSGVAEVKESSIALTTGEDIPYGIAVWAAGNGPLPITLQVIDALKEREEGAEGGAAETSSEQADAQDAARGRLAVDPWLRALGGEGRILALGDCSCVVTGQLPATAQVASQQGEYLAKLLSGGYDF---FPGRDEAEGIVLPPARGRG----------GDDGGEKSMSVSESIAAFACQSGGDFAAPFQFLNLGILAYTGGGSALAQLQVTPDERGRVKGSGKVGFGLWRSVYLSKQVSWRNRFLVFVDWTKAQLFGRDITRV 554          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A7S1UIM8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIM8_9STRA)

HSP 1 Score: 530 bits (1364), Expect = 1.220e-173
Identity = 290/552 (52.54%), Postives = 370/552 (67.03%), Query Frame = 1
Query:   73 ERPYFAVLAEKASETVDSILKTSKS------DRPDSSPPTGVP------KPRVVVLGTGWAAHALLKEIDAS-KFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKA------AWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDT-----PLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 1656
            ERPY  ++AE+  ET+D I+  ++       +  D +  T         + RVVVLGTGW A++ LK IDA+ K++V  +SPRN+FLFTPMLA +AVGTVEYRSITEPIR+VN +A+YLEAT T ID  +K +T ++VVCEG +C IEDFEL YD LVVSVGATTNTF   GV E+C FLKQ++DA +LR AIGN FERAN+P++T+EQR  ALTF ++GAGPTGVE  +ELRDF+ ++ PR+YP LL+YVR+ L+EA+ ++L  FD  +  AA +SL       +          EV++ VGV  V   ++ L+DG  IPYG++VWAAG GPLPL LD I  + EQK           GRGRL+TD WLR+ GAP +FALGDCA+++ +PLP TAQVASQQ T+LARL S  ++ S  VP     N  + A+ +     +   D      P G+   ++V             K+AKPFQFLNLGILAY G    +AQ+QV K  VKS G  G+LLWRSIYLSKQVSWRNR LV  DWVK +IFGRDITRL
Sbjct:   90 ERPYLQIIAERGLETLDEIIVATREKFDAFMEDEDMAAATRXXXXXKGERERVVVLGTGWGAYSFLKSIDAAEKYDVVVISPRNYFLFTPMLAGAAVGTVEYRSITEPIRRVNEDADYLEATVTEIDPERKVVTAQSVVCEGMSCDIEDFELSYDKLVVSVGATTNTFGIKGVKENCAFLKQIEDAARLRSAIGNVFERANIPSLTDEQRRQALTFVVIGAGPTGVEFTSELRDFLAQDAPRYYPELLQYVRVVLVEATGRILGAFDEDMANAAKASLERDGDNRVP--------CEVIVGVGVNEVKEREVLLADGRTIPYGISVWAAGIGPLPLTLDTINRIPEQKTAQDENTVPRGGRGRLLTDGWLRVRGAPDIFALGDCAIMDTQPLPATAQVASQQATFLARLLSGDYDVSEPVPTVVGPN--IRASDKFFPIYNKFVDAQVWTHPEGDVARQEVNEGAPF-------KYAKPFQFLNLGILAYVGNDRGIAQLQVNKTPVKSKGVAGWLLWRSIYLSKQVSWRNRALVAADWVKARIFGRDITRL 624          
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Match: A0A7S2WJC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJC1_9STRA)

HSP 1 Score: 525 bits (1351), Expect = 1.420e-171
Identity = 279/543 (51.38%), Postives = 368/543 (67.77%), Query Frame = 1
Query:   64 IKKERPYFAVLAEKASETVDSILKTSKSDRPDSSPPTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGFIET-----EMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKA---AWGRGRLVTDDWLRLLGAP-SVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDTPLGEDGGEKVPLSEKL-GLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQV---GKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITR 1653
            I K R Y   L EKA+  V+ +L +   D  +++ P    K ++V+LGTGW + A LKEID  K++VT +SPRNFFLFTPMLA S+VGTVEYRSITEPIR++N +A YLE T T ID+  KT+ CE+VVCEG +CTIEDF++ YD L+ +VGA TNTF  PGV E+C FLKQV DA+++R A+ NCFERANLP +T+E+R A LTFA++GAGPTGVE  +ELRDF+E++GP++YP+LLK+VRIK+IEAS  VL+ FD  LQ+ AV  LT R     D  +++      E+TE+LL  GV  V    + L DG  IPYG+AVWAAGNGPLP+ L LI  ++++K++A   +  RGR+  D WLR+LG+  S+  LGD + +    LP TAQVA QQG YL RL S  ++   T P  +  N+ +                P   +   +   +EK+   +    +FA PFQFLNLGILAYTG G ALAQ+++   G + VK +G  G+ LWRS+YLSKQ+S RNR LV  DW KT++FGRDITR
Sbjct:  110 ILKPRAYPLFLMEKAAIIVEDLLASISMDDQETTSPNQTEKEKIVILGTGWGSAAFLKEIDTDKYDVTVISPRNFFLFTPMLAGSSVGTVEYRSITEPIREINRKAGYLEGTATNIDIENKTVFCESVVCEGNSCTIEDFDVQYDKLIFAVGAQTNTFGIPGVREYCCFLKQVDDARRIRTALVNCFERANLPNLTDEKREAILTFAVIGAGPTGVEFASELRDFVEQDGPKYYPNLLKHVRIKVIEASPTVLAPFDKTLQEEAVRQLT-RKIMPKDPSYVDLMPANFELTELLLNSGVSEVKKDVIALDDGREIPYGMAVWAAGNGPLPITLQLIDSLKDKKQQADVQSLARGRIAIDSWLRVLGSDGSIMGLGDASCVVAGQLPATAQVAGQQGEYLGRLLSLNYD---TSPGIDPTNKFL---------------LPPKPNPNREKTFAEKITAFATQSDEFAAPFQFLNLGILAYTGGGSALAQIELLPSGDKKVKGSGKIGFGLWRSVYLSKQISGRNRFLVFVDWTKTQLFGRDITR 633          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1437.3368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH56_9PHAE0.000e+092.75Pyr_redox_2 domain-containing protein n=2 Tax=Ecto... [more]
A0A835YV14_9STRA6.480e-23362.68NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
W7TU07_9STRA5.390e-20157.19Pyridine nucleotide-disulfide oxidoreductase, FAD/... [more]
A0A0G4FMA0_9ALVE1.040e-18758.18Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A0G4EWF7_VITBC6.640e-18152.97Pyr_redox_2 domain-containing protein n=1 Tax=Vitr... [more]
A0A7R9UDT3_9STRA1.190e-17953.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2WE14_9STRA1.290e-17949.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4IZG0_9STRA8.590e-17852.52Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1UIM8_9STRA1.220e-17352.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WJC1_9STRA1.420e-17151.38Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1437contigEcto-sp13_S_contig1437:6321..15570 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score446.8
Seed ortholog evalue1.2e-122
Seed eggNOG ortholog2850.Phatr26970
Model size3021
KEGG koko:K03885,ko:K17871
KEGG Pathwayko00190,map00190
Hectar predicted targeting categoryother localisation
Exons13
EggNOG free text desc.Pyridine nucleotide-disulphide oxidoreductase
EggNOG OGs2XB5Y@2836,COG1252@1,KOG2495@2759
Ec32 ortholog descriptionNADH dehydrogenase (ubiquinone)
Ec32 orthologEc-10_005810.1
EC1.6.5.9,1.6.99.3
Cds size1356
COG Functional cat.C
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462767.3203247-UTR-Ecto-sp13_S_contig1437:6320..68581681462767.3203247-UTR-Ecto-sp13_S_contig1437:6320..6858Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1437 6321..6858 -
1681462767.3306205-UTR-Ecto-sp13_S_contig1437:6876..77001681462767.3306205-UTR-Ecto-sp13_S_contig1437:6876..7700Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1437 6877..7700 -
1681462767.4412143-UTR-Ecto-sp13_S_contig1437:14860..149711681462767.4412143-UTR-Ecto-sp13_S_contig1437:14860..14971Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1437 14861..14971 -
1681462767.4550679-UTR-Ecto-sp13_S_contig1437:15378..155701681462767.4550679-UTR-Ecto-sp13_S_contig1437:15378..15570Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1437 15379..15570 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462767.3410912-CDS-Ecto-sp13_S_contig1437:7700..77811681462767.3410912-CDS-Ecto-sp13_S_contig1437:7700..7781Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 7701..7781 -
1681462767.3493304-CDS-Ecto-sp13_S_contig1437:8252..83271681462767.3493304-CDS-Ecto-sp13_S_contig1437:8252..8327Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 8253..8327 -
1681462767.3576853-CDS-Ecto-sp13_S_contig1437:8923..92201681462767.3576853-CDS-Ecto-sp13_S_contig1437:8923..9220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 8924..9220 -
1681462767.3673558-CDS-Ecto-sp13_S_contig1437:9834..99431681462767.3673558-CDS-Ecto-sp13_S_contig1437:9834..9943Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 9835..9943 -
1681462767.3769205-CDS-Ecto-sp13_S_contig1437:10518..107061681462767.3769205-CDS-Ecto-sp13_S_contig1437:10518..10706Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 10519..10706 -
1681462767.3861148-CDS-Ecto-sp13_S_contig1437:11690..117901681462767.3861148-CDS-Ecto-sp13_S_contig1437:11690..11790Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 11691..11790 -
1681462767.3956702-CDS-Ecto-sp13_S_contig1437:12425..124871681462767.3956702-CDS-Ecto-sp13_S_contig1437:12425..12487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 12426..12487 -
1681462767.4037533-CDS-Ecto-sp13_S_contig1437:12897..130381681462767.4037533-CDS-Ecto-sp13_S_contig1437:12897..13038Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 12898..13038 -
1681462767.4118457-CDS-Ecto-sp13_S_contig1437:13424..135531681462767.4118457-CDS-Ecto-sp13_S_contig1437:13424..13553Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 13425..13553 -
1681462767.4201443-CDS-Ecto-sp13_S_contig1437:14115..142661681462767.4201443-CDS-Ecto-sp13_S_contig1437:14115..14266Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 14116..14266 -
1681462767.4312081-CDS-Ecto-sp13_S_contig1437:14837..148601681462767.4312081-CDS-Ecto-sp13_S_contig1437:14837..14860Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1437 14838..14860 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1437.3368.1prot_Ecto-sp13_S_contig1437.3368.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1437 7701..14860 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1437.3368.1

>prot_Ecto-sp13_S_contig1437.3368.1 ID=prot_Ecto-sp13_S_contig1437.3368.1|Name=mRNA_Ecto-sp13_S_contig1437.3368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=452bp
MLAASAVGTVEYRSITEPIRKVNSEANYLEATCTGIDVAQKTITCENVVC
EGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLR
KAIGNCFERANLPTVTEEQRVAALTFAIVGAGPTGVECCAELRDFIEEEG
PRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDEGF
IETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDL
IQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTA
QVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAARGSAASSDGSDT
PLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQ
VGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITR
L*
back to top

mRNA from alignment at Ecto-sp13_S_contig1437:6321..15570-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1437.3368.1 ID=mRNA_Ecto-sp13_S_contig1437.3368.1|Name=mRNA_Ecto-sp13_S_contig1437.3368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9250bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1437:6321..15570- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGGACTCGAAGGTGCTGGAGAACTTCGGGGGACTGGAGGACGCACA GTTTCTCGCCGAGATCAAGAAGGAGAGGCCCTACTTTGCAGTCCTCGCCG AGAAGGCCTCCGAAACCGTCGACTCCATCTTGAAAACCTCCAAGAGTGAC AGACCGGACAGCTCGCCCCCGACTGGCGTACCCAAGCCGAGGGTACGTGT GATTTGATGAATCAATGTTAGGGTTGGGGTTACTACGAGTGTTGGAGCTT GTGTGCGTTTCGATGTTTGTTGTTATTTTGCGCTTGCTCTGCTGCCGGCA TGTATTGGGCATCAGCTGCAGCAGCTGTCGATGGATACTGCGGCACAAAT AATGAACTACACTACGAAGTAGTGTGGACGCAGACGAGACAACGGCAGCT CAAGCAGCAGCAGGATGACACTGCAGCACCGCACGGACTGCTGCTGCTGC TGCTACTGCTGCTGCTGGCATGACACGTGAAACCCCTGTTCATCACGGTT TGCGTACGGGAATTATCTTTTTTATTGTGTTGTTTCCGAGTTTGTTTTTT TTGGCGGCCGTGTCCCCAATCTCTACAACGCCGCCCCCGTGTTGCAAAGG TGGTCGTTCTGGGAACGGGCTGGGCGGCCCACGCCCTCCTCAAGGAGATC GACGCCAGCAAGTTTGAGGTCACGACGGTGTCGCCTAGAAATTTCTTCCT CTTCACCCCGATGCTGGCGGCATCTGCGGTCGGGTACGCCTTCAAGTCGA TCGATCTGGGCTGTTTTGGCACAAAGGGTGTTGGAGGGTGAATGAAGTAC ACGTTCGACCGAACACTATCATTGTCGGCAACGCAGACCTGTGCTGCGCT GTGTGCACATGGACGATATCATTTCTTGGGCAGTGCACTCTTTGTTTGTG TGTAGGTGCCCCGTTCTGCGCCAGATTTCAACGTTGAGAACCGTATTACT GGACGGGCGGTGTGCATATACGTGTCTTTAGTTGGCATGGACCATGCTAC CGGGCTTGCCAACAGAAGGAGGCAAACCCTAGCGAGGACGAGCACCCGAG AATATACGTTGGTACTCTGTTTTGGTGATGCATGTTTTTCGTATTTTCGC TCGGTGCCTGGCTCGCAAGGACCGGCCATGTAGACTGCTGTCGAGATGGG TATAATGTATCTCCAGTCAGCAAGGAACTTCAACTTTGTGTTGTTTTTTT TTTGGGGGGGGTGATGCAATACGTCAAAACAAACACTAGCTAAACGGCAT CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACCGGAATCGTTTTGCCGAG GCAGGACGGTGGAGTACCGCTCCATCACAGAGCCCATCCGTAAGGTTAAT TCTGAGGCAAACTACCTGGAGGCCACGTGCACGGGCATTGACGTGGCCCA GAAAACCATCACCTGCGAGAACGTGGTCTGTGAGGGTACCACTTGCACCA TAGAGGCGAGTGGTCGAGGATTCGGGCTCTCAAACGGAGCTCCAGAAGAA GCTTTCTGCCAGCTGTCATAACGAGGAATTCAGCACCCCGACAGAGCTGT GTAGGAATGAGCAGTACAGTACAAGCATGAACACCATTGGTCCGCACTTC AACGGATCTGTCTTCATGTGTAGAATGAGCAGTGTGGTGGGAGCATGGGC CAACGTACACCTTGCTTACGTGCTGGTGATTGCTATGGTTTTGATGAGGA CACGATGACTGCAGGTGTACCGTTATTTGTGCCTGTTTCGCAGACTTTCC CAAGAGTTTCATGTGCTCGTTTCCTTTGCTGCCATTTTTAGGCCCAGCAT GCAACACGCTTTGTGCTAAGGCGGATAAACACCGCAGCCAACAAACCCTT CGACTTTCTACCACTCTTTTCCTGCTGTTTGATGGTTGCCGAGTTGGGCG ATTTTTACGTTTTAACGCCTTCTCGTGTCCTCCTCCAATCCTTCCTCGAG CGTTTCGTCAATCTCATGGTTATTCGTTTCTTTTTTGTTCCCGTCTTCAA CGGTTTCGCTTTTGAAGGACTTCGAGTTGCCGTACGACTACTTGGTGGTG TCTGTCGGAGCCACTACCAACACCTTCAACACCCCGGGCGTCATGGAACA CTGCATCTTCCTTAAGCAAGTCCAAGATGCTCAGAAGCTCAGAAAGGTGA GGGGGTGGAGAGAGAGAGAGAGAGAGAGCGAATTGTTGTGGCCATCAGCT TTTCGATGGCTAGGAGGCGTGACCCGAATCCGACACCCTGACCCTGATTG TACCGTAATTTACTAGTAGCCCTTTGGATGTTCGTCCTTTTCGTTAGCAC AGGGTACAAAGATGTAAAGTAGCGGAGGTGTGGAGAGGAAAGAGAGAAAA AACACCTTGTCTCTTGCGGGTATTCTTTGTCGAAAGCGGTTCGTGGCTCT TTCGTTGCTGCAATATGTCTGGCCTGAAGTAGCAGATAATATGCACGTTC CTCATCTCCCTGTTATGTCTCTCTCCACCCTAACAAGACGCTGTTCACCA ATGTACGTGTTTCGTGTGTTTCGTCTGCGTAGGCGATCGGCAACTGCTTC GAGCGAGCCAACCTGCCGACGGTGACGGAGGAGCAGAGGGTCGCGGCCCT CACCTTCGCCATCGTGGGGGCCGGGCCCACCGGAGTGGAGTGCTGCGCAG AGCTCAGAGATTTCATCGAAGAGGTGGGACGGCGGTGTTGGTACCGTGTA CTCCTGCTGCTGTGGTTGTTGTTGTTGGTAGTGGTAATGGTGGTGTTGTT TTCGCGTCAAAAAACGGTTCGATCTCTGCTCCGTACTGGTTGACGCGTCC GCCTTCCTTGGCCACACGCTAACGGCCCCAAAACAGGTGTTCTACTTCCC AGTCATCCTTATGCATCCCTCGTTTCTGAACTAGATACATCGAGAGTAGG TGCAAGTGCTAAAGTTTCGTCTGCCGCACCAGCCACAAGCCGTAGAATAC AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGTGTACTGGCGAG TGGCGTGCTTTATCTCCTCTCCCGCTGTTGTTTTCTTCCCCTGATGGCTC GACGACGATGATGATCATGATGTTGCTCTACAGGAGGGGCCGCGATTCTA CCCGCACCTGCTCAAGTACGTCAGGATCAAGCTCATCGAAGCCAGGTGAC ATGGCAGACCACGGCGCAAAAAGTGGTAAATGGAAGGGTTTGTGGCGTAC AGCTCTGTTTTTCGGCCCCAGACCACGCTGTGCCGGGCCACAAACCCTTA CAGAAGGAGTGTGCGGGTGGGAATGAGGTGTCCCGCCGCACAGTGAGGTA CTCAAGATTGTGTTTGCTGCACAATACTGTGTAAGGTAATAGCCCGCGAA GCTACAACGTTATTGTCGAATACGACGGAGTATTGTACAAAGTTGCTGAA GCACTAACAGTGTTGAACGTCTTCATGTAAGGCGCGGTGGTAAAACAGTG GTGCGCGAAGTTGGCAAGTTGTCACACACTGTGCAACCGACCGGTGCGGT AGCTCTTACTGCGCGCGAAGTGTCTGCACCACGCGGAGACATTCTCTTCA CACTACAGACTATCAAGCGTCTTGCTAGTTGTCATTGTGTTATGTTCTAG TCCGGTCTCTGTTTTGCCACTGCACAAAGCAACAAGTTCAAATCTGATCG CGGCTTCGAGTGAGAGGAGTATTTTGCCATCAATGTTTCACGTCTTTTTT CTTCGCCGCACATACCATGCTTTTTCATCCTTTTTCCCTTTTGCTTTGTC TTTGTCCTCTCTTTTTTTTTCTCGCAATAGCGACAAGGTTTTGTCGGTGT TCGACGGTGCCCTGCAGAAGGCGGCGGTCTCCAGTCTCACCGAGCGGTCC ACCAAGCTCATCGACGAAGGCTTCATCGAGGTAGAGTGTATGCACTCATC ATTTTGTGGTGTTGGCAGTGTACCAGGTGTCTTGCTGCGAACGAGCGATA AGCGACGCGTGATGAATGGGGTGACCAACCAAGAAACTCGAGGTGTGGCG TTCGAGGGCAGTGGACGTACCCTCTTGTTGCTCTGCTTTCTGGCGCCCGC CGCGTGCTCGGTGTTCTTGGACAGCTCTCGACGACTGAGATTGAAGCGAT TCCAGGTATCCTTACATGTAGCGCCGTGTGAAACGCTGCAGTCGTACACA GCGTCCTGTGTTCATCCATGTGCGGTGGACGTGGCGTGCACAGCACCTTG CTGTACGGTAGTTGCCAATGTGGGCTGGGAAACAACCCGTTACACCGGTA TGCATAGATAGGTCATCCGTCAATGACAAATCTGTGTGTGCCTTCGTTCT GCGACCACCCTTGAGGATTTTTTTTTGGAGACGAAGACAGCAGCACGCCC TCGAACTGTTGACTTTTGAGCGTATGTGTCACACAGACCAAGATGCGCGT ATGTGTAATCGGCGTACAAACCTTTGGCCAGAAGCTTTTCTCCCCTTGCC CCCCATGCTGCGGGTACTGCTGTGCTTCCTGTTCTCGACTTTACCGTTAA GGTTGTCTGGGGCGTTGTTTTATGTTGGTGTGAATAGAGCCACCGGATGC ATGCTCTATACTGGTACACGTCAGCTCAACAAGGACCCTGGGCCCTCATC ACCCACTCATGACTGGAGCCATGCTTTACCGTACGCATATTGTATTATCT TTGTGGAGTACCAGTGGGAGCCGGTGGCCGTGCCTTCCCTACTCTTATGG GGGACTTGAGATACGACACGTCGGCGTAATATGATACCGATGGCGATGCG ATTGTTTCGCTGCCACACCAAGCAGTCCTGACACCGTTGATCGGTGTAAC CTCACGAGAGGCGCTTTGCATTTTGCTGCCAATGTATCGCGGCATGTTTT CAATCGCAATAAAGACGGAGATGACTGAGGTGCTGCTAAAGGTGGGCGTG AAGGCCGTCACCGGCACCCAGCTCGAGCTGTCGGATGGGTCCAACATTCC TTACGGGCTCGCGGTCTGGGCGGCCGGAAACGGTCCGTTGCCCCTCGTGC TTGACCTCATCCAGGGGGTGGAGGAGCAAAAGGAAAAGGCCGCATGGGGC AGGTAACATCCGGCCTCTGACTTGTGCTATACGCTCACATGTGCCCCAAA CACCCAAAAAAAATTGAGTATTGTAAACCCTGATATGTACCCGTCAAGTG TTACACTATTACAGTACCGACAGAGAAGGTACTGGGCAGAGAGATCGGAA CGGTTTTTCATCTGAAGACAACAACAACAATAGACAACATATGTAATATT TCATGTCGTTTTATCGCCTTTTGCTTCGTAATGTTTGGGGTCTCTGCCTG TCCGTTGTTGCTTTTTGTGCGTGCAAGCACACGACGTCTTGTCGGCCTGG TGAGCAGGATCATGCACAAGATTCGGCTTGTAAATACGACGCACGTGCTG TTGTTTGAAATTTCGTTCTGCTCTGTTGAATTTCCCGGCGAAGTGTATGC TCGAGCGCGATACTTTGACGAGCATGGTCGGGGTGACAAGTTGACCCACT GACTCGACCCGTTCCTTGAAAAAGACGCTAGACACCTCTAGCTTCTGTGA TCTTATCGCCTCCTTATGCCGTAAACGCCTCCTCCTGCTTTGACGCCCCT CCTCCGCTTCATGAAAACGACGGGAAGGGGGCGGCTGGTGACGGATGACT GGCTTCGTCTCCTCGGCGCCCCCTCGGTGTTCGCCTTGGGTGACTGCGCC GTCATCAACGACAAGCCTCTCCCGCAAACGGCACAGGTAATCCCGTTCAC AGCAGCCTGTCTACTGTATCGTTTGATGTAGTGAAAGAAGGTGTTCAACG TTGTAAGGTCAGTCAGGTCGGGGTGTTAGCGTCGCAGACGGCACAGGTGG TTGAATGCGTGTGCAAGCTGTCCGCTGTTTCGATTCCTAGCAAGAAGGTC GACGATGTGGCGGGGGGAAAGTTGAGAGCAAGCGGTGAAAATCACTATGC TGGCGCTGCACGGGTTCCCTGAGAGAGGGTGCACGCAAGGCGAAATATGG TAAAGGTTGGGCAGAAGCAAGAGAGAGAGGGAGGCGAAAAGGTACACACC CCAAAGGACACCAGCGATAACGTGTAGGCTAGACGTAACAATCGCCCCCA AACGCAAGACAAGGAGTATCCGGAACAGAGGCAGCCCATCGTTCGCGGAT CACCAGTTCCTCCTGCTATCGCCCCGCGAGACGTAAGCCGCCCTCCCCCA ACCAATCGATGACGCACTTACCCAGCACATGAAACGCCTCTTTGTTGTTT GTTTTGAGTTAACACGACCGTACACACCAGTATACTTGAATGAAACAACG TGACATCACACTTGGACACCGTGACGTCACTCTCGGGGCATCCAATCCAG GTTGCTTCGCAGCAAGGGACGTACCTGGCGCGCCTATTCTCTAGAGGGTT CGAGTTTTCCGCCACGGTACCGCAGAAGAACACCGACAACGAGGGAGTCG AAGCGGCTGCCAGGGGCTCCGCAGCATCATCCGACGGATCAGACACCCCC CTCGGCGAGGACGGCGGAGAGAAGGTGCCTCTCTCCGAGAAGCTGGGACT GAGCATCGTCAAGGGGAAGTTCGCCAAGCCCTTCCAGTTCCTCAACCTGG GCATCCTTGCCTACACCGGCGCTGGCGGGGCGCTGGCCCAGGTCCAGGTG AGGCAGGGGGGTACAGCAGTAGTCTACGCAGGTGTTTAAGTAATTGGTTA ACGTATTGAATCGGCCAAGTAGGGGTAAGGGTTAGGGTCTGCGTACCCGG TTTTTCGTTGTAGACTTACACTTAATGGCGTCGGTCCGGGAGGGGGAGGG GTACGCCCACGGCCAGGATTCTTGTTTCTTCTGCAGGTCGGAAATCGTGC GCGCACGCCTTGCCTGCAAGAGAGAAGAGAAGAGAGAAGAGCTCTTCAAG AGGTACCCCAACGAATCGCGCTCCTGGACTCAAGAGTGTCGTGTTTTCGC CGACCCCAGCAGGCTCCCCAGGGGGGGGGGGGTACTCTTGTTTTACATTG ATTATTTGCGTTGATTATTGTCATTGATTATTGGCACTGTCAGTAGCGGT TTCACTTTTTCGTTGGTTGGTGCATTCATCCCTTTCGGGACCGGGGCCCC AAGCGTTGTCACCTGGCGCACGAGAATCCTGCCGTCATTTGTCGATGTGG CCGCGTTGTTCTCGTGCTATATTTCTGTCAACTCTTCTTTTGTGTCCCGT CGCACCTCGAAAATGGTGATGATGATTGTTGTGTGTTGGGCAGGTTGGCA AGGAATCGGTCAAGAGCACGGGGGCCACCGGCTACCTTCTGTGGCGAAGC ATTTACCTCAGCAAGCAGGTAACGAGCATGATTGGTCCTTTTTTTGAAAA TTTCACGTCGACAGCCGCAGCTGCCAGTTCACATATATGTACCTGTAGTA TGGAACACGTCGTGCAGTCAAGTTGTGCCCTGCGAGACTCGTCCACGGCG GGATTGAAAGCTGGGAAACGTAACCCTCACCGAAGTTCAACAGTCAAGAA CGATGTTTGCTTCGTTTCGGTTCTGAATGGTGTTGCTTTGTGGGCAATAT GTGTCGGCACCGCACCCATCCGTAGAACACGTGGTCCCAGCAGTGATTTG GTGTACCGGACATACACCGAGTGGGAGCCCTTTGGGAGGTAGGTGACAGA CGAACCGTGGCCACTCATCTTGTTGCGGTGTCTCAGGCCAGACGCGAGGC CTGTGGCCACAGATAAATACCGTAGAGAGTTGCGTAGCTTCGCCTCGTGT AAATTGATTTGGCGGTGCCCCCTGCCTTTCCTCGCGAAGGTGTCCTGGCG GAACCGCTTGCTGGTGGGCACGGACTGGGTCAAGACCAAGATATTCGGCC GGGACATCACCCGGCTCTAGAAATAAGAAAAGGCTCGTGTTCTCGAGTCT ACATGAAGAAAACGGTCTGTCCTATCTAGACCACTCACGTCCTACGCATA GAACATCGTGTGCTCATATTGAATCTAGGCTAGTCTAGTGGAGGTGTCGT TCTTGGCTAGCTTCAATGCAACAGTCTTCCTGCTGGTCAGATAGACTGTT GTACTACTCTTTGTTGTTCCTTGAACAGGCAGCCTCGCACCGTAGAAGTT GCCAGTCCCCTTTCGGACGACAGAACGCTATAATTTTAGGGCTCATTACC GATTATGGGGCCATTTTTTCCCGTACACCGCAAACACGTTGCTATGCACC GTATGGTATTTCCTTGCTCCCCAATATATGAGAACCAATGGCGTTGGGTT GCGAAGCAAAGTGCATGTGCCGTGTAATGTCGCCACTCGCGAAAGCAATA CCGATGTGAAGGCACGCAGCAAGACGGGGGGCCCTTCGTCCTTACCTCCT AGAGTGGATTTCGGTTTGACCAGACAGAGGCCACCACTGGCGTTTCAAGG ACACGCACTAGCCAGCTAGTTTAGTCTATTGGGAGGACCTTGTTTATTTT TCTATATTTTTTTTTCCGCGTGTTTCGCTTATTCTCTCTTGGGTAGATAC CGTACACCTACCGTTTCCCGTACCGTTTCCCGTTCTTTTGCGGTTGAGGC AGGCACATGATGCAAGCACGGCATCCATGGTTGTCGCCGTACGTTTGAAG GATTTAAGGATCTTTCACATCAAGCTTTTCAACGTCGGGACTGCCGACGA ATTTGCTTGGTGCTCATTAAGATCCATTGCGGGACTGACTCACTGTTGTA TACTGCAGAAAGAGCACCGTATCATACGTCCACCTGAGCACTCGTGTGGG AGGTTGGAAAGCTTCCTGGAGGAATAAATTACCCACAAGATTGAATGCAG CTTCGTGGTACGCCCGCCCGTGGGAGATGAATCTGGAATTGCTCGCATGC TTGTGTCTACTTTGTTTGGCTCAAACCCTGGTCTTCCACCGGGACGGGAC GGCAGGTGCTATTATGTAGCGAGAGAGACGGTTTCTTCGTTAATGTCTTG GTCCTATAGCTGCAGGCAGGCGTGTGTGTGTCTCCGCGGTGAGATGTGTG CAGGAGGTTACGGGGTGCGCCGTGAAGGCTTTTCCTTGGCGTGTAGCGTG CCACAGAGGGAGGGCGATAGAAGGATAGGAGAGATAGGCGGTGTCGGAGA AGGATGTTTGGGGTTGCCGTTGCTATAGGCTATGTATTCCTCTGTCGCGA GTTACAAGAACCGATTGGTTTTGATCGCGGGGTACGCTTACAAGTTGTAG GTCGGTGTAGAACTGATGAAATCGAATCGACTTGCCGCTCCCGCGCCTTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1437:6321..15570-

>mRNA_Ecto-sp13_S_contig1437.3368.1 ID=mRNA_Ecto-sp13_S_contig1437.3368.1|Name=mRNA_Ecto-sp13_S_contig1437.3368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1356bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1437:6321..15570- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGCGGCATCTGCGGTCGGGACGGTGGAGTACCGCTCCATCACAGA
GCCCATCCGTAAGGTTAATTCTGAGGCAAACTACCTGGAGGCCACGTGCA
CGGGCATTGACGTGGCCCAGAAAACCATCACCTGCGAGAACGTGGTCTGT
GAGGGTACCACTTGCACCATAGAGGACTTCGAGTTGCCGTACGACTACTT
GGTGGTGTCTGTCGGAGCCACTACCAACACCTTCAACACCCCGGGCGTCA
TGGAACACTGCATCTTCCTTAAGCAAGTCCAAGATGCTCAGAAGCTCAGA
AAGGCGATCGGCAACTGCTTCGAGCGAGCCAACCTGCCGACGGTGACGGA
GGAGCAGAGGGTCGCGGCCCTCACCTTCGCCATCGTGGGGGCCGGGCCCA
CCGGAGTGGAGTGCTGCGCAGAGCTCAGAGATTTCATCGAAGAGGAGGGG
CCGCGATTCTACCCGCACCTGCTCAAGTACGTCAGGATCAAGCTCATCGA
AGCCAGCGACAAGGTTTTGTCGGTGTTCGACGGTGCCCTGCAGAAGGCGG
CGGTCTCCAGTCTCACCGAGCGGTCCACCAAGCTCATCGACGAAGGCTTC
ATCGAGACGGAGATGACTGAGGTGCTGCTAAAGGTGGGCGTGAAGGCCGT
CACCGGCACCCAGCTCGAGCTGTCGGATGGGTCCAACATTCCTTACGGGC
TCGCGGTCTGGGCGGCCGGAAACGGTCCGTTGCCCCTCGTGCTTGACCTC
ATCCAGGGGGTGGAGGAGCAAAAGGAAAAGGCCGCATGGGGCAGGGGGCG
GCTGGTGACGGATGACTGGCTTCGTCTCCTCGGCGCCCCCTCGGTGTTCG
CCTTGGGTGACTGCGCCGTCATCAACGACAAGCCTCTCCCGCAAACGGCA
CAGGTTGCTTCGCAGCAAGGGACGTACCTGGCGCGCCTATTCTCTAGAGG
GTTCGAGTTTTCCGCCACGGTACCGCAGAAGAACACCGACAACGAGGGAG
TCGAAGCGGCTGCCAGGGGCTCCGCAGCATCATCCGACGGATCAGACACC
CCCCTCGGCGAGGACGGCGGAGAGAAGGTGCCTCTCTCCGAGAAGCTGGG
ACTGAGCATCGTCAAGGGGAAGTTCGCCAAGCCCTTCCAGTTCCTCAACC
TGGGCATCCTTGCCTACACCGGCGCTGGCGGGGCGCTGGCCCAGGTCCAG
GTTGGCAAGGAATCGGTCAAGAGCACGGGGGCCACCGGCTACCTTCTGTG
GCGAAGCATTTACCTCAGCAAGCAGGTGTCCTGGCGGAACCGCTTGCTGG
TGGGCACGGACTGGGTCAAGACCAAGATATTCGGCCGGGACATCACCCGG
CTCTAG
back to top