prot_Ecto-sp13_S_contig1437.3367.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1437.3367.1
Unique Nameprot_Ecto-sp13_S_contig1437.3367.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length417
Homology
BLAST of mRNA_Ecto-sp13_S_contig1437.3367.1 vs. uniprot
Match: D8LQI7_ECTSI (BIG1, ArfGEF protein of the BIG/GBF family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI7_ECTSI)

HSP 1 Score: 654 bits (1687), Expect = 2.540e-214
Identity = 385/419 (91.89%), Postives = 389/419 (92.84%), Query Frame = 0
Query:    1 MPPIASAADASTLTTAEEGRGNXXXXXX-PAWIDTARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SESSWGELQDARVDGGGAAESSDVPGAVGNDETNAEKTEG-GAADSEGQKGEGPGPEEGDGDEKKRGGVVPEAELETPPPAAAEGAVVDDGDVVMVSPRGGGSGDGSSASVDFDGATGGVTRHPNLRALMTMLVVSLRMQRLVHWVVRKRCLDGLSANNLVDLLAALEAASVTALKFNRNHNLRRALGRVGFMARGQPVALCPMLEQEVAGYNLLLQTLVVLSRGLDVDSGEPVEGGAGWPFAQACLVQACKCVVLAYADREEHAMGLELTLPGLDHSALVEEVKQTTPLVIFALGSMMYISEEQVRLNVGWMYGCMTRLVRCNSEEVRHHVQQILIYKMGPAMVPQSRAP 416
            MPPIASAAD +TLTTAEEG+GN       PAWIDTAR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX SESSWGELQDAR DGGGAAESSDVPGAVGNDE + EK E  GAADSEG+ GEGPG EEG       GG VPE ELETPPPAAAEGAVVDD DVVMVSPRGGGSG GSSASVDFDGATGGVTRHPNLRALMTMLVVSLRMQRLVHWVVRKRCLDGLSANNLVDLLAALEAASVTALKFNRNHNLRRALGRVGFMA GQPVALCPMLEQEVAGYNLLLQTLVVLSRGLDVDSGEPVEGGAGWPFAQACLVQACKCVVLAYADREEHAMGLELTLPGLDHSALVEEVKQTTPLVIFALGSMMYISEEQVRLNVGWMYGCMTRLVRCNSEEVRHHVQQILIYKMGPAMVPQSRAP
Sbjct: 1758 MPPIASAADDNTLTTAEEGQGNTNAASSSPAWIDTARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESSWGELQDARGDGGGAAESSDVPGAVGNDEADGEKREEWGAADSEGKNGEGPGREEGXXXXXXXGGGVPEVELETPPPAAAEGAVVDDADVVMVSPRGGGSGHGSSASVDFDGATGGVTRHPNLRALMTMLVVSLRMQRLVHWVVRKRCLDGLSANNLVDLLAALEAASVTALKFNRNHNLRRALGRVGFMASGQPVALCPMLEQEVAGYNLLLQTLVVLSRGLDVDSGEPVEGGAGWPFAQACLVQACKCVVLAYADREEHAMGLELTLPGLDHSALVEEVKQTTPLVIFALGSMMYISEEQVRLNVGWMYGCMTRLVRCNSEEVRHHVQQILIYKMGPAMVPQSRAP 2176          
BLAST of mRNA_Ecto-sp13_S_contig1437.3367.1 vs. uniprot
Match: A0A835YNY5_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 6.490e-25
Identity = 80/223 (35.87%), Postives = 111/223 (49.78%), Query Frame = 0
Query:  189 PNLRALMTMLVVSLRMQRLVHWVVRKRCLDG-LSANNLVDLLAALEAASVTALKFNRNHNLRRALGRVGFM-ARGQPVALCPMLEQEVAGYNLLLQTLVVLSRGLDVDSGEPVEGGAG----WPFAQACLVQACKCVVLAYADREEH-----AMGLELTLPGLDHSALVEEVKQTTPLVIFALGSMMYISEEQVRLNVGWMYGCMTRLVRCNSEEVRHHVQQI 400
            PNL ALMTMLVV LR+  L+  ++ +    G LS  NL  L+ ALEA++    +FN +  LRR  G  GF+ A G P A C ML QE A Y  LLQ L  LS     +S  P    A     W  A   L + C+ +V  Y+ RE       A G +    G D   + + +   TP+V+ AL  M  +S+ Q+     W+Y  +  L+ C+S +VR  V  +
Sbjct: 2213 PNLDALMTMLVVGLRLLPLIQALMTQHARAGELSDANLATLVDALEASAAACRRFNNSFALRREFGARGFLTADGAPAAACTMLRQEFASYATLLQCLGALSGTGTTNSPPPQATAAAAAPLWSQAAVRLGRLCRVIVTGYSMRERALKDTIARGADAAAAGSDAQLMAQALHAMTPVVVEALRVMQRLSDAQLTTGRQWVYAALVGLITCDSADVREQVHAL 2435          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1437.3367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQI7_ECTSI2.540e-21491.89BIG1, ArfGEF protein of the BIG/GBF family n=2 Tax... [more]
A0A835YNY5_9STRA6.490e-2535.87SEC7 domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000462CDP-alcohol phosphatidyltransferasePROSITEPS00379CDP_ALCOHOL_P_TRANSFcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1437contigEcto-sp13_S_contig1437:297..4651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1437.3367.1mRNA_Ecto-sp13_S_contig1437.3367.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1437 186..5717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1437.3367.1 ID=prot_Ecto-sp13_S_contig1437.3367.1|Name=mRNA_Ecto-sp13_S_contig1437.3367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=417bp
MPPIASAADASTLTTAEEGRGNNNAASSPAWIDTARPPTEDGSPPSSSGE
SSSSSSNDGNSARREESESSWGELQDARVDGGGAAESSDVPGAVGNDETN
AEKTEGGAADSEGQKGEGPGPEEGDGDEKKRGGVVPEAELETPPPAAAEG
AVVDDGDVVMVSPRGGGSGDGSSASVDFDGATGGVTRHPNLRALMTMLVV
SLRMQRLVHWVVRKRCLDGLSANNLVDLLAALEAASVTALKFNRNHNLRR
ALGRVGFMARGQPVALCPMLEQEVAGYNLLLQTLVVLSRGLDVDSGEPVE
GGAGWPFAQACLVQACKCVVLAYADREEHAMGLELTLPGLDHSALVEEVK
QTTPLVIFALGSMMYISEEQVRLNVGWMYGCMTRLVRCNSEEVRHHVQQI
LIYKMGPAMVPQSRAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000462CDP-OH_P_trans