prot_Ecto-sp13_S_contig1435.3358.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1435.3358.1
Unique Nameprot_Ecto-sp13_S_contig1435.3358.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length323
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1435.3358.1 vs. uniprot
Match: D7G2S6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S6_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 9.230e-61
Identity = 178/285 (62.46%), Postives = 198/285 (69.47%), Query Frame = 0 
Query:    1 MEVLVTEKDEKFAKMFDTRTKNQSKQGGIAGDDINRSRRS--MAELAKHLSSITPKTGVSSTAVPGGGTKLRPAHGLDQHDGGVNIQSATRGPNGATETHPLSPGRQGRSSTYKDRSDSRSGXXXXXXXXXXXXRDRDRGCHRSGSYGRYGRGRYRSPDSSRGRHGSRPRDGGGWSKGVSRXXXXSHYRSDHRHYAGRHEDDERRYRGRYGDFRYSRSRSGSPHSRLHGRRRDSRHRPYHRQXXXXXXXXXXXXXXXXXXXXXXXGRSPSRQRRSLRDTPRDTGG 283
            MEVL+ EKD+K+  ++++RTK QS+QG  A  D+ ++      AELAKHL S TP TG  STAVPG GTK+RPAHGLDQH+GGVN QSAT GPNGATET PLSPGRQGRSSTY++RSDSRS XXXXXXXXXXX  D DRG HRS                    HGSRPRDGGG  KGVSR    S  RS+                      RYSRSRSGS HSR++G RRDSRHRP+HRQXXXXXXXXXXXXXXXXXXXXXXX     RQRRSL+DTPRDT G
Sbjct:   95 MEVLLAEKDKKWDALYNSRTKKQSRQGERA--DVRKANDDALQAELAKHLPSKTPNTGGPSTAVPGDGTKMRPAHGLDQHEGGVNSQSATLGPNGATETPPLSPGRQGRSSTYRERSDSRSXXXXXXXXXXXXSPDGDRGRHRSXXXXXXXXXXXXXXXXX---HGSRPRDGGGRRKGVSRRYSRSRSRSNXXXXXXXXXXXXXXXXXXXEYSRYSRSRSGSRHSRINGSRRDSRHRPHHRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRRSLKDTPRDTRG 374
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1435.3358.1 vs. uniprot
Match: D7FHA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA5_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 2.620e-48
Identity = 119/189 (62.96%), Postives = 125/189 (66.14%), Query Frame = 0 
Query:   96 ETHPLSPGRQGRSSTYKDRSDSRSGXXXXXXXXXXXXRDRDRGCHRSGSYGRYGRGRYRSPDSSRGRHGSRPRDGGGWSKGVSRXXXXSHYRSDHRHYAGRHEDDERRYRGRYGDFRYSRSRSGSPHSRLHGRRRDSRHRPYHRQXXXXXXXXXXXXXXXXXXXXXXXGR---SPSRQRRSLRDTPRDT 281
            ET PLSPGRQGRSSTY +RSDSRSGXXXXXXXX    RD DRG HRSGSYG                HGSRPRDGGG SKGVSR    S  RS+ RHYAGRHEDDERRY+GRY  FRYSRSRSGSPHSRL+G  RDSRHRP+HRQ                            SPSRQRRSL+DTPRDT
Sbjct:    2 ETSPLSPGRQGRSSTYGERSDSRSGXXXXXXXXRSRSRDGDRGRHRSGSYGXXXXXXXXXXXXX---HGSRPRDGGGRSKGVSRRYSRSRSRSNRRHYAGRHEDDERRYQGRYEYFRYSRSRSGSPHSRLNGSSRDSRHRPHHRQRSDSRPRYCRHPSSYGHYGHNEWYSRECSPSRQRRSLKDTPRDT 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1435.3358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2S6_ECTSI9.230e-6162.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHA5_ECTSI2.620e-4862.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1435contigEcto-sp13_S_contig1435:4786..6008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1435.3358.1mRNA_Ecto-sp13_S_contig1435.3358.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1435 4511..6924 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1435.3358.1 ID=prot_Ecto-sp13_S_contig1435.3358.1|Name=mRNA_Ecto-sp13_S_contig1435.3358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
MEVLVTEKDEKFAKMFDTRTKNQSKQGGIAGDDINRSRRSMAELAKHLSS
ITPKTGVSSTAVPGGGTKLRPAHGLDQHDGGVNIQSATRGPNGATETHPL
SPGRQGRSSTYKDRSDSRSGRRGGASTYPSRSRDRDRGCHRSGSYGRYGR
GRYRSPDSSRGRHGSRPRDGGGWSKGVSRRYSRSHYRSDHRHYAGRHEDD
ERRYRGRYGDFRYSRSRSGSPHSRLHGRRRDSRHRPYHRQRSYGRPPSSR
HPSSYSHDEWYSRGRSPSRQRRSLRDTPRDTGGSGVVIATAAVGRVDILR
CCPREMAVTTAHDGDDPGRNPA*
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