mRNA_Ecto-sp13_S_contig1034.335.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1034.335.1
Unique NamemRNA_Ecto-sp13_S_contig1034.335.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: D7FR68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR68_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 1.240e-174
Identity = 258/264 (97.73%), Postives = 260/264 (98.48%), Query Frame = 1 
Query:    1 MANFATLESLKKDDEEEKKGNAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAETGGPPGEDGGNERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPPYVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGLRGASITQKLA 792
            MANFATLESLKK DEEEKKGNAYYAGGARGAGRGGSGLNVMGPPP  XXXXXX NGDPHVQEIFRRAETGGPPGEDGGNERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPPYVAFGGDGQTMGASTVAEGAVMTATGAP+ASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGL+GASITQKLA
Sbjct:    1 MANFATLESLKKGDEEEKKGNAYYAGGARGAGRGGSGLNVMGPPPDDXXXXXXGNGDPHVQEIFRRAETGGPPGEDGGNERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPPYVAFGGDGQTMGASTVAEGAVMTATGAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGLKGASITQKLA 264
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: A0A835ZC87_9STRA (SEP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC87_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.570e-64
Identity = 120/210 (57.14%), Postives = 149/210 (70.95%), Query Frame = 1 
Query:  178 VQEIFRRA--ETGGPPGEDGGNERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKG-TDVKLVDKQNEDYVAPP---YVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGLRGASITQKL 789
            VQ+IF+RA  +     GE+G + + ITI MY  GFTV+DGPFRRLDDPAN+ FL+DL  G+VP+EL  G   G+G   VKL D++NEDYV PP   YV FGG+GQTMG+ST    A +   GA E    P VD +QP TTLQIRL DGRR+RA+LN+ HTVR +QA I  EGAG   ++L+ GYPPA ++D SQTL+ AGL GA +TQKL
Sbjct:   59 VQDIFQRASRQEAAEGGEEGADSQ-ITIFMYRQGFTVNDGPFRRLDDPANEPFLRDLGKGIVPRELADGLGKGRGEVHVKLADRRNEDYVPPPTPAYVPFGGEGQTMGSSTAPAAAAIA--GADEVGAPPVVDDAQPVTTLQIRLADGRRLRARLNLSHTVRDVQAFIHSEGAGATPFVLLGGYPPAVITDFSQTLQAAGLAGAQLTQKL 265
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: A0A7S2FCW2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FCW2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.430e-63
Identity = 114/235 (48.51%), Postives = 156/235 (66.38%), Query Frame = 1 
Query:  100 GGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAE----TGGPPGEDGGNERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPPYVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGLRGASITQKLA 792
            GGSGLNV+ P           +GDP ++E+  +A+    +GG  G  G  +RTIT+  Y  GFTVDDGP R L+DPANK F+ ++  G VP EL+  + PG   DV+L DK+ E+YV P Y A+ G GQ++G +T      +      EA+EAP VD ++P   + +RLH+G+R+RA LNM+HT+RH+QA+I+ EGAG   Y+LM+GYPPA L+D SQT+E AGL GA +TQKLA
Sbjct:    2 GGSGLNVIDP------SQASSSGDP-MEELVAKAQAQGASGGEAGSGGAGKRTITV--YANGFTVDDGPLRDLEDPANKKFIMEMMQGRVPTELQDPSAPGD-VDVQLHDKRGEEYVKPAYTAYSGQGQSIGGATEVSAGALAGAADAEATEAPVVDDAKPKAVIAVRLHNGKRIRATLNMNHTIRHLQALISAEGAGAAPYVLMSGYPPAQLTDFSQTIEAAGLNGAQVTQKLA 226
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: D0N5D2_PHYIT (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=D0N5D2_PHYIT)

HSP 1 Score: 207 bits (527), Expect = 8.980e-62
Identity = 129/272 (47.43%), Postives = 167/272 (61.40%), Query Frame = 1 
Query:    1 MANFATLESLKKDDEEEKKG---NAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAETGGPPGEDGGN--ERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPP---YVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLS-DSSQTLEQAGLRGASITQKL 789
            M N   L SL   +++ + G   N YYAGGA   G GGSGL+V+GP            GD HV  I  RA+         G   +    IT Y  GFTV+DGP+R   DPAN+ FL+ L SG VP+ELE G    +  ++ LVDK+ EDYVAPP   Y AF G+GQ+MG++T A  AV+     P  +E P +D  +PSTTLQIRLH+G+R+R  LN+ HTVR + AII    AG   Y L+AG+PP P+S D +QT+EQAGL+GA++TQKL
Sbjct:    1 MVNIVGLSSLNNRNDDREDGDQPNQYYAGGASDRG-GGSGLSVIGP----------GGGDDHVANIIGRAQQDARAAAAAGESTQPRHVITFYREGFTVNDGPYRARSDPANRPFLEALESGHVPQELE-GENRHEPVEISLVDKRQEDYVAPPPPAYTAFSGEGQSMGSTTYAAEAVIQGDAVP--AERPVIDDKKPSTTLQIRLHNGQRLRETLNLDHTVRDLHAIIQLNDAGAQPYTLLAGFPPRPVSTDLAQTIEQAGLKGAAVTQKL 258
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: A0A3F2RLP8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLP8_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.800e-61
Identity = 131/273 (47.99%), Postives = 168/273 (61.54%), Query Frame = 1 
Query:    1 MANFATLESLK-KDDEEEKKG---NAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAETGGPPGEDGGN--ERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPP---YVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLS-DSSQTLEQAGLRGASITQKL 789
            MAN   L SL  ++D++ + G   N YYAGGA   G GGSGL+V+GP            GD HV  I  RA+        GG   +    IT Y  GFTV+DGP+R   DPAN+ FL+ L  G VP+ELE G    +  ++ LVDK+ EDYVAPP   Y AF G+GQTMG++T +  AV+     P  SE P +D  +P TTLQIRLH+G+R+R  LN+ HT+R + AII    AG   Y L+AG+PP P+S D  QT+EQAGL+GA+ITQKL
Sbjct:    1 MANIVGLSSLNNRNDDDREDGAQPNQYYAGGATDRG-GGSGLSVIGP--------GGGEGD-HVANIIGRAQQDARAAAAGGESVQPHHIITFYREGFTVNDGPYRARSDPANRSFLEALERGHVPQELE-GENRNEPVEISLVDKREEDYVAPPPPAYTAFSGEGQTMGSTTYSADAVIQGAAVP--SERPVIDDKKPKTTLQIRLHNGQRLRETLNLEHTIRDLHAIIQLNDAGAQPYTLLAGFPPRPVSTDLDQTIEQAGLKGAAITQKL 260
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: A0A225VY11_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VY11_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.540e-59
Identity = 124/272 (45.59%), Postives = 167/272 (61.40%), Query Frame = 1 
Query:    1 MANFATLESLKKDDEEEKKG---NAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAETGGPPGEDGGN--ERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPP---YVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLS-DSSQTLEQAGLRGASITQKL 789
            M N   L SL +D+++ ++G   N YYAGGA   G GGSGL+V+GP             D HV  I  RA+         G   +    I  Y  GFTV+DGP+R   DPAN+ FL+ L  G VP+ELE G    +  ++ LVDK+ EDYVAPP   Y AF G+GQTMG++T +  AV+   G   A+E P +D  + +TTLQIRLH+G+R+R  LN+ HT+R + AI+    AG   Y L+AG+PP P+S D +QT+EQAGL+GA++TQKL
Sbjct:    1 MVNIVGLSSLNRDNDQREEGEQPNQYYAGGASDRG-GGSGLSVIGP-----------ESDDHVANIIGRAQQDAMAAAAAGESPQPGHVIAFYREGFTVNDGPYRARSDPANRPFLEALERGHVPQELE-GENRNEPVEISLVDKRQEDYVAPPSPAYTAFSGEGQTMGSTTYSAEAVIQ--GDTVAAERPVIDDKKATTTLQIRLHNGQRLRETLNLEHTIRDLHAILQLNDAGAQPYTLLAGFPPRPVSTDLNQTIEQAGLKGAAVTQKL 257
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: A0A3M6VLM0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLM0_9STRA)

HSP 1 Score: 197 bits (501), Expect = 4.920e-56
Identity = 123/274 (44.89%), Postives = 169/274 (61.68%), Query Frame = 1 
Query:    1 MANFATLESLKKDDEEEKKG-----NAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAETGGPPGEDGGN--ERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPP---YVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLS-DSSQTLEQAGLRGASITQKL 789
            M N   L SL   ++++++      N YYAGGA   G GGSGL+V+GP           NG+ HV  I  RA+         G+  +    IT Y  GFTV+DGP+R   DP+N+ FL+ L  G VP+ELE G    +  ++ LVDK+ E+YVAPP   Y AF G+GQTMG+ST A  A++   G  + +E P +D  +P+TTLQIRLH+G+R+R  LN+ H++R + AII    AG   Y L+AG+PP P+S D  QT+EQAGL+GA++TQKL
Sbjct:    1 MVNIVGLSSLNGRNDDDRRQDRDQPNQYYAGGASDRG-GGSGLSVIGP----------GNGNDHVANIIGRAQQDARAAVVAGDSTQPRHVITFYREGFTVNDGPYRARSDPSNRLFLEALEQGHVPQELE-GENRNEPVEISLVDKREENYVAPPPPAYTAFSGEGQTMGSSTYAAEAMIQ--GDAQVTERPVIDDKKPTTTLQIRLHNGQRLRETLNLDHSIRDLHAIIRLNDAGTQPYTLLAGFPPRPVSTDLDQTIEQAGLKGAAVTQKL 260
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: F0WZW6_9STRA (Uncharacterized protein AlNc14C446G11707 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZW6_9STRA)

HSP 1 Score: 192 bits (488), Expect = 6.990e-56
Identity = 116/272 (42.65%), Postives = 160/272 (58.82%), Query Frame = 1 
Query:    1 MANFATLESLKKDDEEE---KKGNAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGD--PHVQEIFRRAETGGPPGEDGGNERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPP---YVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLS-DSSQTLEQAGLRGASITQKL 789
            M N  +L SL++DDE +   ++ NAYYAGG    G  GSGL+V+GP           NG+   H+  I  RA+           +    IT Y  GFTV+ G +RR DDP N+ FL+ +  G+VP ELEA     +  D+ L+DK+ E+Y APP   Y AF G+GQ MG +   EG +        A+E P VD  +P TTLQIRLH+G R+++ LN+ HT+R + AII   G+G   Y+L+ G+PP PL  +   T+EQAGL+GA++TQKL
Sbjct:    1 MVNIVSLSSLRRDDENDEDHRQPNAYYAGGTHHGG--GSGLSVIGP----------GNGERADHISSIIARAQAMSNSESGASAQPNHVITFYRNGFTVNGGAYRRRDDPENRPFLEAIEQGMVPMELEADDR-SQHVDISLIDKRQEEYQAPPPPQYTAFSGEGQAMGDAASGEGTIFNRVNV-SAAERPVVDDKEPVTTLQIRLHNGTRLQSTLNLAHTMRDVHAIIEINGSGDQPYILLGGFPPRPLIVNLEDTIEQAGLKGAALTQKL 258
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: H3HCQ5_PHYRM (Peroxin-1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ5_PHYRM)

HSP 1 Score: 203 bits (517), Expect = 8.170e-55
Identity = 129/274 (47.08%), Postives = 168/274 (61.31%), Query Frame = 1 
Query:    1 MANFATLESL--KKDDEEEKKG---NAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAETGGPPGEDGGN--ERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPP---YVAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLS-DSSQTLEQAGLRGASITQKL 789
            M N   L SL  + DD+E + G   N YYAGGA   G GGSGL+V+GP            GD HV  I  RA+         G   +    IT Y  GFTV+DGP+R   D AN+ FL+ L  G VP+ELE G    +  ++ LVDK+ EDYVAPP   Y AF G+GQTMG++T A  AV+    A  ++E P +D  +P+TTLQIRLH+G+R+R  LN+ HT+R + AII    AG   Y L+AG+PP P+S D +QT+EQAGL+GA++TQKL
Sbjct:  827 MVNIVGLSSLSNRSDDDERQSGDQPNQYYAGGATDRG-GGSGLSVIGP----------GGGDDHVANIIGRAQQDARAAAAAGESTQPRHIITFYREGFTVNDGPYRARSDAANRPFLEALERGHVPQELE-GENRNEPVEISLVDKREEDYVAPPAPAYTAFSGEGQTMGSATYAAEAVIQGDAA--SAERPVIDDKKPTTTLQIRLHNGQRLRETLNLDHTIRDLHAIIQLNDAGALPYTLLAGFPPRPVSSDLAQTIEQAGLKGAAVTQKL 1086
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BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Match: A0A7S2RQY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQY7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.400e-54
Identity = 118/264 (44.70%), Postives = 163/264 (61.74%), Query Frame = 1 
Query:    1 MANFATLESLKKDDEEEKKGNAYYAGGARGAGRGGSGLNVMGPPPXXXXXXXXXNGDPHVQEIFRRAETGGPPGEDGGNERTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPPYV-AFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGLRGASITQKL 789
            MA  A L+ L K+ E+E K N YYAGG    G GGSGLNV+GP             DP+   I   AE        GG E    IT+Y GGF VDDGPFR  +DPAN+ F++ +  G VP+EL+   + G    V++ +K +++YVAP  V +F G+GQ++G+     GAV+ A+ A  + ++ EVD S+P+TT+ +RLH G+R+R +LN  H V  + A I REGA G SY+L +G+PPA +++  QTLE+AGL GA ITQ L
Sbjct:   47 MARIAGLKDLGKEGEDEDK-NKYYAGG-NAQGGGGSGLNVIGPEGGAE--------DPY-SGILSNAEP-----MSGGEEAERVITLYQGGFVVDDGPFRSFEDPANQQFIQQMNQGFVPQELQEPGSAGS-VAVRIENKSSQEYVAPKGVKSFSGEGQSIGSKAAEAGAVVNASAA-SSEDSLEVDESKPTTTIALRLHTGKRIRLKLNATHRVGALVAAIKREGADGVSYVLQSGFPPAQITNFDQTLEEAGLTGAQITQTL 292
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1034.335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR68_ECTSI1.240e-17497.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC87_9STRA1.570e-6457.14SEP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2FCW2_9STRA1.430e-6348.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D0N5D2_PHYIT8.980e-6247.43Uncharacterized protein n=19 Tax=Phytophthora TaxI... [more]
A0A3F2RLP8_9STRA3.800e-6147.99Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A225VY11_9STRA1.540e-5945.59Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A3M6VLM0_9STRA4.920e-5644.89Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
F0WZW6_9STRA6.990e-5642.65Uncharacterized protein AlNc14C446G11707 n=1 Tax=A... [more]
H3HCQ5_PHYRM8.170e-5547.08Peroxin-1 n=1 Tax=Phytophthora ramorum TaxID=16432... [more]
A0A7S2RQY7_9STRA1.400e-5444.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1034contigEcto-sp13_S_contig1034:350..6221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score498.4
Seed ortholog evalue2e-138
Seed eggNOG ortholog2880.D7FR68
Model size1061
KEGG koko:K14012
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006914,GO:0006996,GO:0006997,GO:0006998,GO:0007030,GO:0007033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010256,GO:0010498,GO:0010921,GO:0016043,GO:0016236,GO:0019208,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0019941,GO:0022607,GO:0030163,GO:0030234,GO:0031323,GO:0031399,GO:0031468,GO:0032182,GO:0032268,GO:0035303,GO:0035304,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0043666,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051174,GO:0051246,GO:0051336,GO:0051603,GO:0060255,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0098772,GO:1901564,GO:1901565,GO:1901575,GO:1905037
Exons6
EggNOG free text desc.nuclear envelope reassembly
EggNOG OGsKOG2086@1,KOG2086@2759
Ec32 ortholog descriptionSEP domain
Ec32 orthologEc-08_005200.1
Cds size795
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1034.335.1prot_Ecto-sp13_S_contig1034.335.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1034 616..6221 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462524.3135223-UTR-Ecto-sp13_S_contig1034:349..6151681462524.3135223-UTR-Ecto-sp13_S_contig1034:349..615Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1034 350..615 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462524.3264248-CDS-Ecto-sp13_S_contig1034:615..7421681462524.3264248-CDS-Ecto-sp13_S_contig1034:615..742Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1034 616..742 -
1681462524.3398137-CDS-Ecto-sp13_S_contig1034:1519..17051681462524.3398137-CDS-Ecto-sp13_S_contig1034:1519..1705Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1034 1520..1705 -
1681462524.3490922-CDS-Ecto-sp13_S_contig1034:3035..31671681462524.3490922-CDS-Ecto-sp13_S_contig1034:3035..3167Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1034 3036..3167 -
1681462524.3575683-CDS-Ecto-sp13_S_contig1034:3605..37461681462524.3575683-CDS-Ecto-sp13_S_contig1034:3605..3746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1034 3606..3746 -
1681462524.3665411-CDS-Ecto-sp13_S_contig1034:4788..48901681462524.3665411-CDS-Ecto-sp13_S_contig1034:4788..4890Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1034 4789..4890 -
1681462524.3749785-CDS-Ecto-sp13_S_contig1034:6114..62211681462524.3749785-CDS-Ecto-sp13_S_contig1034:6114..6221Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1034 6115..6221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1034.335.1

>prot_Ecto-sp13_S_contig1034.335.1 ID=prot_Ecto-sp13_S_contig1034.335.1|Name=mRNA_Ecto-sp13_S_contig1034.335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp
MANFATLESLKKDDEEEKKGNAYYAGGARGAGRGGSGLNVMGPPPDGEGE
GEGGNGDPHVQEIFRRAETGGPPGEDGGNERTITITMYNGGFTVDDGPFR
RLDDPANKDFLKDLASGLVPKELEAGATPGKGTDVKLVDKQNEDYVAPPY
VAFGGDGQTMGASTVAEGAVMTATGAPEASEAPEVDASQPSTTLQIRLHD
GRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLE
QAGLRGASITQKLA*
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mRNA from alignment at Ecto-sp13_S_contig1034:350..6221-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1034.335.1 ID=mRNA_Ecto-sp13_S_contig1034.335.1|Name=mRNA_Ecto-sp13_S_contig1034.335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5872bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1034:350..6221- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTAACTTCGCGACGCTGGAGAGCCTGAAGAAAGACGACGAGGAGGA
GAAGAAAGGAAACGCGTACTACGCCGGTGGGGCGAGGGGCGCGGGCCGGG
GCGGAAGGTTCGTCTGTAATAACGGTATCTATCCTTGGAAGCATCGATGC
GCCACAGGCTAAGATAATATTTACGCAGCAAGGCTGGTGACCTATTACTA
GTAGCGTCGAAGCAGAGCTTCTGCCGCGAACGCGGTGATCCAAGCTCGAT
CCTGTGTCTTTCAACCCTGGAGAATGATCTTTTTCGAGCAGAGTGCATGT
GTGCAGAGCGGAGGACGGCTGATTTTCGAAGATCATCGGAGAACTGGAGC
ACATTCCGCCGCATTAGGGACATGGGGCATTTTGTGTCAATCCAAAACAT
CTGCTTTTGTTTGGGGGGGGGGGAGGTGATATTGTCCACACTTAGAAGAG
GTTTCAGCCGATGTTGAGCTTTTTTTATGTCCATGCTGGTCATATTTCTG
TCGATTATGATTTTTCTACATGCATGCACATAGATGCACATCAGATGACC
CCGAGAGGGGGCAATACTGAGACCGCTACATAACCAGTAACAATTTCAGG
CAAAACTCTCGACGGCGGTGTCTTTGCCAACAGGCCACCCTTTACGACGC
TTGACACCCTCTTGTGCTTGTGAAAAACCAATCGAGCTCTTAGAGTTGGT
TTGTACTTCGAAGTGGACGCGGACGTTCATCCTTTCCGTATTTTAGTTGT
TCACGTGGGCAGCAGCAGTATAGGTTCGCCGGACGGCACCATCACGTCGT
TGCAGCTTTGTGCTGCGCCTGTGAAGGCAGAGAGAGCGACAAGAAGCGGC
TGGCTTCGCCGCAGTCTGGGAGTCGCCAGGTCATCGTGTAGAATACATCA
ATAGATCTGTATGGCAACGAGACGTGCCAAGCAGCAGTGAACAACGCTTT
GCGAATCAGTCTGGTTGGCGTAGCAATATGCCGACAAGCAGAATAGGTGG
GTGTCCGGCTTAGTCCTCCGCCCTTGTTTTCACGTGATGTGATTGGCTGG
GCTGCCACGAGGCTTATACGATTCTACAACGCCGCTTCCAGACTCTTATT
TTCTCTGGTTCAAACTCTCGAAACATTGGTAGCATCCAGCCGTTTTCTCG
CACGCCATCGACCGCGGTGGTACAATCTCGATCGGGTAGTGTTTGGTATG
CGTTTTGGTGTATGCATGCGGTTTCTCAAGTATATCTGATTCCTGCTGCT
ACTGCTGCTGCTGTTGCTGTGATAGATAATCCTTGGTGTTTAATGCTGCT
CTTTTGCTGTTTATACAACACGCCTCTGCAGCGGGCTAAACGTGATGGGC
CCTCCGCCCGATGGCGAGGGGGAGGGAGAGGGAGGAAACGGCGACCCGCA
CGTGCAAGAAATATTCCGCCGCGCCGAGACCGGGTGAGTATTTTGGTGTT
TTTAGTTTTTTTCTTTTTACTTTCGTCGCGACGATTGGAAGCCTCACACA
GAACCAGCGGGGTCTGGATGGAAGGGTCTCACAGAAAGCATGAGAGTGCA
GCAGTGGTGTGATGGTCGATCGTTCTGGTGTTGAGTCACGGCCGTGAAGG
GTCTCGCGTGAGAGCGTGCAGCAGTGTGGTGGTGGTCGATGCTGGCGAGT
GTCAAAGCAGTCAAGGGTCTCGCAGAGCATGAGGGCGTGCATCAGTGTTG
TGACGGTTGATGCGATCTTACGCTGAGTCCAGCAAAAGTGGACAGTCTTG
ACGTGCGTCGCGCGTTTGCCTCTTGTTCCTGTTCGGCTTGTTGGCGACTG
AATGAGTCTGCTGTAGGAAAAAACGTTAGCTGTCGACAGAGCATTGTTTG
CTTTTGGCTCATGACGTGTTGAGGAGGTGTTTCGCGTGCGATCAAACGAT
GGCCTCCACAAAATCTTGTATATGTTTCGTTGCAGAGGTCCTTATTGCAA
AATCTTACTTCGAAGTATTTCCTTTGTTGATGCAAATCTTACTATATTTA
GTCAGCATACATTACCTTACAGATTGACAACCCGTTCAGGATACGTGACC
ACGGTCGAAAGGGATGTGTGGAAGTCCTTTCAGTGAGTGGAGGGAAACCG
GCTGGAAACTGGGCTTATTTTGAGTTTGTTTCAAGCCTATACACTGAATT
GTACCGGTGATACCAGCTGGTCCTAAGAACAAACGCTTCCAGTTACATTT
TTGTTGTTGTCAAGGTCCAATGCAACACCTCATTATTTGTGGTGAAGGTT
CTTAGCGTGTAATGATATGTCCCCTGTTCCTTAATGCGACTCGCCGAATA
CCTGACGGTGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGCTGAGAAC
CGGGCGTGCTCCGTCCCGGCTTGGTAAGGATGCGAGGTCAATTGTCTAAC
GACTACGGCATGCACGGCTATCAGTACACCCCCCCCCCCTGTTCCGCGCG
CGTGCTTCCCTTCGCGCACAAGCAGTGGCCCGCCCGGCGAGGATGGAGGT
AACGAGCGGACGATCACGATAACCATGTACAACGGAGGCTTCACCGTAGA
CGACGGGCCCTTTCGGCGATTGGACGACCCGGCGAACAAGGACTTCTTGA
AGGACCTCGCCTCGGGGTAATTGCTTTGCCCCGCGCCACGGTGGTTACAG
TTTCTTCAATCGAGTGACGTCACCTGCCCGCCACCCCCCCTTTCTGTTTT
TGCTCTGTTCGCGGTCGAGTTACGCATGATGAAATGCTTCTTGTTCTCTT
TGAGGCGTGCCAGGAGTCCAGTGTCGAAGGGCCTGGAGGCTGCCGCGTCT
ATCAACGGCGGGCGCCACCGACTGTTTGACGTTCCTAGTGTACCCCCCCC
TCCCCCTCCCCGCCGGTAACCTTCGCGTCGATCAATAAGCTTGGTTTCAA
TTCGGGGTACAGGGTCGGGTTAGGGGATAGTGATAGGGATAGGGATACGA
AACCCCCCTCTCTATTTTTCAGAGATTGATAAAAAAAAACTCGCTAAGGT
GGTTCCTCCCCGTTCCACCACCATTTTGTGTCTTGTTAACTTGCGCTGCG
GCAGGCTGGTGCCGAAGGAGCTTGAAGCTGGCGCCACCCCGGGCAAGGGT
ACGGACGTGAAGCTGGTCGACAAGCAGAACGAGGACTACGTCGCACCGCC
TTACGTGGCGTTCGGAGGAGATGGCCAGACCATGGGGTGCGTTGTCTACA
GCAGTTGTTAGTCGAATCGATTACATAAGAATTAGAGAGTTTTTTTTGTG
TGTTTAGATTCCTTCCTTTGTTTGAAATTCCCAAGCTCGGTAGAGCGGCG
GCGGCAACGGCGGAGGCAGCGGCGTCGCCGGTAGCCGCGTCAACACCGCG
CAACATGACAGCAGCAGCGGTGGCTGCTGTCCGCGGCCGCCGTCGCGACA
CCCACCACATCGAATTTGGAAGAAGAATGGTGGGGGACTGACAAACGGAC
GTCCGGGACCTATGAGCGGGCATTACGTTCACCTTGTGGAACTTGTGGAA
CTTGGGGAACTTGTGGAACTTGTGGAACTTGGGGAACTTGTGGAACTTGT
GGTCTTCTCGTGTAACGTGGCGAACCCGTGTGCAAGCACGCCCTGAAAAT
TGCGAGGATGAAGTGGTTCGTTCGACTCGCCGCTAGGTGGTCGGGTTCCG
GTTACACCCCTACAAGTGGAGGCCTTCTTCTCTGACAATATTGTTCCGGT
TTCATAATGTTTTCAGAGCAGAAGGATGGTCGGGGTAACCGGAATCCGAC
CACCGGGCGGCAAGTCGAACTTTTCTTGTCATCTTCTGAGTGTGCTTGCA
CACGGGTTCGGTATATCATGAGAAAGTGAGAAGTTCCACGGGAGAGTTGA
ACATCCCCTGTTTTTTTCCTGTCCCCCACCAATATATGTATTTATTTTTT
TTATTGATGGCGGAATTTTGGTACCGGGTTATCTTCCCCCGTACATTATC
AGACAAGTCTTCATCGAAACCAACATCAAACGAAGAATCGTGCTCGATAA
GAGGGGCACGTTGGTGGTATGCATGTAACGGCAAGGAAGGCCATTGGGCG
AGAGCCTTCGTTGACCCATTCTCCCAACCTCCCAGGGATCCATCGACTAG
TTCGCAGCCGTTGAGAGAACCAGCGGAGTGGAACGATCCTCGGAACGGCG
ATCCGTGTTTCCAGCAGATCTCTACTCTTTCTTTTGAGACAGAGGTGTAC
AGTTTTACATGAACACACGATACCGATACCCAACCTCCGCATGTCCCACC
ATCTGCCGCGAGGACTCTTCCCTCTCGTCATTCCCATGCCAGATCATTTT
CTCAAACGGTGGGCCCGGATTCGCTATCGCCCTTAAGTATCAGGCGGGAA
CGTGGTCGCTTTTACCGGCATGGCAGCCATTTTGCAAGTCTGGGTGCCTA
GTTGTGCCGCATATCGCTACGCAGGGCATATCGTTCAACAGTACTTGTAG
TGGCATGTCGATAAACCGGCCAGCCAACCGCTGCTGCTGTCTGTGTGTGT
GTGTGCACTATCATAGGGCGTCAACGGTGGCGGAGGGTGCCGTGATGACC
GCCACCGGAGCTCCCGAGGCCTCGGAAGCGCCGGAAGTCGACGCCTCGCA
GCCCTCTACGACGCTGCAGATCCGGCTCCACGACGGAAGGCGCGTCAGGG
CGCAGCTCAACATGCACCACACCGTGCGACACATTCAGGCCATCATCGCC
AGGTAGAGTGTGTGCGTTTGATGTAGGTAGCGTACGAGGCCATGTGCACA
CACACAGCCGGTAGCGTAGGTTGCCTAAGGTGCCACACACGCACATCCCT
GGACTGATTTTCGTGGAAGCTCGATAACCTCTTGCAGCGAAGAACATGGA
GGGTGCCCAACAAGTTGCGTCCGTTGGAACCATAACGTCAAGAGCTTTTC
CGAAAACGCGTCGTTTGTGTGTTTCAGGGTCGTGTTGGTTGTCCAGGAGT
CGAGGTTTGAAGATTGGGTGCGAATGCTTGTGGTATTCCACGCACCCTCT
ACAGTACGACATGCGTGTTCATCTCTCTCGCCTTCGTTTGCCGTTTCGAT
GAAGAGGTTTCGGGCGGAAGCCGTATCTCTTTCGTTGCTGCCCCCTGGAT
AGCTCTCAGATTGTCTTTGCGTGAGGCATGTCGGCTTGGCTTATTCATGA
AAAGGCATGGCGTCCTGTGGGCGCTTTTTGGCGTCCTTTCTATTGGTTGT
AGAAGTTGGTCTGTCTAAATCCATCCGATTTCCTGGTGGTTCTTTTTTCG
TTCGCGGTATTTCCTACATGCTTGATCCTGCGTTGAGTGTCAGGCGATGC
TCGTACCTTGCTGTGTTTTCTGTTTTAAGTTTCCGTCCTACGCTGGCATT
AAAAAAAAATTCGCTCCGACTGCCGCCAAACCACAGCAATTCCGAAACAG
TGCTTAAGAAGCTATTTTAGGTGCACTCACGCCATTGTTCCCATTACTAC
CTCGCTTTTTTTTTTTTTTTTGCCATCAGGGAAGGGGCTGGAGGGGGCTC
GTACATGCTCATGGCGGGGTACCCCCCTGCCCCCCTCTCGGACTCGTCGC
AGACGCTGGAACAGGCCGGGTTGAGGGGGGCCTCCATCACCCAAAAGCTA
GCATGAAGCGACGAAGCATCGTGTTGTGTTGTGCAGCAGGCGGCGCTTGG
TTGAGGAGGCTTGCTCGAGCTGGGGCGTGGCCTCCTCCTTCCCTCATGGC
CCAAAGGCATGGACGAACGCATGGCCAACCTAGAAGTTCGCGACGGGTTG
GGAACGTTCGATTGGCGGCTTCGTCCGCCGTGCTTTAACGAGCTACTGTA
GATTCACACCGGTTTTTTGGGGTCGGTGGTTGGCCATGATGCCCGCTGTT
GGCCGTGATGTCCGCTATCGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1034:350..6221-

>mRNA_Ecto-sp13_S_contig1034.335.1 ID=mRNA_Ecto-sp13_S_contig1034.335.1|Name=mRNA_Ecto-sp13_S_contig1034.335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1034:350..6221- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTAACTTCGCGACGCTGGAGAGCCTGAAGAAAGACGACGAGGAGGA
GAAGAAAGGAAACGCGTACTACGCCGGTGGGGCGAGGGGCGCGGGCCGGG
GCGGAAGCGGGCTAAACGTGATGGGCCCTCCGCCCGATGGCGAGGGGGAG
GGAGAGGGAGGAAACGGCGACCCGCACGTGCAAGAAATATTCCGCCGCGC
CGAGACCGGTGGCCCGCCCGGCGAGGATGGAGGTAACGAGCGGACGATCA
CGATAACCATGTACAACGGAGGCTTCACCGTAGACGACGGGCCCTTTCGG
CGATTGGACGACCCGGCGAACAAGGACTTCTTGAAGGACCTCGCCTCGGG
GCTGGTGCCGAAGGAGCTTGAAGCTGGCGCCACCCCGGGCAAGGGTACGG
ACGTGAAGCTGGTCGACAAGCAGAACGAGGACTACGTCGCACCGCCTTAC
GTGGCGTTCGGAGGAGATGGCCAGACCATGGGGGCGTCAACGGTGGCGGA
GGGTGCCGTGATGACCGCCACCGGAGCTCCCGAGGCCTCGGAAGCGCCGG
AAGTCGACGCCTCGCAGCCCTCTACGACGCTGCAGATCCGGCTCCACGAC
GGAAGGCGCGTCAGGGCGCAGCTCAACATGCACCACACCGTGCGACACAT
TCAGGCCATCATCGCCAGGGAAGGGGCTGGAGGGGGCTCGTACATGCTCA
TGGCGGGGTACCCCCCTGCCCCCCTCTCGGACTCGTCGCAGACGCTGGAA
CAGGCCGGGTTGAGGGGGGCCTCCATCACCCAAAAGCTAGCATGA
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