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Homology
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: D7FNG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG6_ECTSI) HSP 1 Score: 1171 bits (3030), Expect = 0.000e+0 Identity = 607/643 (94.40%), Postives = 615/643 (95.65%), Query Frame = 1
Query: 1 MLDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPGPSSMATPEDEEACRLDFDPKASXXXXXXXXQRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLAAADRFGPGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMSTLMASDPRECNALAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATTAVAGRGR-RAAALPRATVCLEAVVNLLQSPVVVEQEPRLTEKCSHLVYKLCSSKDTRVSALNRLRHSSGGSSNAAFFPQALRVALGDSGRSMMMMPPPEAKAEASFGRHCLAWLLKAASIDLRTSCEVQQRARPVAGPPANAP 1926
MLDEGVRRSLTNSG+SFRVLT LTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQ LVPTGTGRQEG IVGG MAKNA+SSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPY LGEKTRYR ASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGG A+PGPSSMATPEDEEACRLDFDPKAS QRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSL ADRFG GGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMM+TLMASDPRECNALAEAYT CLAADGL LGGNNL SLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATTAVAGRGR AAALPRA+VCLEAVV+LLQSPVVVEQEPRL EKCSHL+YKLCSSKDTRVSALNRLRH SGGSSNAAFFPQALRVAL DSGRSMMMMPPPEAKAEASFGRHCLAWLLKAA+IDLRTSCEVQQRARPVAGPPANAP
Sbjct: 1 MLDEGVRRSLTNSGNSFRVLTTLTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQ-LVPTGTGRQEGVIVGGGMAKNANSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYTLGEKTRYRGASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGSADPGPSSMATPEDEEACRLDFDPKASSSSS----QRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLTPADRFGAAAGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMATLMASDPRECNALAEAYTCCLAADGLGLGGNNLPSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATTAVAGRGRGAAAALPRASVCLEAVVSLLQSPVVVEQEPRLAEKCSHLLYKLCSSKDTRVSALNRLRHPSGGSSNAAFFPQALRVALADSGRSMMMMPPPEAKAEASFGRHCLAWLLKAAAIDLRTSCEVQQRARPVAGPPANAP 638
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A6H5L6F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F6_9PHAE) HSP 1 Score: 610 bits (1572), Expect = 1.600e-212 Identity = 336/460 (73.04%), Postives = 343/460 (74.57%), Query Frame = 1
Query: 247 MAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPGPSSMATPEDEEACRLDFDPKASXXXXXXXXQRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLAAADRFG--PGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRER----------------------------------------------------------------------------YIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMSTLMASDPRECNALAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGAL 1392
M +NA S S SQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYR ASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPL GEGGG NPGPSSMATPEDEEACRLDFDP+A Q R + E GGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLML GGRK+EADGGSLA+ADRFG G G GLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRER YIEYDGNMVIPLLSTSVLLSCGRNLPAGNMM+TLMASDPRECNALAEAYTYCLAADGLSLGGNNL SLE MLCPPN EADGDFMTLD ALIGAGTG RNWGGDEGA+
Sbjct: 1 MVRNALSPSASQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRGASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLAGEGGGVNPGPSSMATPEDEEACRLDFDPRAPSSSSSSS-QVRLTVMSFSAALE----GGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLLGGRKNEADGGSLASADRFGVGAGAGSGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERCVLLSLSMLEAASEREKAFVDQWRARVSAGGLDDYDEDGGRGGXXXXXXXXXGTLAPPAYLGNLLSEQNTIAVVARYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMATLMASDPRECNALAEAYTYCLAADGLSLGGNNLPSLEEMLCPPNREADGDFMTLDTALIGAGTGERNWGGDEGAV 455
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: UPI001C728B15 (nuclear pore complex protein Nup205 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C728B15) HSP 1 Score: 96.3 bits (238), Expect = 9.300e-17 Identity = 59/189 (31.22%), Postives = 96/189 (50.79%), Query Frame = 1
Query: 4 LDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRY 564
LDE R +L+ + + L L+TC V SLK ++ +AA A P+ + IW +E AQ ++PT S + P G+ E+E+VE+R YPVT G L+ L+ H P NLG TR+ GI+PY+ ++L CVL+ + + GE+W++ A +++ +++ Y
Sbjct: 604 LDEIARITLSENTHYVPTVVIL-GLITCSVPASLKAALLNCMAAFATSPDISLNIWQGLEMAQ-VIPT-----------------VKSVAVYHPSGILMELEEVETRMEEYPVTRGMLTLLDSLLNHPFPNNLGHATRH---PGIEPYLEFVLDCVLLKCNSRAYKNPGEKWKIMALCYKILEKVMKSY 770
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A6P8H800_ACTTE (nuclear pore complex protein Nup205-like n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H800_ACTTE) HSP 1 Score: 94.0 bits (232), Expect = 4.940e-16 Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 1
Query: 7 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRY 564
DE R +L S ++ + +L L++C + LKG I LAA AK PE A +W+ +E +Q LV T +Q G +Q RG+ E+ ++E+R TYPVT F LI+EL +P LG R G +PY+AYL V + + D+ E+W VA V++V+ LL Y
Sbjct: 608 DETARITLCES-QTWLPVASLFGLLSCTIDIRLKGCILNTLAAFAKSPEIASSMWLTLELSQILV---TVKQPG--------------QTTQDRGIQVELNEIEARSETYPVTRAFLRLIRELTDIPIPATLGAGYR---VPGFEPYLAYLRDDVFLKFNSRGYQDSKEKWEVACGVVEVLFKLLDDY 774
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: UPI001F0382E8 (nuclear pore complex protein Nup205-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0382E8) HSP 1 Score: 92.8 bits (229), Expect = 1.130e-15 Identity = 64/197 (32.49%), Postives = 95/197 (48.22%), Query Frame = 1
Query: 4 LDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLV---PTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRYPLTGE 579
+DE R +L + S+ LT++ L+ C + SLK I + LAA A ET +W +E +Q L P G QE G L AE+E++ESR TYP T F L+ L + +P NLG R G +PY+ +L VL+ + D E+W+VA+ VLQ+ + LL ++ + E
Sbjct: 600 MDETARIALCEN-PSWVPLTSMFGLLGCSIPTSLKACILETLAAFAMSQETTASMWQSLETSQILQTVKPAGQALQESG--------------------LLAELEEIESRNETYPETRAFMTLLANLTAYPVPANLGAGYR---VPGFEPYLEFLRDSVLLKFKARAYLDPNEKWQVASGVLQIFVKLLEQFEPSAE 772
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: W5JBM6_ANODA (Nuclear pore complex protein Nup205 n=2 Tax=Nyssorhynchus TaxID=44543 RepID=W5JBM6_ANODA) HSP 1 Score: 92.0 bits (227), Expect = 1.970e-15 Identity = 57/173 (32.95%), Postives = 90/173 (52.02%), Query Frame = 1
Query: 58 LTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQL--VPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIPEL--RFADAGERWRVAARVLQVMLTLLRRY 564
L+ L L++C V LK I + LAA A + E A ++W +E+ Q + VPT +SN Q RG+ +E+E+VESR YP+T+ + L++ +P NLGE R A GI PY++Y++ VL+ + D E+W++ + LQ++ LR Y
Sbjct: 655 LSVLVGLISCSVPIQLKAEIVRTLAALANNFENALQLWSNLEDVQIISTVPT--------------------TSNFQTRGVRSELEEVESRNEAYPLTQAMLDFLAVLMRTTVPENLGEGKR---APGIAPYLSYVIDVVLLQVFSRNYKDPAEKWQLTQKCLQILHCFLRDY 804
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A182V211_ANOME (Uncharacterized protein n=16 Tax=Cellia TaxID=44534 RepID=A0A182V211_ANOME) HSP 1 Score: 90.9 bits (224), Expect = 4.510e-15 Identity = 57/181 (31.49%), Postives = 95/181 (52.49%), Query Frame = 1
Query: 7 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVM 543
DE R +L S D + L L L++C V LK I + LA+ A E A ++W +E++Q + S+SN + RG+ +E+E+VESR T+P+T+ L+ L+ +P +LGE +R A GI PY++Y++ VL+ + D E+W++A + LQ++
Sbjct: 604 DELSRIALCES-DKWAPLNVLVGLISCSVPIQLKAEIVRTLASLAGSLENAIKLWHNLEDSQ------------------IVNTIPSTSNFKTRGVISELEEVESRNETFPLTQAMLDLLSSLMSTAIPDDLGEGSR---APGIHPYLSYVVNTVLLRLFSRNYKDGAEKWQLAQKCLQIV 762
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A210R3N4_MIZYE (Nucleoporin 205 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210R3N4_MIZYE) HSP 1 Score: 89.4 bits (220), Expect = 1.350e-14 Identity = 135/553 (24.41%), Postives = 216/553 (39.06%), Query Frame = 1
Query: 76 LVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPGPSSMATPEDEEACRLDFDPKASXXXXXXXXQRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLAAADRFGPGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPL---LSTSVLLSCGRNLPAGNMMSTLMASDPR-ECNA-LAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLG--LVGPSATTAVAGRGRRAA---ALPRATVCLEAVVNLLQSPVVVEQEPRLTEKCSHLVYKLCSSKDTRVSALNRLRHS 1698
LVTC + LK +++ LAA A+ P+ A +W +E Q++PT + +K A G+ E++++ESR YP+ +GF LI L +P LG R A G PY+ +L V + + + GE+W +AA VL ++ LLR + + PED ++ + KS G+ +L +L R ++++L D + L+ AL + L R E +L AD+F + ++ G A+ + + L + PD +YI + +P + +VL R P + L +D + CN L + CL D N + + LD A + G + R +L ++L ++Q PNLAHLLLG L P + T + +G + L LE V P + + P+L E C L++KLCS+KDT L LR S
Sbjct: 624 LVTCSIPSPLKAELFRTLAAFARSPDIAASLWQTLE-VSQILPT------------IQSKGAG--------GIQVELDEIESRNEEYPMIQGFLALIDTLTDIPVPAGLGAGLR---APGFDPYLLFLRDSVFLRFNSRAYKNPGEKWEIAASVLNILSKLLREHEIV---------------PEDFVDELIEVQSGGTVVAN--------KSAGHTLLVYMLNDSSFLRMILRIL-------DDVINQLET--YTDIPGKALMERTALLCLRMIEY---TLEKADQF-------VSACRETG-ASIMVVSMDRLLLGINPRTGKPDHLVNIAKYITF--GTFLPYHAQAAMTVLYRVCRTAPIQTKLLNLFTADQKTSCNLDLLHGFVECLEVDEAEEVVQNRV-----------------VQLDEAAVEVNVLGN-------VRNSTRQNLLRIILHCLDQPSPNLAHLLLGFDLQKPVSKTNLQDQGILGSPKTCLHAILSILEQGVGSSVGPSCLHETPQLAELCYKLIFKLCSNKDTSAPTLRYLRTS 1083
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A182S6P3_9DIPT (Uncharacterized protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182S6P3_9DIPT) HSP 1 Score: 88.6 bits (218), Expect = 1.980e-14 Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 1
Query: 7 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRY 564
DE R +L S D + L L L++C V LK I + LA A E A ++W +E++Q + S+SN + RG+ +E+E+VESR +P+T+ L+ L+ +P +LGE +R A GI PY++Y++ VL+ + D E+W++A + LQ++ + +
Sbjct: 90 DEMSRIALCES-DKWAPLNVLVGLISCSVPIQLKAEIVRTLATLAGSLENAIKLWHNLEDSQII------------------NTVPSTSNFKTRGVISELEEVESRNELFPLTQAMLDLLAALMSTAIPDDLGEGSR---APGIHPYLSYVVNTVLLRLFSRNYKDGAEKWQLAQKCLQIVYMFVNSF 255
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: UPI000A2A5FF9 (LOW QUALITY PROTEIN: nuclear pore complex protein Nup205-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5FF9) HSP 1 Score: 87.8 bits (216), Expect = 4.060e-14 Identity = 62/185 (33.51%), Postives = 93/185 (50.27%), Query Frame = 1
Query: 7 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLL 555
DE R +L S ++ + +L L++C + LKGSI LAA AK PE A +W +E +Q LV T +Q G Q RG+ E+ ++ESR + PVT F L+++L +P +LG R G +PY+ YLL V + + D E+W+V+ +VL+V LL
Sbjct: 607 DETARIALXES-QAWLPIASLFGLLSCPIDIRLKGSILDTLAAFAKSPEIAASLWHTLELSQILV---TVQQPGQAA--------------QDRGIQVELNEIESRSESXPVTRSFLGLLKDLTDIPIPXSLGAGYR---TPGFEPYLMYLLNEVFLKFNSRGYQDVEEKWQVSCQVLEVFFKLL 770
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 1181.8 |
| Seed ortholog evalue | 0.0 |
| Seed eggNOG ortholog | 2880.D7FNG6 |
| Preferred name | NUP205 |
| Model size | 1929 |
| KEGG ko | ko:K14310 |
| KEGG TC | 1.I.1 |
| KEGG Pathway | ko03013,map03013 |
| KEGG Module | M00427 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000132,GO:0000226,GO:0000278,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006999,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007163,GO:0007275,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009605,GO:0009628,GO:0009629,GO:0009790,GO:0009792,GO:0009794,GO:0009987,GO:0010389,GO:0010467,GO:0010564,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0017038,GO:0017056,GO:0022402,GO:0022607,GO:0030010,GO:0031090,GO:0031224,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034622,GO:0040001,GO:0040011,GO:0042330,GO:0042332,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044611,GO:0045184,GO:0045995,GO:0046822,GO:0046907,GO:0046931,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051049,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051292,GO:0051293,GO:0051294,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0051983,GO:0060341,GO:0060623,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:1901987,GO:1901990,GO:1902749,GO:1902850,GO:1903047,GO:1903379,GO:2000026 |
| Exons | 14 |
| EggNOG free text desc. | nuclear pore organization |
| EggNOG OGs | KOG1835@1,KOG1835@2759 |
| Ec32 ortholog description | Nucleoporin Nup186/Nup192/Nup205 |
| Ec32 ortholog | Ec-01_005530.1 |
| Cds size | 1929 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03036 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462765.5530248-CDS-Ecto-sp13_S_contig1432:2946..3021 | 1681462765.5530248-CDS-Ecto-sp13_S_contig1432:2946..3021 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 2947..3021 + |
| 1681462765.5718322-CDS-Ecto-sp13_S_contig1432:3501..3618 | 1681462765.5718322-CDS-Ecto-sp13_S_contig1432:3501..3618 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 3502..3618 + |
| 1681462765.5820258-CDS-Ecto-sp13_S_contig1432:4590..4767 | 1681462765.5820258-CDS-Ecto-sp13_S_contig1432:4590..4767 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 4591..4767 + |
| 1681462765.5919788-CDS-Ecto-sp13_S_contig1432:5515..5683 | 1681462765.5919788-CDS-Ecto-sp13_S_contig1432:5515..5683 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 5516..5683 + |
| 1681462765.6024039-CDS-Ecto-sp13_S_contig1432:6028..6184 | 1681462765.6024039-CDS-Ecto-sp13_S_contig1432:6028..6184 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 6029..6184 + |
| 1681462765.6150804-CDS-Ecto-sp13_S_contig1432:6768..6807 | 1681462765.6150804-CDS-Ecto-sp13_S_contig1432:6768..6807 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 6769..6807 + |
| 1681462765.6253-CDS-Ecto-sp13_S_contig1432:7463..7660 | 1681462765.6253-CDS-Ecto-sp13_S_contig1432:7463..7660 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 7464..7660 + |
| 1681462765.633398-CDS-Ecto-sp13_S_contig1432:8035..8176 | 1681462765.633398-CDS-Ecto-sp13_S_contig1432:8035..8176 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 8036..8176 + |
| 1681462765.6423407-CDS-Ecto-sp13_S_contig1432:8986..9099 | 1681462765.6423407-CDS-Ecto-sp13_S_contig1432:8986..9099 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 8987..9099 + |
| 1681462765.6520708-CDS-Ecto-sp13_S_contig1432:9615..9821 | 1681462765.6520708-CDS-Ecto-sp13_S_contig1432:9615..9821 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 9616..9821 + |
| 1681462765.662162-CDS-Ecto-sp13_S_contig1432:10918..11154 | 1681462765.662162-CDS-Ecto-sp13_S_contig1432:10918..11154 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 10919..11154 + |
| 1681462765.6716871-CDS-Ecto-sp13_S_contig1432:11555..11664 | 1681462765.6716871-CDS-Ecto-sp13_S_contig1432:11555..11664 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 11556..11664 + |
| 1681462765.684575-CDS-Ecto-sp13_S_contig1432:12484..12629 | 1681462765.684575-CDS-Ecto-sp13_S_contig1432:12484..12629 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 12485..12629 + |
| 1681462765.6962934-CDS-Ecto-sp13_S_contig1432:13233..13283 | 1681462765.6962934-CDS-Ecto-sp13_S_contig1432:13233..13283 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1432 13234..13283 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1432.3347.1 >prot_Ecto-sp13_S_contig1432.3347.1 ID=prot_Ecto-sp13_S_contig1432.3347.1|Name=mRNA_Ecto-sp13_S_contig1432.3347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=643bp
MLDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDP
ETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFA
EMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYV
AYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPG
PSSMATPEDEEACRLDFDPKASSSSSSSSSQRRYKSPGYYILREILGQGG
LFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEA
DGGSLAAADRFGPGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPD
WSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMSTLMASDPRECN
ALAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGA
GTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATT
AVAGRGRRAAALPRATVCLEAVVNLLQSPVVVEQEPRLTEKCSHLVYKLC
SSKDTRVSALNRLRHSSGGSSNAAFFPQALRVALGDSGRSMMMMPPPEAK
AEASFGRHCLAWLLKAASIDLRTSCEVQQRARPVAGPPANAP* back to topmRNA from alignment at Ecto-sp13_S_contig1432:2947..13283+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1432.3347.1 ID=mRNA_Ecto-sp13_S_contig1432.3347.1|Name=mRNA_Ecto-sp13_S_contig1432.3347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10337bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1432:2947..13283+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTGACGAGGGTGTCCGGCGATCCCTGACCAACAGCGGCGATAGCTT
CCGGGTTTTGACGGCCTTGACCAATGTGAGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCCGCCGCCCGCTGCTCGCACGTGTGATTGATTGAAAACGT
TCGGTTTGATCGCATGTTTGTCGGGTGTATATTGATGCATGTTTGCCAAC
TATTCGGTGGTGGTATTCAGGCATCGCTGGAGGAATCGATGTAGACGGGC
CCGAATCGTCGTTTTTTTTTTTTTGCCGAATAAGGCAGACATCACATGCA
TCTGGAGTGCTTGTGCGTCAAGCCAAATCTTTGCTTTCGTTCCCATACAC
CTTGTTTGTTTTCACTTGCCGTTATTTCACTATGTTTTTTTTCCGTTTTT
TTTTTTCTTTTGACGATTTTTGTATTCGTTCGCCTTTTTTTTCCCCGTTT
TTTTTTTGTTTATCATGTCCTTGCTTCCTTCCTTCCTTCCTTTTGCGTTG
TTTGGGCATCCGTTGTGTGACTCCTGTGGTACCGACAACAACAAAATGGC
AAAAGCTGGTGACGTGCGGCGTGCGGCCGTCCCTGAAGGGATCGATCTAC
AAGGCCCTGGCGGCGTGCGCCAAGGATCCCGAGACCGCTCGGCGAATCTG
GATTTTCATCGAAGAGGCGCAGGTACAGTAGATAGGCAGAGTCGGTCGAA
AAATGGGACGGCGCTCCTGTCTGTCTATCTGTCTGTCTGTCTGTCTGTTT
TAGTTGCCGGCTGTGGGTCCACCTACTTTTTTTGTGGAGACACTGCTGTA
TGACACAAGTGTGAACGTTCGGCAGTAGCGAGCAGACGATGTTGGTGACC
GCCATATGTACAAAGCGAAACAAAGATGTGTGGAATCTCGCGTGCCACAG
CGATAACTTCGCTGGTGCTGCTGCTACTTGTGGTGCACGTAGAGCGCGTT
GGAAAATTTGCTGCTGCTACTTGAATAGGCTACTGTGTCTGCATTATTCT
GGGGTTGTTGGTGTTATGGTCGCCGCCGTGCTCCCGTGGCATTGGTTCAG
GGAAGGACATGTATGCCCCATCCCCATCCGTTGTTTGGCTGGGGTGACCC
CTCCCTCGTCCCTCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTT
TTTTTTTTTGCCCTTCCTAGTTTTTTGTAAATTCCCGACGTGTTGTCTTC
CTCGCATCGCTGACTGATCCTAGAATCTTTCTCTCCCGATAGTACTGGGA
TCTTACATTGGTTCGTCGGGTGACGCGGTCGATGCGAATCAGGGAACCAC
ACACACAAACCCTTACCTACCCTGTGACTAGAAAAGTGTTGGTGCTTTCT
ATTCCCGCCATGTGTACAAAGACTGGGGTTCTTTCCATTGGTCAGCCCGT
TACTGTAGCGCGGTCGATGCCAATACTACTCAAGAAAAGGATACACACAC
ACACCGCCTCCTACCCTCCTTGTACATCCTTATCCTTCCCCCCCCGCCCC
CCCTGCCCTGGGCCGGCGAAAACCCTGAGTGGATATCGCTCCGTCCCGGC
ATTGTAGGGATGCGAGGTCAGCGGTCTAACGACTACGGCATGCGTTTATG
TGAATACACCCTCCCCGTCCTGCAACCGCCTTTTTGTCGTCGAGCAGCTC
GTGCCTACGGGAACCGGGAGGCAGGAGGGTGGCATCGTCGGTGGCGTCAT
GGCGAAGAACGCCTCCTCTTCCTCCAACTCTCAGCCCCGGGGGCTGTTCG
CAGAGATGGAGCAGGTGGAGTCACGCGAAAGGACGTACCCGGTGACGGAG
GGATTCTGCTGCCTCATTCAGGTCTGTTGCTGCCGCTGCTGCTGCCGCTG
CTGCTACTACTGCTCTTGTGGTTGGGTATTTTGGTTGATAGTTTGGTTGG
TGTTGGTTTTGATTGCGGCGGTAGTGAATGTTGTGTTTTTTTGGCACGGT
TTCACATTAGTTCATGTTTACGTCATTGATTGACTCTTCATTTTGCACTT
GTTTTCGAGCACAACCATCCTGTTGGAAACCGCCCAAGACTTGCTTGCGG
AAGGACGAGAAAAATATCCACGTCTGCTCTCATGACTCGCCGATGTCATA
GTTCCCTCTCTACCCCCCCCCCCCAAAGCAGTTTTCAATGGGCAGTGATA
TTCTGGGTGTCCAGTAGATGTTGTGCGTTGCTTTGGAAAATGGAGATCTA
CTGCTTGCTACACGCACGGAGGTTGAGAATACAGTACTGCTGTTGCTGCG
AGTTACTTGCACATACATTTGGACGCAAATTACTTCGTATGAGGGGCATG
GTTATCCATAATTTTGTGTCGACCGCGTCTTGTTGTCAGCCTTAATTCCT
CAGCTTGTCATTGCTGTCGTAGGTTGCCCTTGTCATACAGCAGCATTACA
CGTGTTTTCTGCGCCTCTTGGCCCTTTTTTTTTTCTCTCCGAGGTTTGGT
TCTTCAACAACAGCCGACGATACGAACAAAGTGCTGAATGATGCACCGCA
TCGCCGCCCCCTTACCGCATCGCCGCCCCCTTTCTAAAATACATGTTTGT
CTTTGTTGGGGACGCACAGGAATTGGTGCAGCACGACCTGCCGTACAATC
TCGGAGAGAAGACGCGCTACCGAGCGGCTTCGGGCATCCAGCCGTACGTG
GCCTACCTGTTGAAGTGCGTGCTCATCCCGGAGCTGAGGTTCGCTGATGC
TGGAGAGAGGTGGAGGGTGGCGGCGAGGGTGCTCCAGGTGCCTGAGGAAG
GGTGGGGGGGGGTGTAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCT
GGGGGGGAGAGAATTGTCGAAAGCTAAGTAATGAAATGTCATGTGTTCCC
CGCAGGGCGTGCGAAGCGATCGAGAGAGAGGAGGGCGAGCGGGGGGGGGG
AGCATGGGACGGTTATGTCACGCCGTTCTCGTGCCGTGGCTGTGCCGTAA
CGTCAATTCATCCAAGAAAAGAAGATGGAGCAAATGCAACTCTTGCTGTA
CCCCACACAAATATCCCGTCTTGACTAAATATCACCCCCCCGCCCGTAAA
ACCCCAACAAAAACAAAAAAACGCATGTGCAGGTGATGCTGACTCTTCTG
AGGAGGTACCCGCTGACAGGGGAAGGCGGTGGCGCCAACCCGGGGCCGTC
GTCGATGGCTACCCCGGAAGACGAGGAGGCGTGTAGACTGGACTTCGACC
CCAAGGCGTCCTCCTCTTCCTCCTCTTCCTCCTCGCAGGTAAGCCCTTTC
TTATTGTTATTCCAGCGCTGTAATATGTGCTACGCAGGTCCCGGCTTTCA
ATGTTTCATTGCTGTATTACGCAGGTTACACTTAATATTTTGTCGTTTCC
TGTAGCACTGCATGTATGCATGCGAACGATGCGTGTCCACGAAAGGCTGT
TGAAAGAGGAAGTTGCTGCTCTTGATTTTTTTTTTTTTTCTGTATCTCAC
GAACACGGGTACAACCCATGCCTCTCGTGTACCGTAGGCACGCTTGTCGT
CTTTGGTTTCTGGTTGCACCAGCCAAAACACTTTGTTAAGGTCCAAGCCC
GCCGAATCGACGGGTATGGGTTTCCTGCTCCGTACGGTAACAGCCCCGGA
GCACTTTCGTGATTTTCATGTCGTACATTGATGCTATCCGTGGTGGGTAT
TTTCACACGTGGGGCCTCCTTCTCGCGGCTGCTGGTTCGTGGGAGGCTGG
CTCCCACAAGCGTCATGGCTCCTCTTGGTAATTTTCTCTCGCTGCTGCCC
TTGGTTCTGCCCCCACCCCCAACCCCACCTTGCCGTCGATGGGTGTCACC
TTGGCTGCGTTTGTTTGGACAGCGGCGGTACAAATCACCCGGGTACTACA
TCCTCAGAGAGGTGAGTCAAAAAGAGCATGTACAGTATTCACGTCGAGTC
GAGGCAAGAAAAAAAGATGGCAATTTGGATCGATGGCGTTATCACTCAAC
CGCCGTGGGAAGAGTTGAGAATTGCATCTTTGCGGGTGCGAACTGCTTAC
AGTATTCGATACCGGTATAGGGGAGGCGACCATCAGATTCTTGGCACCGC
AGGTGTACGGCTGTAGCAGACTTCTCCTGTATTCGTGAGCAATCGGATGC
CATGGAGCTCTTGACTGACTCATGACGCCCGGGCCACAGAAAACCGTGTA
CTATGGGCACCGGTTCCCCATGTATGCCATCGCTGATGAGAAAAGATTTT
CACGGATTTTTCAACTGGAAACCTATCCACACTTTAGAAAAACCTTTTGC
AACCCCCATGGTTTCCGTGTCCACTCATCAACGACGGAGCGGGGTTGCGC
GGAAATACTTGTCCAACCTAGCGATGGACGGAAGGAAACCAGTTGTTGCC
AACACATTTTGTGTGCCGCTGTGTTCTTAGGTCATGACATTAGATGATAT
TACATGGGAACCAGCTTGAAGTGACTTGCTGAGTAATATGTCGCCCATCA
TGGCGGCTTGACTTGACAAGAAACAATTCGCGGTGTACCATCCCATCTGA
CCCGGCGGCCTTCTCAGATCCTGGGACAAGGGGGGCTCTTCCGCCAGATG
GTCCAGGTTCTCAAGGGTCCCGGGCGCCACGGCGACGGCGGAGTGGCTGG
GCTGAAGGCGGCGAGGGTGAAGGCGGCTGCGAGTACGGCGCTGAAGCAGG
GTCTGATGCTGCCCGGTGGCCGAAAGAGCGAGGCGGACGGAGGTTCCCTG
GCTGCGGCCGACAGGTACATTGCATGTGTTCCGTGGCGTTTTACGGTACG
GTAAACGGTATGGGTTTGACGTGGTGCGGTGCGTCATGTCCTTGGTGTAA
TACGGAACGGCAATCTCAGATTTGTGCGTCTCTCGCCAATTCGTGTACTT
CTCTGGACAAGTCAACCATCTCCAAACTCCCCCCCCCCCCCATCGTGTGT
GTTAGTTTTATATTTTATATTTTTGTCGTAGTCTGTTTTTCAACCAGCTC
CTCGCCTCCGCCCCCCCCCAAACTACCTACTGTACCGATTTGGCGAACGT
TTTTTATTTTTGCTGCATATGCTAGTCTGTTCATGCAGCTATTGTTTTTC
CCTCATGAATCACCGCCGCACGCCTCATTCGCATGGCAGGTTTGGCCCCG
GCACCGGCGGTGGCCTGGGGGGGCCGCAGCAGGCAGGGTTGGCGACAACC
CCCCCCCCAGCGGCGGAGCCGAAGCTAGACCCCGTCGAGCAGGGAGGGCC
CGGTCCGGACTGGTCTTGGTGGCGCGAGAGGTGCGTTCTCTTGTCGCTGA
GCATGCTGGAGGCGGCTTCCGAGCGAGAGAAGGCGTTCGTGGATCGGTGG
AGAGCCAGGGTGTCGGCAGGAGGGCTGGACGACTACGATGAAGATGGGGG
TGGGGGGGGGAGGGGGAGGGGCGGTGCGGGAGGGGGGGGCACGCTGGCGC
CCCCGGCGTTCCTCGGGAATCTGCTCTCGGAGCAGAACACGATCGCCGTT
GTCGCCAGGTGCGTGTGTGTGTGTGTCTCTGTGTCTGTGTCTGGGTTGTT
AGCATCTGCCCGCCTGGCTGATGAAATCACTGCAGTGTCAGTGCGGCTGG
AAACATTGTATGTGTGCGTCTTTTTTTCTCAAGGGGGGCATGGGCATGGT
GTTCTTTTGCGGAGATGAGTTTCTTGGTCTGCACGGACGAGCGTGGTATC
TTATCTCGCTGCACTGCCGACTACTAGTATTTAGGATCACCCGCCATCGC
CGACCTTTTCTTTTTTCGTTGTTACTTTTTTGTGGTGTTTCTCAAAGTCT
TGTGTATGCGGGTACTGCTAGCGCAGTGGATTGGGAGGGGTTCAATCCAG
CAGTTTTTTTTTTGCAGCGCACGTCTTGTCACTGATGATCGGTGTTGTGT
TTTGTACGTGCCTCACGAGCTTACCCCCGAAGTGAGAACGCCTCTGTCTT
GGTTCTCATCGCTCTTCCTCTCTCTCTCTCCCTGTCCCTCTCTCGCATTC
TGTCTCTCTCTGTCTCTTCTCTGTCTCTCTCTGTCTCTGTCTCCCTTGTT
TCTCGTCTTTGTTTTTGTGTGTTGTGTGTCGTACTTGAAGGTACATTGAG
TACGACGGGAACATGGTGATCCCTCTGCTGTCGACGTCGGTCCTCCTGTC
CTGCGGCCGAAACCTCCCCGCCGGAAACATGATGTCTACGCTCATGGCGT
CCGGTAGGCCCCGCCCCGTGAAATACTTTCCCCGCATGCACGTTCTCGCA
ATTTTAGCGTCGTTGTTGTTGTTGTTGCTGGTGCATGGTTTGTTGTGGGG
TTTGTCGGTTGTTGTCGCTGATGCTGTTTACTGTTGTACGGTATGGAACG
GATTGGGGGTTTGGGTTGTCCCACACCATTTTCCGTCAGACGCAGATACG
GAAGCAGAAAGGACAAAGGCCACCTTCGAAACTGCCAACATATCCTCTGT
CCCCCACATATCCTTCGTTTTCCCGTCATTTAGTTAGCATTGGGATTGCA
ACACCCCCGGAGGGGTTCCTTGTGAATGTTGGCCGGGGACACGAGCGGGG
ACTTTCTCTCGAAAACATAAAAAAGATAGGGGGCTTGTGAATCAATTATC
GCGTGACCATGTAAACAACGCAGGCAAACCCCCCCCCCCTTTCCCCACCT
TCCCGCAAACACGGGCATAACCAATTTCAACACAAACCGTGCCGTGATTG
TCTCAACCCTCGCCGGCAGATCCTCGCGAGTGCAACGCCCTGGCGGAGGC
GTACACGTACTGCCTCGCCGCCGACGGTCTCAGCCTGGGGGGCAATAACC
TCCTTTCTCTCGAGGGGATGCTCTGCCCCCCCAACGGGGAGGCCGACGGA
GACTTCATGACCCTCGACGCCGCCCTCATCGGCGCCGGGACGGGCGGGCG
TAACTGGGGGGGCGACGAGGGGGCGGTGAGATGAAAGAGAGAGGATGGGG
GTGTTGTTGTGAGGTTCACACGCGTACATAGCAATCCCTGAAGACCCTGA
TGATGGCTCACTTGTATGTGTTTCTTGTTCTCTTGTTTCATCTACAATAC
ACACAGCAGCACTCTTGCTGACTCCTTGCTTCGGATAGACTGAACGGAAG
GGCGCGCGGACCGCTCCCAGCAGAGAGGGGCCGTTGAGGCAATATCCTCT
GTTTAACAACAATCCTAGGGAGTTGCAATTCCCGCCAGATCCAAATATCT
TGCCTAGACGTACTGTTGAGATCGTTGTACTTAATTCCCACAACAGGGGA
GGTAGGAGAGACACAGACACGCAGTCAATCAGAAACCAGGCGTAGGGAAG
GAGAGAGAGGAAGGGACAGAGACAGAGACAAGAGACAGATATAACCGTTG
ATTTTTTCCGCAGTTTAATTTTGGGTGTATCGGACGCGTTCGTTTGGAAA
GTATCTGCGTGTGAGGAGAGCACCCACGAGGTAAACGTTTGAGGTAGCCA
GCAGCAGTGGCAGCACCCTGTCCGTGTTGCTTCGTTGGTCGCTTCGTCGC
AAACTGCGTGCCTTTGTCCTTTTTGGCGAGGGTGAGGGTCATCGATCATA
TGATCACACGTGTGTTGCTGGTATCGGTGCCCCGCTCCCTCGGCCGCTTC
GTGCGCCCATCAACCCTTGGAGTTGTCTCCGCCTTCTGTATGTCGTCTTT
TCGTCTTTTCCTGCTTTTGGGTCCACTTTGAGCCCTTCCGTGCCAACGAC
AACTCCCGTGCGGCCAATGGTCTAGCAGCTAAGACATGATTACGCCTCCC
TTCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCTCCTCCCCCCCCCCCCCC
CCCTTTTTGTTGCGACCCACACCAACCCCCCCCCCCCCCCCGCCNNNNNN
NNNNGCCATGTTGGTGCCTCCCCTGCCCAAGAAAACCCCCCGCGGGGCAT
AGGTTTTGTCTGCAAAAAAATGTTTTCCCCCCCCCCCCCCCCCCCCCCCC
CCCCTTCTGGCACCCGTGTTACCTCACACCGGCTACCGCTTGTGGTGCAT
ACCCGACCAACACCGCCACCAGCTTCGGACGGTACGCCTGTGCATCCTCG
ACCTCCTCCTGGAGAACGTGGAGCAGCGGGGGCCGAACCTCGCACACCTT
CTCTTGGGCCTCGTGGGTCCCTCCGCGACCACCGCCGTCGCCGGGCGGGG
GAGACGGGCGGCGGCGTTGCCGAGGGCGACGGTGTGCCTGGAGGCCGTAG
TGAACCTACTGCAGAGCCCCGTGGTGGTGGAGCAAGAACCTCGCCTCACG
GAGAAGTGGTGCGTGTGGCCGCTGGGCCTTCTCTCTCTTCCGCGTGTGTT
GGTTGTGCACTGCATGCTGCATGCCACCCGTTTCCTCCTCGTGCTCGCGT
CACGCTTCATTTCGAGAATTAGGAAGAGGGGGCTTTGGCGCTATTACGTG
CGCTCTTGTATCGCCTTGAGTGCATGGCCCTGTGTCTGTGGCACGCAAGT
ATGGCGAGATTTTTGGTTGATCTGTGTGTGCGTGTGTTTTGCCGAGCGCG
TCGTGTAAGGCTGATTGTTCGGAAGAGAACATGTTTTTTCGTGTATCCTC
GTTGTTGCCATATTGTTTGAGCGACCTGTTAATGCATTCACCTTACCTTC
CTCGGCCGTACGCATTTCCCACCCGTAACCACTGCGACGACGGCGACGAC
GACGACCAGTTCTCATCTTGTTTACAAGCTCTGCTCCTCCAAGGACACCC
GTGTGTCCGCGCTGAACAGGCTCAGACATTCCTCCGGGGGGAGTTCCAAC
GCGGCATTCTTCCCTCAGGTATGCTCATTGTATGCACCCTATGTGCAACA
CGAGTACGTACGTGCGTGTCTCAAGGCGCGTGATTTTGATTTGATCTCTC
ACGATACCGTGGTTTCGGTCTGCGGTATGCATCTACGACAACGTCGATCT
ACGACAGGGCTGATCTACGACGACAGGGTTGATCTACGAAGCAGTGCTTT
TCGTTGCTCGGAAAGAAAGCAATCGGAAAAACACAGAATAATTGACACGT
GATTCTCTCGTCGGGGTTGGGTGTCTGCTCGGGGGCTGTGGGGCGATTGG
CCGCGTTGTGCAGTTTTCTGTCGGTACGGTTTTCCGCGCTTGTGAAGACG
TTTGCGGTTCGGCCCGAGGACGAGACGTTATTTATTTTTCGCGAGGGTGC
ATAGCCGCCTGAATCGCTTTTCCCTTTCATATTTTGCGGTTTGTTGTTAA
TGCTGATGTTGTCGTTTGTGCAAGACTTTTTTTTTTTTTCATTCACGCGT
GTGTTTCAGCAGAAATCCCCTGTTTTGGGTTTGGATTCCCTGTCGTTGGG
CGGGGCGGCACTTTCATATGGCCCAAACGCCCCACGTGACATGTTGACCC
AGATCAGAACGGATTTTCATTGTACAGAGGCATCCCCTACAGATACCCCC
GTGGGTGCGCTGACGCGCCTGCTAAAACTCACCCAAAAAACCTCTACCGC
CTTGGGAGAGCCTGCTAAAACTCACCCGGAAATCTATGCCGCCCGTACAC
AGAGTTGGACATGTTTTTCTTGCCAAAAGGCTCACTCGTTTCTTGTGTGT
GTTGTGCATGTTGAAATCACACCTCCTCCTCCTCCAAGGCTCTAAGGGTT
GCCCTCGGAGACAGCGGTCGGTCGATGATGATGATGCCGCCGCCGGAGGC
CAAGGCAGAGGCGTCATTCGGGCGACACTGCCTGGCGTGGCTGCTCAAGG
CCGCTTCGATCGACCTTCGGACGTCGTGCGAAGGTATGTATGTATGCCTG
TGGAGGTGGCGGTAGGGGGGGGGGGAGGGGGTACTCACAGCCGTGCATGC
CGTAGTCGTCAGACGATTGACCTCGCATCCCAGCGAAGCCGGCACGGAGC
ACGCCGGCTTATAGGGGGGTGGGTGGTGTTTTTTTGCCGGATTTTCGGTC
GAGTTCTAAGGGGGCGTTTTGGTGGTCGTAGATGGAGGTGTGGGTGGTGT
GATGCTTTGTCTCAGAAATGAAACATGCGACCCCTCGCAGCAGCTGGACG
TGCGTACGGCAGGAAACGCGGGTGCGCGCGTTTCGCGCCCCAGGTGCCGT
CGGAAGCGGCGTTGTGTGCACACACCCCGCCAGTACCAACATACCAGCTT
AAAATTTATGCACGGAACCCCCATCCCCCCGGGCCCCTTCGTCACGAAAT
TACAGAAAAGCCGGTTCACGTCTCTCACGCCAAGGCTCTCCTGGGTGCGC
TGTTCGTTGGCGACACTCCACACGGGGTCTCCAACGGCGGAGGCGGAGCC
GGGGTCGGGGATTACGCCCACCAGCAGCAGCAGCAGCAGCAGCGTTTCGG
GCTGTTCAACGCCCCCGGCTCCTCCTCCTACTCGCAGTCCAACAACGGGC
TCGACCAGTCGCCGGCCCCCCTGCTAACGCTCCTTGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1432:2947..13283+ >mRNA_Ecto-sp13_S_contig1432.3347.1 ID=mRNA_Ecto-sp13_S_contig1432.3347.1|Name=mRNA_Ecto-sp13_S_contig1432.3347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1929bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1432:2947..13283+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTGACGAGGGTGTCCGGCGATCCCTGACCAACAGCGGCGATAGCTT
CCGGGTTTTGACGGCCTTGACCAATCTGGTGACGTGCGGCGTGCGGCCGT
CCCTGAAGGGATCGATCTACAAGGCCCTGGCGGCGTGCGCCAAGGATCCC
GAGACCGCTCGGCGAATCTGGATTTTCATCGAAGAGGCGCAGCAGCTCGT
GCCTACGGGAACCGGGAGGCAGGAGGGTGGCATCGTCGGTGGCGTCATGG
CGAAGAACGCCTCCTCTTCCTCCAACTCTCAGCCCCGGGGGCTGTTCGCA
GAGATGGAGCAGGTGGAGTCACGCGAAAGGACGTACCCGGTGACGGAGGG
ATTCTGCTGCCTCATTCAGGAATTGGTGCAGCACGACCTGCCGTACAATC
TCGGAGAGAAGACGCGCTACCGAGCGGCTTCGGGCATCCAGCCGTACGTG
GCCTACCTGTTGAAGTGCGTGCTCATCCCGGAGCTGAGGTTCGCTGATGC
TGGAGAGAGGTGGAGGGTGGCGGCGAGGGTGCTCCAGGTGATGCTGACTC
TTCTGAGGAGGTACCCGCTGACAGGGGAAGGCGGTGGCGCCAACCCGGGG
CCGTCGTCGATGGCTACCCCGGAAGACGAGGAGGCGTGTAGACTGGACTT
CGACCCCAAGGCGTCCTCCTCTTCCTCCTCTTCCTCCTCGCAGCGGCGGT
ACAAATCACCCGGGTACTACATCCTCAGAGAGATCCTGGGACAAGGGGGG
CTCTTCCGCCAGATGGTCCAGGTTCTCAAGGGTCCCGGGCGCCACGGCGA
CGGCGGAGTGGCTGGGCTGAAGGCGGCGAGGGTGAAGGCGGCTGCGAGTA
CGGCGCTGAAGCAGGGTCTGATGCTGCCCGGTGGCCGAAAGAGCGAGGCG
GACGGAGGTTCCCTGGCTGCGGCCGACAGGTTTGGCCCCGGCACCGGCGG
TGGCCTGGGGGGGCCGCAGCAGGCAGGGTTGGCGACAACCCCCCCCCCAG
CGGCGGAGCCGAAGCTAGACCCCGTCGAGCAGGGAGGGCCCGGTCCGGAC
TGGTCTTGGTGGCGCGAGAGGTACATTGAGTACGACGGGAACATGGTGAT
CCCTCTGCTGTCGACGTCGGTCCTCCTGTCCTGCGGCCGAAACCTCCCCG
CCGGAAACATGATGTCTACGCTCATGGCGTCCGATCCTCGCGAGTGCAAC
GCCCTGGCGGAGGCGTACACGTACTGCCTCGCCGCCGACGGTCTCAGCCT
GGGGGGCAATAACCTCCTTTCTCTCGAGGGGATGCTCTGCCCCCCCAACG
GGGAGGCCGACGGAGACTTCATGACCCTCGACGCCGCCCTCATCGGCGCC
GGGACGGGCGGGCGTAACTGGGGGGGCGACGAGGGGGCGCTTCGGACGGT
ACGCCTGTGCATCCTCGACCTCCTCCTGGAGAACGTGGAGCAGCGGGGGC
CGAACCTCGCACACCTTCTCTTGGGCCTCGTGGGTCCCTCCGCGACCACC
GCCGTCGCCGGGCGGGGGAGACGGGCGGCGGCGTTGCCGAGGGCGACGGT
GTGCCTGGAGGCCGTAGTGAACCTACTGCAGAGCCCCGTGGTGGTGGAGC
AAGAACCTCGCCTCACGGAGAAGTGTTCTCATCTTGTTTACAAGCTCTGC
TCCTCCAAGGACACCCGTGTGTCCGCGCTGAACAGGCTCAGACATTCCTC
CGGGGGGAGTTCCAACGCGGCATTCTTCCCTCAGGCTCTAAGGGTTGCCC
TCGGAGACAGCGGTCGGTCGATGATGATGATGCCGCCGCCGGAGGCCAAG
GCAGAGGCGTCATTCGGGCGACACTGCCTGGCGTGGCTGCTCAAGGCCGC
TTCGATCGACCTTCGGACGTCGTGCGAAGTCCAACAACGGGCTCGACCAG
TCGCCGGCCCCCCTGCTAACGCTCCTTGA back to top
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