prot_Ecto-sp13_S_contig14298.3333.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14298.3333.1 vs. uniprot
Match: A0A6H5JHA1_9PHAE (RB_A domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE) HSP 1 Score: 747 bits (1929), Expect = 4.630e-252 Identity = 484/650 (74.46%), Postives = 499/650 (76.77%), Query Frame = 0
Query: 1 LALYDDDQPAAEAEDARPPRTTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAESXXXXXXXXXXXXXXXXXXXXXXXXAGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSSXXXXXXXXPRGCYSRRHSSLLSEGTGASGRLEGGREVVSSPAAGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----TYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSHHAPAPATSSPCIGGEHGTAVATAAAAAA-DVSLMDTTAAESSAAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEPLERGEGEAQHCLALSFGPPEDNNGPSXXXXXXXXXXXXXXXA----VQAGSPATEGQVRTAVAXXXXXXXAGSFPESILPPGGRQAXXXXXXXXXVGGGGFGILRNPLASRSSRLGGATGMAGIAVGGGGGARGGPPETPVMAVM 640
LALYDDD+P AE EDA PP TT GADGRGGGTCRLGDLLRQ G V+ N+RDSLFPPAI GPSSAA NDGDSNNMTNG LPSQAAE+ AGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSS XXXXX PRGCYSRR SSLL++G+GASG LEGGREV S+PAA SE XXXXXXXXXXXXXXXXXXXXXXXX TYGGEAALLAKLSASGRCPA+EVRAMS HVVEVIEALLQEGIVVSH APAPATSSPC GGEHGT +ATAAAAAA DVSLMDT A E++AAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRG HRGVVLDEAFVLTPDLRDTVGTP YGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEP ERGEGEAQHCLALSFGPPED+NGPS XXXXXXXXXXXXX VQAGSPATE QVR XXXXXX AG FPESILPPG RQA VGGGGFGILR+PLASRSSRLGGA GMAGIAVGG ARGGPPETPVMA +
Sbjct: 72 LALYDDDEPTAETEDALPPTTTMGADGRGGGTCRLGDLLRQ------------------------------------GWVL------------NQRDSLFPPAIVGPSSAALSNDGDSNNMTNGALPSQAAENKNKSGGADETSDDHDISSAATAA-AGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSSSXXXXXSFPRGCYSRRRSSLLTDGSGASGGLEGGREVASAPAADSEPTTAVAAQRAGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYGGEAALLAKLSASGRCPAEEVRAMSTHVVEVIEALLQEGIVVSHRAPAPATSSPCTGGEHGTTIATAAAAAAVDVSLMDTAADENAAAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGRGGGGGHRGVVLDEAFVLTPDLRDTVGTPHYGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEPQERGEGEAQHCLALSFGPPEDSNGPSASXXXXXXXXXXXXXXXXXXVQAGSPATESQVRMXXXXXXXXXAAGRFPESILPPGDRQAGGGSPRSGGVGGGGFGILRDPLASRSSRLGGAAGMAGIAVGGXXXARGGPPETPVMATV 672
BLAST of mRNA_Ecto-sp13_S_contig14298.3333.1 vs. uniprot
Match: D7G8E5_ECTSI (Putative retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E5_ECTSI) HSP 1 Score: 701 bits (1809), Expect = 1.140e-236 Identity = 447/592 (75.51%), Postives = 455/592 (76.86%), Query Frame = 0
Query: 1 LALYDDDQPAAEAEDARPPRTTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAESXXXXXXXXXXXXXXXXXXXXXXXXAGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSSXXXXXXXX---------PRGCYSRRHSSLLSEGTGASGRLEGGREVVSSPAAGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSHHAPAPATSSPCIGGEHGTAVATAAAAAADVSLMDTTAAESSAAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEPLERGEGEAQHCLALSFGPPEDNNGPSXXXXXXXXXXXXXXXAVQAGSPATEGQVRTAVAXXXXXXXAGSFPESILPPGGRQ 580
LALYDDD+PAAEAEDA+P TTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAE+ XXXXXX AGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNS XXXXXXXX PRGCYSRR SSLL++G+GASG LEGGRE S+PAA SE XXXXXXXXXXXXXX TYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSH QQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVS A AVEP ERGEGEAQHCLALSFGPPED+NGPS XXXXXXXXXXXXXX XXXX GSFPESILPPGGRQ
Sbjct: 25 LALYDDDEPAAEAEDAQPRATTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAENNKGGXXXXXXTSDDHDINSAAVAAAGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSXXXXXXXXXXXXXXXXXXPRGCYSRRRSSLLADGSGASGGLEGGREGASAPAADSEPATAVAAPRAGSEGGEAVESETAXXXXXXXXXXXXXXXXXTYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSH--------------------------------------------------QQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVSTAAAVEPQERGEGEAQHCLALSFGPPEDSNGPSAXXXXXXXXXXXXXXXXXX-----------------XXXXXGSFPESILPPGGRQ 549 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14298.3333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig14298.3333.1 ID=prot_Ecto-sp13_S_contig14298.3333.1|Name=mRNA_Ecto-sp13_S_contig14298.3333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=641bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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