mRNA_Ecto-sp13_S_contig14295.3332.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14295.3332.1
Unique NamemRNA_Ecto-sp13_S_contig14295.3332.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 1.730e-145
Identity = 209/232 (90.09%), Postives = 216/232 (93.10%), Query Frame = 1
Query:    1 VCSRSLSVGVSVARTYTVEWTGTGDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGAAGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIVNDSTEMSMR 696
            V S +  + V   RTYTVEWTGT DSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPM GTSSGYKV+VTDSNDESSMGCSGDFTLVASTDAPAAG  GYSLTVTSPSDGDTAMAG VYTVEWDYENG GSSTDRFA+DLY++GTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSE FEIVND T+MSMR
Sbjct:   22 VVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSSGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVNDRTDMSMR 253          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 2.260e-123
Identity = 183/234 (78.21%), Postives = 198/234 (84.62%), Query Frame = 1
Query:    1 VCSRSLSVGVSVARTYTVEWTGTGDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGAAGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEI-VNDSTEMSMRF 699
            V S    + V   R YTVEWTGT   RFEIDLYYC SFCM+D CGDWVTALCPYGADGCPD+ GDYDI+MPEPM GTSSGYKVMV ++ DES MGCS DFTL+AS DAP AG  GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLY  G GTGDCGTYV TLCD+PSIGCPDSQGDYDVEIPSDTPAGMYS+RVGVF D+MM+DCS+ FE+  +D   +SMRF
Sbjct:   22 VVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVG-GTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVDTSDDMTISMRF 254          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: A0A6H5KR87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 9.600e-122
Identity = 177/193 (91.71%), Postives = 186/193 (96.37%), Query Frame = 1
Query:  118 MEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGAAGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIVNDSTEMSMR 696
            MED+CGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYK+MVTDSNDESSMGCSGDFTLVASTDAPAAG  GYSLTV SPSDGD AMAGEVYTVEWDY NG GSS DRFA+DLYT+GTGTGDCGTYVATLCDKP+IGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSD++MFDCSEAFEIVNDST++SMR
Sbjct:    1 MEDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKIMVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVNSPSDGDIAMAGEVYTVEWDYNNGLGSSKDRFAIDLYTYGTGTGDCGTYVATLCDKPTIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDEIMFDCSEAFEIVNDSTDLSMR 193          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 7.970e-108
Identity = 163/218 (74.77%), Postives = 186/218 (85.32%), Query Frame = 1
Query:   46 YTVEWTGTGDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGAAGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIVNDSTEMSMRF 699
            YTVEWTG    R++IDLYYCGS CMEDECGDWVTALCPYG DGCPDTQGDYD+VMPEPMDGTSSGYKVMVTDS+DES  GCSGDFTL+AST+AP A   G  ++VTSPSDGDTAMAG  YTVE+DY+NG GSS +RFA+DLY+ G G+GDCGTYV T+CDKPSIGC DSQGDYDV IPS T +GMYS+RVGVF DD ++ CS++FEIV   + MS+RF
Sbjct:   37 YTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSG-GSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGES-MSVRF 252          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 1.940e-92
Identity = 148/217 (68.20%), Postives = 175/217 (80.65%), Query Frame = 1
Query:   28 VSVARTYTVEWTGTG-DSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTS-SGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAG-AAGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIV 669
            V  +R YTVEWTGTG ++R+EIDLYYCGS CMEDECGDWVTALCPYG DGCPD +GDYDIVMPEPM GTS SGYKV V D +D+ S  CS +F L+A  +AP+AG A G  +TVTSPS GD+A AGE YTVE+DY+NG GSS  RFA+DLY+  TG+GDCGT++ TLCDKP+IGC DS GDYDVEIP D  AGMY++RVG F DD ++ CS+ FEI+
Sbjct:   19 VVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYS-ATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 2.160e-92
Identity = 150/225 (66.67%), Postives = 176/225 (78.22%), Query Frame = 1
Query:   37 ARTYTVEWTGTGDS-RFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTS-SGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAG-AAGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIVN-DSTEMSMRF 699
            +R YTVEW+GTG + RFEIDLYYC S CMEDECG+WVTALCPYG DGCPD +GDYDIVMPEPM GTS SGYKV V D +DE S  CS +F L+A  DAP+A  A G  +TVTSPS GD+A AGE YTVE+DY+NG GSS  RFA+DLY   TG+GDCGT++ TLCDKP+IGC DS GDYDVEIP D  AGMY++RVG F D+ ++ CS+ FEI+  D + MS RF
Sbjct:   35 SRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYA-ATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGADDSSMSYRF 258          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 1.570e-91
Identity = 151/236 (63.98%), Postives = 175/236 (74.15%), Query Frame = 1
Query:    1 VCSRSLSVGVSVARTYTVEWTGTGDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTS-SGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGA-AGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIVN-DSTEMSMRF 699
            V + S  + V   RTYTVEWTG    RFEIDLY+CGS CMED CGDWVTALCPYG +GCPD +GDYDIVMPEPM G S SGYKV V D +DE SM CS  F L+AS DAP AG+ +GY LTVTSP++GD+A AGE YTVE+DY+NG GS  DRF++DLY    G GDCGTYV ++CDKPSIGC DS GDYDVEIP+DT AG Y +RVG F D+ ++ CS  F I+  D   MS  F
Sbjct:   22 VVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYM-ADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGDDESMSYDF 256          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 6.640e-89
Identity = 141/224 (62.95%), Postives = 164/224 (73.21%), Query Frame = 1
Query:   28 VSVARTYTVEWTGTGDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGAAGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIVNDSTEMSMRF 699
            +  A + TVEWTGT   RF+IDLYYCGS CMEDECGDWVTALCPYG DGCPDTQGDYD+VMPEPMDGTSSGYKVMVTDS+DES MGCSG+FTLVAS                                 +D++NGFGSS +RF++DLY  G G+GDCGTYV ++CDK SIGC DSQGDYDV IPSDT +GMYS+RVGVF D  +F CS++FEI+   + MS+RF
Sbjct:   31 IVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDMGCSGEFTLVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSG-GSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGGESSMSVRF 253          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.910e-85
Identity = 144/225 (64.00%), Postives = 166/225 (73.78%), Query Frame = 1
Query:    1 VCSRSLSVGVSVARTYTVEWTGTG-DSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTS-SGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGAA-GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEI 666
            V + S  + V   RTYTVEWTGT  D+RFEIDLYYCGS CMED+CGDWVTALCPYG DGCPD +GDYDIVMPEPM GTS SGYKV V D +DE    CS +F L+AS++AP+ G   G +L VTSP+ GD A     YTVE+DY+NG GSS DRFA+DLY    G GDCGTYV ++CDKP+IGC DS GDYDVEIP DT AG Y +RV  F DD ++ CS  F I
Sbjct:   22 VSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLY-RADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245          
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 9.830e-69
Identity = 126/212 (59.43%), Postives = 150/212 (70.75%), Query Frame = 1
Query:    1 VCSRSLSVGVSVARTYTVEWTGTG-DSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTS-SGYKVMVTDSNDESSMGCSGDFTLVASTDAPAAGAA-GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDS----QGDYDVEIPSDTPAGMYSVRV 615
            V + S  + V   RTYTVEWTGT  D+RFEIDLYYCGS CMED+CGDWVTALCPYG DGCPD +GDYDIVMPEPM GTS SGYKV V D +DE    CS +F L+AS++AP+ G   G +L VTSP+ GD A     YTVE+DY+NG GS  DRFA+DLY    G GDCGTYV ++CDKP+IGC DS    +G + V+       G +S+ V
Sbjct:   23 VSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLY-RADGDGDCGTYVQSICDKPTIGCKDSNPVRRGRWRVQDSGGPLRGRFSLLV 233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14295.3332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7G3F0_ECTSI1.730e-14590.09EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JY62_9PHAE2.260e-12378.21GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KR87_9PHAE9.600e-12291.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3E8_ECTSI7.970e-10874.77Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
D8LI46_ECTSI1.940e-9268.20EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFT9_9PHAE2.160e-9266.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYL2_ECTSI1.570e-9163.98EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5KP11_9PHAE6.640e-8962.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRG9_9PHAE1.910e-8564.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH21_ECTSI9.830e-6959.43Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14295contigEcto-sp13_S_contig14295:347..4029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2090
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionSecreted protein similar to EsV-1-163
Ec32 orthologEc-00_006590.1
Cds size585
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14295.3332.1prot_Ecto-sp13_S_contig14295.3332.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14295 1735..3912 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462764.247336-UTR-Ecto-sp13_S_contig14295:346..17341681462764.247336-UTR-Ecto-sp13_S_contig14295:346..1734Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14295 347..1734 -
1681462764.3090985-UTR-Ecto-sp13_S_contig14295:3912..40291681462764.3090985-UTR-Ecto-sp13_S_contig14295:3912..4029Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14295 3913..4029 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462764.2649484-CDS-Ecto-sp13_S_contig14295:1734..18831681462764.2649484-CDS-Ecto-sp13_S_contig14295:1734..1883Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14295 1735..1883 -
1681462764.2734048-CDS-Ecto-sp13_S_contig14295:2219..23581681462764.2734048-CDS-Ecto-sp13_S_contig14295:2219..2358Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14295 2220..2358 -
1681462764.2816973-CDS-Ecto-sp13_S_contig14295:2721..28891681462764.2816973-CDS-Ecto-sp13_S_contig14295:2721..2889Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14295 2722..2889 -
1681462764.2904396-CDS-Ecto-sp13_S_contig14295:3126..32491681462764.2904396-CDS-Ecto-sp13_S_contig14295:3126..3249Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14295 3127..3249 -
1681462764.2996402-CDS-Ecto-sp13_S_contig14295:3906..39121681462764.2996402-CDS-Ecto-sp13_S_contig14295:3906..3912Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14295 3907..3912 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14295.3332.1

>prot_Ecto-sp13_S_contig14295.3332.1 ID=prot_Ecto-sp13_S_contig14295.3332.1|Name=mRNA_Ecto-sp13_S_contig14295.3332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKVMVTDSN
DESSMGCSGDFTLVASTDAPAAGAAGYSLTVTSPSDGDTAMAGEVYTVEW
DYENGFGSSTDRFALDLYTHGTGTGDCGTYVATLCDKPSIGCPDSQGDYD
VEIPSDTPAGMYSVRVGVFSDDMMFDCSEAFEIVNDSTEMSMRF*
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mRNA from alignment at Ecto-sp13_S_contig14295:347..4029-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14295.3332.1 ID=mRNA_Ecto-sp13_S_contig14295.3332.1|Name=mRNA_Ecto-sp13_S_contig14295.3332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3683bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14295:347..4029- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTGTTCCCGTTCGCTCTCGGTGGGTGTGTCTGTCGCCAGGACATACAC CGTTGAGTGGACCGGAACCGGCGACAGTCGCTTCGAGATCGACCTCTACT ACTGCGGATCCTTCTGCATGGAGGTACGGATACGGGTTTTTTCCCGTAAC TTTTTGCCGCAGGGTTCCGTTATCAATGTGTGCGAGCACCTTATACTCAA ACATATTCCGGGGATGGGCACAAAAAACCCACACAGGAAACTAGAAACTG GGCTTCCTCAACCATGTGTATTTTCTTCCGTGGGCACGGGTGGTTGCGGT GTTTGTTGCACCAGCAATGGTGTGGACGGCTCGGCGCATCTTGTCTTCCA ACATTGTTGTCTTGAGGGACGTAGTCTGCACAAAGATCAGGTGTCGTATG GTGTTCGTTTTGTCGGTTGTAAAACACGAGAGATGCCAAGACATTCTTCC AATTGAAGGCGGGCGAGAAAACTAAGCAGATCTCGGCACGTGAGCGTGCG TCTGGAATATGTGCAATATTACATACCGTTATGGGTATGTTCATATTACA AATCGTTTGCACGTCCAAAGGGTAATATGGCGTGCCTCATCATGCCTGGT GTTCAAAAAAACGCGTTCCTCCTTCCCCCTCTTGAGTTTTACGCAGTGTG TTCGTTTCTGGTCCAAGTCAGGATGTCTAGGCCTCCTCAGCTTGGCGTGT TCTACATTTGTAGCCCTGTTGAGCACACCGCCTCCGCACCCAACTGCCGT AATGCGCCTGTTTGTCTTCCGTGAATACAGGACGAGTGCGGTGACTGGGT GACGGCCCTTTGCCCGTACGGTGCGGATGGCTGCCCCGACACTCAGGGTG ACTACGACATCGTCATGCCCGAGCCCATGGATGGTACCTCCAGCGGCTAC AAGGTATGCTTCCGCACGGCTTGCAAGCGACATTTTTCAGCGATCGATTC GGTCAACAACCATCGGCTTGTGGGAACACTCTCCCGGAGAATTTCGCTCG CGTTGTGGGACATTTCAAGCCGTGCAGCGACCCCATGTTTGGCGCGAAAG AAGTCAACTTCGGCAAAACAACGCTCTAGCCACATTTTCCAAGTGTGTGG TTGCTGACAGCGTGCTGGTTTTCCTCGCGCTAACCTCCAGGTCATGGTAA CTGACTCCAATGACGAGTCCAGCATGGGCTGCTCCGGCGACTTCACCCTG GTCGCGTCCACGGATGCACCCGCGGCTGGCGCAGCGGGATACAGTCTCAC CGTCACTTCTCCCTCGGACGGCGACACCGCGATGGCGGGCGAAGTGTACA CCGTTGAGGTGAGGAAGTTGGGCATCTTTTCAGACAACATTCATGACGTC CGGATAAGACCACCCCCTCCTAACCAATTCTCAGGAGGGGATCCACCACG TTGGAAAGGTCATACATGCTACACACGGTGAGAATGTATCTCATTACGTT TATTGTTGCTGTTCTTGTTGTCGGCCGGGGTGAAGAAAAACTGGAACAAT TTTTCCCCGTCTCTCATGGCAATTATTGTGGATTTATTGTTGCCTTATTT ATTCGTAAGAGATGAAAGCACTACACATAGCGCGGCTCGCCCTCGCTCCC CGCTTTTTCTTTCCCTAATGCACGACGCTTCCTCCCTCCCCTCCCGTCGT CTTGTCGCCACAACGAAACAGTGGGACTACGAGAACGGCTTCGGTTCCTC CACGGACCGTTTTGCGCTCGACCTTTACACCCATGGCACCGGCACCGGCG ACTGCGGAACCTACGTGGCTACCCTCTGCGACAAGCCCAGCATCGGCTGC CCCGACTCGCGTACGTACATGTGCTTTCCCTGTGTGTTCTACGTTGTTAT TGGTAGCAGTGTGTTATGGATGTCCTCACATTGTGTTGTCGGATTAGTTG TTGAACCTCTCGTGGGTTGGCGTGATTGACGTGGGTCCTTTGTCGTACTC CACAAGGGGCTATGATTTGGTGAGCAAATGTTGTGGAACCGTCGCAACTC TTCGTGTCTCTAATGTCTGTCTCTGCCTCTGTTACACTTCCATGACAGTG CACTTACCTCATGTTTTGCGCTTGCGCCAAAATTACTGACTCTCAACCTC CCGGCGCCATATTTGTTTTCACGACTTGTTTTCGCTGGGCCCTCAGAGGG TGACTACGACGTGGAGATCCCATCGGACACCCCTGCCGGGATGTACTCGG TTCGTGTTGGCGTCTTCTCGGACGACATGATGTTCGACTGCTCGGAAGCT TTCGAGATCGTCAACGACAGTACGGAGATGTCGATGCGGTTCTAAGGGAA TGCCCCATTTCTCTGCTAGGTTCCCATTGAAAGTAGCTGAAACTTGTGAA ATCGGTTTTTGCCTCATTGATAGAAGGGAACTTGAGGTTGTCGGTGGTGG AACAGGAATTTTTGCATTTGGTGCAGAAAAAAAAATTTCATGGTGGGGTT GAACGAACGGTCGACTAGTATCTCGAGAAGAAATGCGCGGTAGACATGTA CGAGACGAAGAGGGCGGGGATAGTACAAGGTCGAGAAAGAAAGGCATGTG TTGTTTAATAGATTTTCGTCAATGTTGTTACGTTGTTTTGCCTGCCGTTT TGCTTCTGGTGCTATTTACCCTCTCACCACAGCCTACGTGCTTTCTTCAT CCCCTTTGCCGGTCTTGTTGTGTTGGACATGTCGACGCTGAGGCATCGTT CCTCCTCGACTGATAAAACTCTTGAGTGGCGACGATACGGACAGGGGAGG GTGTCTATGTGCGCTGTGGTGTGTTGGAATTGTTGTCTTGTTTGGAGCCG TCTTCCTTCGATTGGCGAAGAATATTCAATGTGAGGGTACTCTGTCCCCG TACATTTGCTGTTGAATCATCTGTAGTATTACTGTGCGACGACCTCAAAG AGATGTAGAGGCGGGGTCATTTTCTACAAGCGGTATGTCTAGCAGCGTCG GGCGGACAGCCAAGCTAGTAGTTTTGTTTTGGGGACGATGGAGGTATTTC GACAACCACCACAAGCTTTTACAACTGCAGTGCCAAGGCGCTCAAAGTCA GCAGGCCGCCAACGGTATGATGACAAGTTTTTCGAACATTAGTCATTTTA TTACATCTCGTACAGGGTCCGTGCCTGCGCGAAGTCGACAAAGTCGGAAA CGAACGCAAGCTATGGCTGGCGATGCCACCGGGTTACGCAGGGGCGAGGT ACGGAAAAGAGCCCTGCCTGCGCTTCCCGCATCATCACCGGCGTATCCAT GGTGGGCACGGAAAGCCGTGCTTTCCAACTCTTTTCGTCGACCGGGATGG ATTATGGACGTGGTCCGGTTGAATTTCTCACGCTGCGTGATGGCTATCTT GCTGAACGAGGACTGGCAAATGAAAGGACGGGCAAGAGGTTGAAGCTCGC GGAACGGATGAGAGTGGCCACTAAGGAATTCGCGGGAGTGTACAACCGGG GTATGAGAAAAAAGTTTTAGACCGAAAGCAACCGTGCTAAAGAAAAGCGG CGGGCGGGCGAGGACATAACGTTGCAACGTCCGATACGGATAACCAACGT AAGAACCAATTTGTAGTGCGCTGCACGCGTCATCGATGTGGAAAGACAGC CCCGTTAGGCACGGGGGTGCGAGACTTTCCCATGCCTGTTTTGGTTGCTT CGCCTGCTTTCAGCGCGAAAACCATCACTTCGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14295:347..4029-

>mRNA_Ecto-sp13_S_contig14295.3332.1 ID=mRNA_Ecto-sp13_S_contig14295.3332.1|Name=mRNA_Ecto-sp13_S_contig14295.3332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=585bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14295:347..4029- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGGACGAGTGCGGTGACTGGGTGACGGCCCTTTGCCCGTACGGTGC
GGATGGCTGCCCCGACACTCAGGGTGACTACGACATCGTCATGCCCGAGC
CCATGGATGGTACCTCCAGCGGCTACAAGGTCATGGTAACTGACTCCAAT
GACGAGTCCAGCATGGGCTGCTCCGGCGACTTCACCCTGGTCGCGTCCAC
GGATGCACCCGCGGCTGGCGCAGCGGGATACAGTCTCACCGTCACTTCTC
CCTCGGACGGCGACACCGCGATGGCGGGCGAAGTGTACACCGTTGAGTGG
GACTACGAGAACGGCTTCGGTTCCTCCACGGACCGTTTTGCGCTCGACCT
TTACACCCATGGCACCGGCACCGGCGACTGCGGAACCTACGTGGCTACCC
TCTGCGACAAGCCCAGCATCGGCTGCCCCGACTCGCAGGGTGACTACGAC
GTGGAGATCCCATCGGACACCCCTGCCGGGATGTACTCGGTTCGTGTTGG
CGTCTTCTCGGACGACATGATGTTCGACTGCTCGGAAGCTTTCGAGATCG
TCAACGACAGTACGGAGATGTCGATGCGGTTCTAA
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