prot_Ecto-sp13_S_contig14294.3331.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14294.3331.1
Unique Nameprot_Ecto-sp13_S_contig14294.3331.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14294.3331.1 vs. uniprot
Match: D8LMY3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY3_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.090e-47
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 
Query:    1 MTEKLSKLEGLAAGGDDGHTLLQQHQKEMLAKLREIRAAMATETGELDSVKEANAEVAKLREVIKRRDYRILHLTRALEAGASSSADPGSA 91
            MTE+LSKLEGLA GG+DGHTLLQQHQKEMLAKLREIRAAMATETGELDSVKEANAEVAKLREVIKRRDYRILHL+RALEAGASSSADP SA
Sbjct:    8 MTEQLSKLEGLA-GGNDGHTLLQQHQKEMLAKLREIRAAMATETGELDSVKEANAEVAKLREVIKRRDYRILHLSRALEAGASSSADPTSA 97
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14294.3331.1 vs. uniprot
Match: A0A7S2GHJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHJ2_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 7.000e-5
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0 
Query:    4 KLSKLEGLAAGGDDGHT--LLQQHQKEMLAKLREIRAAMATETGELDSVK----EANAEVAKLREVIKRRDYRILHLTRALEAGASSS 85
            +L KLE  A G  D  T   L+ +QK++L +L+EI+A M  + G+++ VK    +A AE  KL   +K+++YRI HL + L    S S
Sbjct:   25 RLGKLE--AGGSSDTATDVALENYQKQVLLRLKEIKAKMNEDGGDIEDVKLQRDQALAENEKLAARVKKQEYRIKHLIKCLNEEESKS 110
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14294.3331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMY3_ECTSI1.090e-4794.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2GHJ2_9STRA7.000e-538.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14294contigEcto-sp13_S_contig14294:3408..4004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14294.3331.1mRNA_Ecto-sp13_S_contig14294.3331.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14294 3408..4010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14294.3331.1 ID=prot_Ecto-sp13_S_contig14294.3331.1|Name=mRNA_Ecto-sp13_S_contig14294.3331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MTEKLSKLEGLAAGGDDGHTLLQQHQKEMLAKLREIRAAMATETGELDSV
KEANAEVAKLREVIKRRDYRILHLTRALEAGASSSADPGSA*
back to top