prot_Ecto-sp13_S_contig1429.3328.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1429.3328.1
Unique Nameprot_Ecto-sp13_S_contig1429.3328.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length683
Homology
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: D7FKF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF5_ECTSI)

HSP 1 Score: 1003 bits (2592), Expect = 0.000e+0
Identity = 525/544 (96.51%), Postives = 531/544 (97.61%), Query Frame = 0
Query:  106 QQDAPEPEDKGDKISEEE-DAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKRGG 648
            QQDAPE EDKGDKI+EEE DAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGG       GVALDTPA PGDGKRPSHN KKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFI+VPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQE+IDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYG MLGETVPEILRTNLANT+LYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAG+LGCLEE+LTIVALLSVESIWFTRSK GG
Sbjct:  102 QQDAPESEDKGDKIAEEEEDAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGXXXXXXXGVALDTPA-PGDGKRPSHNNKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFINVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEKIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGGMLGETVPEILRTNLANTVLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGELGCLEEVLTIVALLSVESIWFTRSKGGG 644          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: W7TQ49_9STRA (Atp-dependent rna helicase dhx8 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ49_9STRA)

HSP 1 Score: 558 bits (1437), Expect = 5.680e-186
Identity = 301/528 (57.01%), Postives = 372/528 (70.45%), Query Frame = 0
Query:  119 ISEEEDAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 646
            I  E    E LPV  +K ELM+AV  ++V+VC GETGSGKTTQ PQYL                    +DE    D P                LV VTQPRRVAA SVA RVA+ER  +LGEEVGY IRFED TGP+TRIK++TDG LVRECL DP L +Y  +MLDEAHERS++TD+LFGL+KRAL+ R DL+ V+TSATLDV+ FA +FD CP   +P RTH V VYHSKT+ +MT TGP+S  YV+  VD++ K+HRTQ  GH+LAF TGQDEI++A  LL+   A     +   G++         ++V+PL+G+LS E Q  AF     G RK ++ATNIAETSVTVPGVR+VVD G+VKQKTY+PARRMESLVVVPIS+VAA+QRAGRAGRT PGQCYRLY+R C   M+ ETVPEI R NLAN LLYLKVLGV D++ FD+ + P++DQ  EAL  L+ LGALD  G+ T  G+ M+R PL+P+LSR +L+A + GCL E+LTI A+LSVE+IWF+R  +
Sbjct:  107 IDPEHQHEEILPVYHYKAELMQAVCENRVVVCKGETGSGKTTQFPQYL--------------------RDE---FDPPG---------------LVGVTQPRRVAAVSVATRVAEERHVKLGEEVGYQIRFEDCTGPQTRIKFVTDGCLVRECLADPLLIKYSFIMLDEAHERSVNTDLLFGLVKRALSMRLDLKLVVTSATLDVKAFAEYFDKCPVKEIPVRTHPVSVYHSKTKVIMTRTGPSSSAYVQSLVDVVIKIHRTQDEGHILAFLTGQDEIDKACSLLTAQAADLGASQGEAGMD---------LLVLPLYGSLSGEQQLRAFHPVGPGTRKCIVATNIAETSVTVPGVRYVVDSGFVKQKTYNPARRMESLVVVPISRVAAEQRAGRAGRTGPGQCYRLYSRECLEGMMPETVPEICRCNLANVLLYLKVLGVPDVVDFDYFEAPSKDQLAEALLMLHSLGALDDSGQVTPLGQSMARLPLDPALSRAILQAVEEGCLREVLTIAAMLSVENIWFSRKPK 587          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A835YMR5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR5_9STRA)

HSP 1 Score: 513 bits (1322), Expect = 1.240e-168
Identity = 302/552 (54.71%), Postives = 358/552 (64.86%), Query Frame = 0
Query:  128 PLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQ------VMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEE-EADNGVS-EMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVV--------------------------PISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSK 645
            PLPV LF+ ELM  +  +QV+VCTGETGSGKTTQIPQYL E +           G D+    G                      L+ VTQPRRVAA SVAKRVA+ERG RLG EVGYSIRFEDRT   T IKYMTDG+L+RE + DP LSRY  +MLDEAHERSI TD+LFGLLK+ALA+RP+L+AVI+SATLDV RFAA+F+ CP ++VPGR   VD+YHSKT+Q      +MT +GPAS RYVED+V    K+H TQGPGHVL F TGQ+EIE A+R LS A    E+   A G ++  A  GV  +M VVPL+GAL+A+AQ++AF      VRKV++ATNIAETSVTVPGVRFVVD GYVKQK YD  RRMESLVVV                          PISQ AA QRAGRAGRT  GQCYRLY+R+C                                L FD+LDPP EDQ +EALQ L+CLGA+D DG        MSRFPLEP LSR L+ +  L C +E+LT+VA+LSVE+IW+ R +
Sbjct:  119 PLPVALFRGELMSIIAANQVIVCTGETGSGKTTQIPQYLREELI----------GDDRGGGAG----------------------LIGVTQPRRVAAMSVAKRVAEERGVRLGGEVGYSIRFEDRTSAATVIKYMTDGMLIREVMADPLLSRYAAIMLDEAHERSIHTDVLFGLLKQALAKRPELKAVISSATLDVSRFAAYFNNCPVVTVPGRAFPVDIYHSKTKQASAGHRIMTVSGPASYRYVEDSVKTALKIHTTQGPGHVLLFLTGQEEIEEATRQLSAAP---ELSADANGSKDGSAQLGVKMKMRVVPLYGALTADAQSEAFAPVPGNVRKVIVATNIAETSVTVPGVRFVVDAGYVKQKVYDLQRRMESLVVVXXXXXXXXXXXXXXXXXXXXXXXXXVPISQAAAAQRAGRAGRTHAGQCYRLYSRDC--------------------------------LTFDYLDPPDEDQLVEALQLLHCLGAIDADGA-------MSRFPLEPCLSRALVASTLLNCTDEMLTVVAMLSVETIWYKRPR 596          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A1V9ZEA9_9STRA (Pre-mRNA-splicing factor ATP-dependent RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEA9_9STRA)

HSP 1 Score: 503 bits (1294), Expect = 1.870e-168
Identity = 269/521 (51.63%), Postives = 361/521 (69.29%), Query Frame = 0
Query:  129 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNG-VSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 646
            LPV  +K EL++A+  +Q++VC GETGSGKTTQ+PQ+LLE                            A  GD KR         + +TQPRRVA T+VAKRV +E        + VGY+IRF+D+    T+IK+MTDG+LVRECL+DP L +Y ++MLDEAHERSI TDILFGLLK  L +RPDL+ ++TSATLD ERFAAFF+ CP   VPGR+  VD+YHSKT Q+M  TGP S  Y++ AVD   ++H  +  GH+L F TGQ EIE A  +L+  + +   + R        DN  +  ++V+PL+GALS+  Q   F  +    RKV++ TNIAETS+TV GV++VVD G+ KQK Y+P R +ESL++VPISQV+AQQRAGRAGRT+ G+CYRLY++  Y +ML ETVPEI R+NLANT+LYLKVLG+ D++ F++LDPPAED  ++AL+ LY LGA++  G  TDTG+ M++FPLEP L R LLE  +LGC +E++ IVA+LSVE+I+  ++++
Sbjct:   45 LPVGKYKAELLQAIEANQIIVCIGETGSGKTTQLPQFLLE----------------------------AGYGDSKR---------IGITQPRRVATTAVAKRVGEELAASGVSPKAVGYTIRFDDQCTTETKIKFMTDGILVRECLQDPLLQQYSIIMLDEAHERSIHTDILFGLLKSMLKQRPDLKLIVTSATLDDERFAAFFNDCPVFRVPGRSFPVDIYHSKTHQIMGKTGPVST-YIQAAVDTTLQIHTHEPEGHILLFLTGQKEIEEACSMLNSRMRRFNEEERL-----NPDNPRIPRLLVLPLYGALSSAKQRRIFNPSSG--RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPLRGLESLIIVPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYESMLPETVPEIQRSNLANTILYLKVLGISDVVGFNYLDPPAEDAIIDALRQLYVLGAINDAGEVTDTGKDMAQFPLEPRLGRCLLEGIRLGCGKELMIIVAMLSVETIFMYQNEK 520          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A067D8G3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D8G3_SAPPC)

HSP 1 Score: 499 bits (1286), Expect = 3.050e-164
Identity = 270/520 (51.92%), Postives = 356/520 (68.46%), Query Frame = 0
Query:  129 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 646
            LPV  +K+ L+ A+  +Q++VC GETGSGKTTQ+PQ+LLE                            A  G  KR         +A+TQPRRVA T+VAKRV +E        + VGY+IRF+D+    T+IK+MTDG+LVRECL+DP L +Y ++MLDEAHERSI TDILFGLLK  L+ R DL+ ++TSATLD ERFAAFF+GCP   VPGR+  VD+YHSK  Q+M  TGP S  Y+  AVD   ++H  +  GH+L F TGQ EI+ A + L+          + + +  +A   V+   V+PL+GALS+  Q   F+ +R   RK+++ TNIAETS+TV GV++VVD G+ KQK Y+PAR +ESLVVVP+SQV+AQQRAGRAGRT+ G+CYRLY++  Y +ML ETVPEI R+NLANT+LYLKVLG+ D++ FD+LDPPAED  L+AL  LY LGALD DG  T+ G+ M++FPLEP L+R LLE  +L C  E +TIVA+LSVE+++  ++ R
Sbjct:   54 LPVGKYKEALLDAIAANQIIVCIGETGSGKTTQLPQFLLE----------------------------AGYGATKR---------IAITQPRRVATTAVAKRVGEELAASGLSPKAVGYTIRFDDQCTSETKIKFMTDGILVRECLQDPLLQQYSIIMLDEAHERSIHTDILFGLLKSILSARSDLKLIVTSATLDDERFAAFFNGCPVFRVPGRSFPVDIYHSKQHQIMGKTGPVST-YITAAVDATLQIHSNEPAGHILLFLTGQKEIDDACKELT----------KRLQLLRDASPDVARFHVLPLYGALSSAKQRRIFEPSRD--RKIIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPARGLESLVVVPVSQVSAQQRAGRAGRTSAGKCYRLYSKQSYESMLPETVPEIQRSNLANTILYLKVLGIADVVGFDYLDPPAEDAILDALHQLYILGALDDDGSVTEIGKDMAQFPLEPRLARVLLEGIQLDCANEAMTIVAMLSVENVFMFQTNR 523          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A1V9ZQZ5_9STRA (Pre-mRNA-splicing factor ATP-dependent RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZQZ5_9STRA)

HSP 1 Score: 498 bits (1282), Expect = 1.250e-163
Identity = 269/520 (51.73%), Postives = 354/520 (68.08%), Query Frame = 0
Query:  129 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 646
            LPV  +K +L+ A+  +Q++VC GETGSGKTTQ+PQ+LLE                            A  G+ KR         + +TQPRRVA T+VAKRV +E            Y+IRF+D+    T+IK+MTDG+LVRECL DP L++Y ++MLDEAHERSI TDILFGLLK  L +RPDL+ ++TSATLD ERFAAFF+GCP   VPGR+  VD+YHSKT Q+M   GP S  Y+  AVD + ++H  +  GH+L F TGQ EI+ A ++L+  V +   D          D  VS ++V+PL+GALS+  Q   F+  R   RKV++ TNIAETS+TV GV++VVD G+ KQK Y+P R +ESLVVVPISQV+AQQRAGRAGRT+ G+CYRLY++  Y  ML ETVPEI R+NLANT+LYLKVLG+ D++ FD+LDPPAED  ++AL+ LY LGALD+ G  T TG+ M++FPLEP L+R LLE  +L C  E + +VA+LSVE+++  ++ R
Sbjct:   49 LPVGQYKAQLLDAIAANQIIVCIGETGSGKTTQLPQFLLE----------------------------AGYGESKR---------IGITQPRRVATTAVAKRVGEELAASGTSPSTASYTIRFDDQCTAATKIKFMTDGILVRECLLDPLLTQYSIIMLDEAHERSIHTDILFGLLKSILVKRPDLKLIVTSATLDDERFAAFFNGCPVFRVPGRSFPVDIYHSKTHQIMGKAGPVST-YIAAAVDAVLQIHAAEPDGHILLFLTGQKEIDDACQMLTTRVQRLRDD----------DPAVSRLLVLPLYGALSSAKQRRIFEPTRD--RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPERGLESLVVVPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYETMLPETVPEIQRSNLANTILYLKVLGIHDVVGFDYLDPPAEDAIVDALRQLYILGALDERGVVTATGKDMAQFPLEPRLARVLLEGIRLDCAREAMIVVAMLSVENVFMFQTDR 518          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A8K1FAT5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAT5_PYTOL)

HSP 1 Score: 496 bits (1276), Expect = 2.330e-162
Identity = 277/514 (53.89%), Postives = 347/514 (67.51%), Query Frame = 0
Query:  129 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR-LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAG-VRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIW 640
            LP    + EL+ A+R  QV++C GETGSGKTTQ+PQYLL      DA+   S                         SH+     V +TQPRRVA  SVA+RVA+E     LG  VGYSIRF+DRT   TR+K++TDGVLVRECL DP LS+Y VVMLDEAHERS+ TDILFGLLK+ LA RPDLR ++TSATLD +RFAAFF+  P +++PGR+  VD++H+K  Q+M   GP S  Y+  AV+   +VH ++  GHVL F TGQ EIE A + L           R +  E    +G+  M VVPL+GALS   Q + F    A   RKV++ATNIAETS+T+ GVRFVVD G+ KQK Y+P  +ME+LVVVP+S+V+AQQRAGRAGRTAPG+C+RLY +  Y  ML E++PEI RTNLANT+LYLKVLG+ D+L F FLDPP ED  L+ALQ LY L ALD  G  T  GR M+ FPLEP L+R L+EA  L C +E+  IVA+LSVE+++
Sbjct:   57 LPAAAHRHELLAALRAHQVVICVGETGSGKTTQLPQYLL------DAEDLVSS------------------------SHS-----VVITQPRRVATVSVAQRVAEELAAGPLGGRVGYSIRFDDRTSTATRLKFVTDGVLVRECLRDPLLSQYAVVMLDEAHERSLHTDILFGLLKQVLATRPDLRLLVTSATLDTKRFAAFFNKAPIVTIPGRSFPVDIFHAKQMQIMGTRGPISS-YLRSAVETTLQVHNSEDAGHVLVFLTGQQEIEDACKQL-----------RRLSDETTRPDGMK-MRVVPLYGALSGRLQREIFAPVDARRTRKVIVATNIAETSLTIDGVRFVVDAGFTKQKVYNPQTQMEALVVVPVSKVSAQQRAGRAGRTAPGKCFRLYAKESYAQMLDESIPEIQRTNLANTVLYLKVLGIQDVLGFAFLDPPEEDAMLDALQQLYELQALDDKGVVTPLGRLMAEFPLEPKLARALMEAVVLECADEMARIVAMLSVENMY 522          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A024UBP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBP0_9STRA)

HSP 1 Score: 492 bits (1266), Expect = 4.830e-161
Identity = 264/525 (50.29%), Postives = 351/525 (66.86%), Query Frame = 0
Query:  129 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGC--RLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEM---IVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKRGG 648
            LPV  FK +++  +  +Q++VC GETGSGKTTQIPQ+LLE             G  K K                          +A+TQPRRVA  +VAKRV +E        + VGY+IRF+D T   T+IK+MTDG+LVRECL+DP LS Y +VMLDEAHERSI TDILFGLL   L++R DL+ ++TSATLD ++F+ FFD CP + +PGR+  VD+YHSK  Q+M  +GP S  Y++ AVD   ++H  +  GH+L F TGQ EIE A  LL     ++ +D+ A       D GV+ +   +++PL+GAL+++ Q   F       RK+++ TNIAETS+TV GV++VVD G+ KQK Y+P R MESLVV+PISQV+AQQRAGRAGRT+ G+CYRLY++  Y AM  ET+PEI R+NLANT+LYLKVLG+DD++ F +LDPP ED  L+ALQ LY LGALD  G  T TG+ M++FPLEP L+R LLEA +L C  ++  IVA+LSVE++     ++ G
Sbjct:   73 LPVGQFKQQILDTIESNQIVVCIGETGSGKTTQIPQFLLEA------------GYAKSK-------------------------RIAITQPRRVATVAVAKRVGEELAASGHSIQSVGYTIRFDDHTSASTQIKFMTDGILVRECLQDPLLSAYSIVMLDEAHERSIHTDILFGLLHSILSKRRDLKLIVTSATLDADKFSQFFDNCPVVQIPGRSFPVDIYHSKQHQIMGKSGPVST-YIQSAVDTTMQIHEHEPEGHILVFLTGQKEIEEACALL-----RKRLDQLAH------DGGVAALPHTLILPLYGALTSDKQRRIFSPCGKS-RKIIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPVRGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKKSYSAMFNETIPEIQRSNLANTILYLKVLGIDDVVGFGYLDPPQEDSILDALQQLYTLGALDDTGDVTATGKAMAQFPLEPRLARVLLEAIRLDCAADVTRIVAMLSVENVVLPYQEKDG 547          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A485LRU1_9STRA (Aste57867_24935 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRU1_9STRA)

HSP 1 Score: 486 bits (1252), Expect = 1.320e-159
Identity = 270/529 (51.04%), Postives = 349/529 (65.97%), Query Frame = 0
Query:  129 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSR----------------TLLEAGKLGCLEEILTIVALLSVESI 639
            LPV  FKD L+  +  +Q++VC GETGSGKTTQ+PQ+LLE                     G A              +NK+   +A+TQPRRVA  +VAKRV +E        + VGY+IRF+D T   T+IK+MTDG+LVRECL+DP LS Y ++MLDEAHERSI TDILFGLL+  L +R DL+ ++TSATLD ++F+AFF  CP + VPGR+  VD+YHSK  Q+M  +GP S  Y++ AVD   ++H  +  GH+L F TGQ EIE A  LL     ++ +DR A       D  +  M ++PL+GALS+E Q   F     G RKV++ TNIAETS+TV GV++VVD G+ KQK Y+PAR MESLVV+PISQV+AQQRAGRAGRT+ G+CYRLY++  Y  M  ET+PEI R+NLANT+LYLKVLG+DD++ F ++DPP ED  L+ALQ LY LGALD  G  T TG+ M++FPLEP L+R                 LLEA +L C  EI  IVA+LSVE++
Sbjct:   16 LPVGQFKDTLLDTINKNQIVVCIGETGSGKTTQLPQFLLEA--------------------GYA-------------ENNKR---IAITQPRRVATVAVAKRVGEELAASGISSKSVGYTIRFDDHTSASTQIKFMTDGILVRECLQDPLLSAYSIIMLDEAHERSIHTDILFGLLQSILKQRRDLKLLVTSATLDADKFSAFFHNCPVVQVPGRSFPVDIYHSKQHQIMGKSGPVST-YIQAAVDTTMQIHMAEPEGHILVFLTGQKEIEEACALL-----RKRLDREAQ------DQSLQPMHILPLYGALSSEKQRRIFNPTTHG-RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPARGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYNTMFPETIPEIQRSNLANTILYLKVLGIDDVVGFRYVDPPDEDAILDALQQLYVLGALDDVGDVTPTGKDMAQFPLEPRLARYDSFRDALVIHRELSSVLLEAIRLDCPREITRIVAMLSVENV 495          
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: W4H1E8_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1E8_9STRA)

HSP 1 Score: 488 bits (1256), Expect = 1.560e-159
Identity = 263/514 (51.17%), Postives = 347/514 (67.51%), Query Frame = 0
Query:  129 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADE---RGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESI 639
            LPV  FK  ++  +  +Q++VC GETGSGKTTQIPQ+LLE                     G A          KR         +A+TQPRRVA  +VAKRV +E    G  +   VGY+IRF+D T   T+IK+MTDG+LVRECL+DP LS Y ++MLDEAHERSI TDILFGLL+  LA+R DL+ ++TSATLD ++F+AFF  CP + +PGR+  VD+YHSK  Q+M  +GP S  Y++ AVD   ++H  +  GH+L F TGQ EIE A  L+ + + Q         + +E  N +  M+V+PL+GALS++ Q   F S  A  RKV++ TNIAETS+TV GV++VVD G+ KQK Y+P   MESLVV+PISQV+AQQRAGRAGRT+ G+CYRLY++  Y  M  ET+PEI R+NLANT+LYLKVLG+DD++ F +LDPP E   L+AL  LY LGALD+ G  T TG  M++FPLEP L+R LLEA +L C ++I  +VA+L+VE++
Sbjct:   70 LPVGQFKQHILDTIASNQIVVCIGETGSGKTTQIPQFLLEA--------------------GYAT--------SKR---------IAITQPRRVATVAVAKRVGEELEASGLSV-HAVGYTIRFDDHTSASTKIKFMTDGILVRECLQDPLLSSYSIIMLDEAHERSIHTDILFGLLQSILAKRSDLKLLVTSATLDADKFSAFFHNCPVVQIPGRSFPVDIYHSKQHQIMGKSGPLST-YIQSAVDTTLQIHMHEPDGHILVFLTGQKEIEDACALIRKRLEQ---------LADEQRNSLPHMLVLPLYGALSSDKQRRIFSSCGAS-RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPMTGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKKSYATMFTETIPEIQRSNLANTILYLKVLGIDDVVGFGYLDPPDEHAILDALHQLYTLGALDERGNVTGTGTDMAQFPLEPRLARVLLEAMRLDCADDITRVVAMLTVENV 534          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKF5_ECTSI0.000e+096.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TQ49_9STRA5.680e-18657.01Atp-dependent rna helicase dhx8 n=2 Tax=Nannochlor... [more]
A0A835YMR5_9STRA1.240e-16854.71P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1V9ZEA9_9STRA1.870e-16851.63Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A067D8G3_SAPPC3.050e-16451.92Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZQZ5_9STRA1.250e-16351.73Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A8K1FAT5_PYTOL2.330e-16253.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UBP0_9STRA4.830e-16150.29Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A485LRU1_9STRA1.320e-15951.04Aste57867_24935 protein n=1 Tax=Aphanomyces stella... [more]
W4H1E8_9STRA1.560e-15951.17Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 127..348
e-value: 2.2E-30
score: 116.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 139..339
score: 18.708
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 397..518
e-value: 3.0E-14
score: 63.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 378..517
e-value: 7.3E-10
score: 39.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 366..558
score: 14.632
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 578..659
e-value: 2.6E-18
score: 76.8
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 579..644
e-value: 8.0E-20
score: 71.1
NoneNo IPR availableGENE3D3.40.50.300coord: 342..537
e-value: 7.3E-57
score: 193.8
NoneNo IPR availableGENE3D1.20.120.1080coord: 561..647
e-value: 2.0E-25
score: 90.6
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 66..169
coord: 212..643
NoneNo IPR availablePANTHERPTHR18934:SF85ATP-DEPENDENT RNA HELICASE DHX8coord: 66..169
coord: 212..643
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 281..290
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 137..640

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1429contigEcto-sp13_S_contig1429:3441..6891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1429.3328.1mRNA_Ecto-sp13_S_contig1429.3328.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1429 3273..7182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1429.3328.1 ID=prot_Ecto-sp13_S_contig1429.3328.1|Name=mRNA_Ecto-sp13_S_contig1429.3328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=683bp
MGNDDRHRRSSDRERARGEHVDSHSGYPSGSSRHGDHDDRRGANDGCTSR
KASKRSRSRSRSRSRSSGSDHQRRRRERGHSRSRSRERIHERSRRKSRWG
KHERRQQDAPEPEDKGDKISEEEDAAEPLPVTLFKDELMKAVRGSQVLVC
TGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPG
DGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFE
DRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFG
LLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHS
KTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERAS
RLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKS
ARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVV
PISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANT
LLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGR
RMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKRGGGG
GGGGGVGGVPARSRASDRPKRALAASRGGAES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR007502Helicase-assoc_dom
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase