mRNA_Ecto-sp13_S_contig1429.3328.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: D7FKF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF5_ECTSI) HSP 1 Score: 1003 bits (2592), Expect = 0.000e+0 Identity = 525/544 (96.51%), Postives = 531/544 (97.61%), Query Frame = 1
Query: 484 QQDAPEPEDKGDKISEEE-DAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKRGG 2112
QQDAPE EDKGDKI+EEE DAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGG GVALDTPA PGDGKRPSHN KKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFI+VPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQE+IDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYG MLGETVPEILRTNLANT+LYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAG+LGCLEE+LTIVALLSVESIWFTRSK GG
Sbjct: 102 QQDAPESEDKGDKIAEEEEDAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGXXXXXXXGVALDTPA-PGDGKRPSHNNKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFINVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEKIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGGMLGETVPEILRTNLANTVLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGELGCLEEVLTIVALLSVESIWFTRSKGGG 644
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: W7TQ49_9STRA (Atp-dependent rna helicase dhx8 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ49_9STRA) HSP 1 Score: 558 bits (1437), Expect = 8.510e-184 Identity = 301/528 (57.01%), Postives = 372/528 (70.45%), Query Frame = 1
Query: 523 ISEEEDAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 2106
I E E LPV +K ELM+AV ++V+VC GETGSGKTTQ PQYL +DE D P LV VTQPRRVAA SVA RVA+ER +LGEEVGY IRFED TGP+TRIK++TDG LVRECL DP L +Y +MLDEAHERS++TD+LFGL+KRAL+ R DL+ V+TSATLDV+ FA +FD CP +P RTH V VYHSKT+ +MT TGP+S YV+ VD++ K+HRTQ GH+LAF TGQDEI++A LL+ A + G++ ++V+PL+G+LS E Q AF G RK ++ATNIAETSVTVPGVR+VVD G+VKQKTY+PARRMESLVVVPIS+VAA+QRAGRAGRT PGQCYRLY+R C M+ ETVPEI R NLAN LLYLKVLGV D++ FD+ + P++DQ EAL L+ LGALD G+ T G+ M+R PL+P+LSR +L+A + GCL E+LTI A+LSVE+IWF+R +
Sbjct: 107 IDPEHQHEEILPVYHYKAELMQAVCENRVVVCKGETGSGKTTQFPQYL--------------------RDE---FDPPG---------------LVGVTQPRRVAAVSVATRVAEERHVKLGEEVGYQIRFEDCTGPQTRIKFVTDGCLVRECLADPLLIKYSFIMLDEAHERSVNTDLLFGLVKRALSMRLDLKLVVTSATLDVKAFAEYFDKCPVKEIPVRTHPVSVYHSKTKVIMTRTGPSSSAYVQSLVDVVIKIHRTQDEGHILAFLTGQDEIDKACSLLTAQAADLGASQGEAGMD---------LLVLPLYGSLSGEQQLRAFHPVGPGTRKCIVATNIAETSVTVPGVRYVVDSGFVKQKTYNPARRMESLVVVPISRVAAEQRAGRAGRTGPGQCYRLYSRECLEGMMPETVPEICRCNLANVLLYLKVLGVPDVVDFDYFEAPSKDQLAEALLMLHSLGALDDSGQVTPLGQSMARLPLDPALSRAILQAVEEGCLREVLTIAAMLSVENIWFSRKPK 587
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A835YMR5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR5_9STRA) HSP 1 Score: 513 bits (1322), Expect = 1.580e-166 Identity = 302/552 (54.71%), Postives = 358/552 (64.86%), Query Frame = 1
Query: 550 PLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQ------VMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEE-EADNGVS-EMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVV--------------------------PISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSK 2103
PLPV LF+ ELM + +QV+VCTGETGSGKTTQIPQYL E + G D+ G L+ VTQPRRVAA SVAKRVA+ERG RLG EVGYSIRFEDRT T IKYMTDG+L+RE + DP LSRY +MLDEAHERSI TD+LFGLLK+ALA+RP+L+AVI+SATLDV RFAA+F+ CP ++VPGR VD+YHSKT+Q +MT +GPAS RYVED+V K+H TQGPGHVL F TGQ+EIE A+R LS A E+ A G ++ A GV +M VVPL+GAL+A+AQ++AF VRKV++ATNIAETSVTVPGVRFVVD GYVKQK YD RRMESLVVV PISQ AA QRAGRAGRT GQCYRLY+R+C L FD+LDPP EDQ +EALQ L+CLGA+D DG MSRFPLEP LSR L+ + L C +E+LT+VA+LSVE+IW+ R +
Sbjct: 119 PLPVALFRGELMSIIAANQVIVCTGETGSGKTTQIPQYLREELI----------GDDRGGGAG----------------------LIGVTQPRRVAAMSVAKRVAEERGVRLGGEVGYSIRFEDRTSAATVIKYMTDGMLIREVMADPLLSRYAAIMLDEAHERSIHTDVLFGLLKQALAKRPELKAVISSATLDVSRFAAYFNNCPVVTVPGRAFPVDIYHSKTKQASAGHRIMTVSGPASYRYVEDSVKTALKIHTTQGPGHVLLFLTGQEEIEEATRQLSAAP---ELSADANGSKDGSAQLGVKMKMRVVPLYGALTADAQSEAFAPVPGNVRKVIVATNIAETSVTVPGVRFVVDAGYVKQKVYDLQRRMESLVVVXXXXXXXXXXXXXXXXXXXXXXXXXVPISQAAAAQRAGRAGRTHAGQCYRLYSRDC--------------------------------LTFDYLDPPDEDQLVEALQLLHCLGAIDADGA-------MSRFPLEPCLSRALVASTLLNCTDEMLTVVAMLSVETIWYKRPR 596
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A1V9ZEA9_9STRA (Pre-mRNA-splicing factor ATP-dependent RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEA9_9STRA) HSP 1 Score: 503 bits (1294), Expect = 2.290e-166 Identity = 269/521 (51.63%), Postives = 361/521 (69.29%), Query Frame = 1
Query: 553 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNG-VSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 2106
LPV +K EL++A+ +Q++VC GETGSGKTTQ+PQ+LLE A GD KR + +TQPRRVA T+VAKRV +E + VGY+IRF+D+ T+IK+MTDG+LVRECL+DP L +Y ++MLDEAHERSI TDILFGLLK L +RPDL+ ++TSATLD ERFAAFF+ CP VPGR+ VD+YHSKT Q+M TGP S Y++ AVD ++H + GH+L F TGQ EIE A +L+ + + + R DN + ++V+PL+GALS+ Q F + RKV++ TNIAETS+TV GV++VVD G+ KQK Y+P R +ESL++VPISQV+AQQRAGRAGRT+ G+CYRLY++ Y +ML ETVPEI R+NLANT+LYLKVLG+ D++ F++LDPPAED ++AL+ LY LGA++ G TDTG+ M++FPLEP L R LLE +LGC +E++ IVA+LSVE+I+ ++++
Sbjct: 45 LPVGKYKAELLQAIEANQIIVCIGETGSGKTTQLPQFLLE----------------------------AGYGDSKR---------IGITQPRRVATTAVAKRVGEELAASGVSPKAVGYTIRFDDQCTTETKIKFMTDGILVRECLQDPLLQQYSIIMLDEAHERSIHTDILFGLLKSMLKQRPDLKLIVTSATLDDERFAAFFNDCPVFRVPGRSFPVDIYHSKTHQIMGKTGPVST-YIQAAVDTTLQIHTHEPEGHILLFLTGQKEIEEACSMLNSRMRRFNEEERL-----NPDNPRIPRLLVLPLYGALSSAKQRRIFNPSSG--RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPLRGLESLIIVPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYESMLPETVPEIQRSNLANTILYLKVLGISDVVGFNYLDPPAEDAIIDALRQLYVLGAINDAGEVTDTGKDMAQFPLEPRLGRCLLEGIRLGCGKELMIIVAMLSVETIFMYQNEK 520
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A067D8G3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D8G3_SAPPC) HSP 1 Score: 499 bits (1286), Expect = 3.690e-162 Identity = 270/520 (51.92%), Postives = 356/520 (68.46%), Query Frame = 1
Query: 553 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 2106
LPV +K+ L+ A+ +Q++VC GETGSGKTTQ+PQ+LLE A G KR +A+TQPRRVA T+VAKRV +E + VGY+IRF+D+ T+IK+MTDG+LVRECL+DP L +Y ++MLDEAHERSI TDILFGLLK L+ R DL+ ++TSATLD ERFAAFF+GCP VPGR+ VD+YHSK Q+M TGP S Y+ AVD ++H + GH+L F TGQ EI+ A + L+ + + + +A V+ V+PL+GALS+ Q F+ +R RK+++ TNIAETS+TV GV++VVD G+ KQK Y+PAR +ESLVVVP+SQV+AQQRAGRAGRT+ G+CYRLY++ Y +ML ETVPEI R+NLANT+LYLKVLG+ D++ FD+LDPPAED L+AL LY LGALD DG T+ G+ M++FPLEP L+R LLE +L C E +TIVA+LSVE+++ ++ R
Sbjct: 54 LPVGKYKEALLDAIAANQIIVCIGETGSGKTTQLPQFLLE----------------------------AGYGATKR---------IAITQPRRVATTAVAKRVGEELAASGLSPKAVGYTIRFDDQCTSETKIKFMTDGILVRECLQDPLLQQYSIIMLDEAHERSIHTDILFGLLKSILSARSDLKLIVTSATLDDERFAAFFNGCPVFRVPGRSFPVDIYHSKQHQIMGKTGPVST-YITAAVDATLQIHSNEPAGHILLFLTGQKEIDDACKELT----------KRLQLLRDASPDVARFHVLPLYGALSSAKQRRIFEPSRD--RKIIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPARGLESLVVVPVSQVSAQQRAGRAGRTSAGKCYRLYSKQSYESMLPETVPEIQRSNLANTILYLKVLGIADVVGFDYLDPPAEDAILDALHQLYILGALDDDGSVTEIGKDMAQFPLEPRLARVLLEGIQLDCANEAMTIVAMLSVENVFMFQTNR 523
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A1V9ZQZ5_9STRA (Pre-mRNA-splicing factor ATP-dependent RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZQZ5_9STRA) HSP 1 Score: 498 bits (1282), Expect = 1.500e-161 Identity = 269/520 (51.73%), Postives = 354/520 (68.08%), Query Frame = 1
Query: 553 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKR 2106
LPV +K +L+ A+ +Q++VC GETGSGKTTQ+PQ+LLE A G+ KR + +TQPRRVA T+VAKRV +E Y+IRF+D+ T+IK+MTDG+LVRECL DP L++Y ++MLDEAHERSI TDILFGLLK L +RPDL+ ++TSATLD ERFAAFF+GCP VPGR+ VD+YHSKT Q+M GP S Y+ AVD + ++H + GH+L F TGQ EI+ A ++L+ V + D D VS ++V+PL+GALS+ Q F+ R RKV++ TNIAETS+TV GV++VVD G+ KQK Y+P R +ESLVVVPISQV+AQQRAGRAGRT+ G+CYRLY++ Y ML ETVPEI R+NLANT+LYLKVLG+ D++ FD+LDPPAED ++AL+ LY LGALD+ G T TG+ M++FPLEP L+R LLE +L C E + +VA+LSVE+++ ++ R
Sbjct: 49 LPVGQYKAQLLDAIAANQIIVCIGETGSGKTTQLPQFLLE----------------------------AGYGESKR---------IGITQPRRVATTAVAKRVGEELAASGTSPSTASYTIRFDDQCTAATKIKFMTDGILVRECLLDPLLTQYSIIMLDEAHERSIHTDILFGLLKSILVKRPDLKLIVTSATLDDERFAAFFNGCPVFRVPGRSFPVDIYHSKTHQIMGKAGPVST-YIAAAVDAVLQIHAAEPDGHILLFLTGQKEIDDACQMLTTRVQRLRDD----------DPAVSRLLVLPLYGALSSAKQRRIFEPTRD--RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPERGLESLVVVPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYETMLPETVPEIQRSNLANTILYLKVLGIHDVVGFDYLDPPAEDAIVDALRQLYILGALDERGVVTATGKDMAQFPLEPRLARVLLEGIRLDCAREAMIVVAMLSVENVFMFQTDR 518
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A8K1FAT5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAT5_PYTOL) HSP 1 Score: 496 bits (1276), Expect = 2.770e-160 Identity = 277/514 (53.89%), Postives = 347/514 (67.51%), Query Frame = 1
Query: 553 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR-LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAG-VRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIW 2088
LP + EL+ A+R QV++C GETGSGKTTQ+PQYLL DA+ S SH+ V +TQPRRVA SVA+RVA+E LG VGYSIRF+DRT TR+K++TDGVLVRECL DP LS+Y VVMLDEAHERS+ TDILFGLLK+ LA RPDLR ++TSATLD +RFAAFF+ P +++PGR+ VD++H+K Q+M GP S Y+ AV+ +VH ++ GHVL F TGQ EIE A + L R + E +G+ M VVPL+GALS Q + F A RKV++ATNIAETS+T+ GVRFVVD G+ KQK Y+P +ME+LVVVP+S+V+AQQRAGRAGRTAPG+C+RLY + Y ML E++PEI RTNLANT+LYLKVLG+ D+L F FLDPP ED L+ALQ LY L ALD G T GR M+ FPLEP L+R L+EA L C +E+ IVA+LSVE+++
Sbjct: 57 LPAAAHRHELLAALRAHQVVICVGETGSGKTTQLPQYLL------DAEDLVSS------------------------SHS-----VVITQPRRVATVSVAQRVAEELAAGPLGGRVGYSIRFDDRTSTATRLKFVTDGVLVRECLRDPLLSQYAVVMLDEAHERSLHTDILFGLLKQVLATRPDLRLLVTSATLDTKRFAAFFNKAPIVTIPGRSFPVDIFHAKQMQIMGTRGPISS-YLRSAVETTLQVHNSEDAGHVLVFLTGQQEIEDACKQL-----------RRLSDETTRPDGMK-MRVVPLYGALSGRLQREIFAPVDARRTRKVIVATNIAETSLTIDGVRFVVDAGFTKQKVYNPQTQMEALVVVPVSKVSAQQRAGRAGRTAPGKCFRLYAKESYAQMLDESIPEIQRTNLANTVLYLKVLGIQDVLGFAFLDPPEEDAMLDALQQLYELQALDDKGVVTPLGRLMAEFPLEPKLARALMEAVVLECADEMARIVAMLSVENMY 522
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A024UBP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBP0_9STRA) HSP 1 Score: 492 bits (1266), Expect = 5.670e-159 Identity = 264/525 (50.29%), Postives = 351/525 (66.86%), Query Frame = 1
Query: 553 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGC--RLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEM---IVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESIWFTRSKRGG 2112
LPV FK +++ + +Q++VC GETGSGKTTQIPQ+LLE G K K +A+TQPRRVA +VAKRV +E + VGY+IRF+D T T+IK+MTDG+LVRECL+DP LS Y +VMLDEAHERSI TDILFGLL L++R DL+ ++TSATLD ++F+ FFD CP + +PGR+ VD+YHSK Q+M +GP S Y++ AVD ++H + GH+L F TGQ EIE A LL ++ +D+ A D GV+ + +++PL+GAL+++ Q F RK+++ TNIAETS+TV GV++VVD G+ KQK Y+P R MESLVV+PISQV+AQQRAGRAGRT+ G+CYRLY++ Y AM ET+PEI R+NLANT+LYLKVLG+DD++ F +LDPP ED L+ALQ LY LGALD G T TG+ M++FPLEP L+R LLEA +L C ++ IVA+LSVE++ ++ G
Sbjct: 73 LPVGQFKQQILDTIESNQIVVCIGETGSGKTTQIPQFLLEA------------GYAKSK-------------------------RIAITQPRRVATVAVAKRVGEELAASGHSIQSVGYTIRFDDHTSASTQIKFMTDGILVRECLQDPLLSAYSIVMLDEAHERSIHTDILFGLLHSILSKRRDLKLIVTSATLDADKFSQFFDNCPVVQIPGRSFPVDIYHSKQHQIMGKSGPVST-YIQSAVDTTMQIHEHEPEGHILVFLTGQKEIEEACALL-----RKRLDQLAH------DGGVAALPHTLILPLYGALTSDKQRRIFSPCGKS-RKIIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPVRGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKKSYSAMFNETIPEIQRSNLANTILYLKVLGIDDVVGFGYLDPPQEDSILDALQQLYTLGALDDTGDVTATGKAMAQFPLEPRLARVLLEAIRLDCAADVTRIVAMLSVENVVLPYQEKDG 547
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: A0A485LRU1_9STRA (Aste57867_24935 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRU1_9STRA) HSP 1 Score: 486 bits (1252), Expect = 1.520e-157 Identity = 270/529 (51.04%), Postives = 349/529 (65.97%), Query Frame = 1
Query: 553 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADERGCR--LGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSR----------------TLLEAGKLGCLEEILTIVALLSVESI 2085
LPV FKD L+ + +Q++VC GETGSGKTTQ+PQ+LLE G A +NK+ +A+TQPRRVA +VAKRV +E + VGY+IRF+D T T+IK+MTDG+LVRECL+DP LS Y ++MLDEAHERSI TDILFGLL+ L +R DL+ ++TSATLD ++F+AFF CP + VPGR+ VD+YHSK Q+M +GP S Y++ AVD ++H + GH+L F TGQ EIE A LL ++ +DR A D + M ++PL+GALS+E Q F G RKV++ TNIAETS+TV GV++VVD G+ KQK Y+PAR MESLVV+PISQV+AQQRAGRAGRT+ G+CYRLY++ Y M ET+PEI R+NLANT+LYLKVLG+DD++ F ++DPP ED L+ALQ LY LGALD G T TG+ M++FPLEP L+R LLEA +L C EI IVA+LSVE++
Sbjct: 16 LPVGQFKDTLLDTINKNQIVVCIGETGSGKTTQLPQFLLEA--------------------GYA-------------ENNKR---IAITQPRRVATVAVAKRVGEELAASGISSKSVGYTIRFDDHTSASTQIKFMTDGILVRECLQDPLLSAYSIIMLDEAHERSIHTDILFGLLQSILKQRRDLKLLVTSATLDADKFSAFFHNCPVVQVPGRSFPVDIYHSKQHQIMGKSGPVST-YIQAAVDTTMQIHMAEPEGHILVFLTGQKEIEEACALL-----RKRLDREAQ------DQSLQPMHILPLYGALSSEKQRRIFNPTTHG-RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPARGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYNTMFPETIPEIQRSNLANTILYLKVLGIDDVVGFRYVDPPDEDAILDALQQLYVLGALDDVGDVTPTGKDMAQFPLEPRLARYDSFRDALVIHRELSSVLLEAIRLDCPREITRIVAMLSVENV 495
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Match: W4H1E8_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1E8_9STRA) HSP 1 Score: 488 bits (1256), Expect = 1.800e-157 Identity = 263/514 (51.17%), Postives = 347/514 (67.51%), Query Frame = 1
Query: 553 LPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGKDKDKDEGVALDTPAAPGDGKRPSHNKKKLLVAVTQPRRVAATSVAKRVADE---RGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFISVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEEIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGAMLGETVPEILRTNLANTLLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGKLGCLEEILTIVALLSVESI 2085
LPV FK ++ + +Q++VC GETGSGKTTQIPQ+LLE G A KR +A+TQPRRVA +VAKRV +E G + VGY+IRF+D T T+IK+MTDG+LVRECL+DP LS Y ++MLDEAHERSI TDILFGLL+ LA+R DL+ ++TSATLD ++F+AFF CP + +PGR+ VD+YHSK Q+M +GP S Y++ AVD ++H + GH+L F TGQ EIE A L+ + + Q + +E N + M+V+PL+GALS++ Q F S A RKV++ TNIAETS+TV GV++VVD G+ KQK Y+P MESLVV+PISQV+AQQRAGRAGRT+ G+CYRLY++ Y M ET+PEI R+NLANT+LYLKVLG+DD++ F +LDPP E L+AL LY LGALD+ G T TG M++FPLEP L+R LLEA +L C ++I +VA+L+VE++
Sbjct: 70 LPVGQFKQHILDTIASNQIVVCIGETGSGKTTQIPQFLLEA--------------------GYAT--------SKR---------IAITQPRRVATVAVAKRVGEELEASGLSV-HAVGYTIRFDDHTSASTKIKFMTDGILVRECLQDPLLSSYSIIMLDEAHERSIHTDILFGLLQSILAKRSDLKLLVTSATLDADKFSAFFHNCPVVQIPGRSFPVDIYHSKQHQIMGKSGPLST-YIQSAVDTTLQIHMHEPDGHILVFLTGQKEIEDACALIRKRLEQ---------LADEQRNSLPHMLVLPLYGALSSDKQRRIFSSCGAS-RKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPMTGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKKSYATMFTETIPEIQRSNLANTILYLKVLGIDDVVGFGYLDPPDEHAILDALHQLYTLGALDERGNVTGTGTDMAQFPLEPRLARVLLEAMRLDCADDITRVVAMLTVENV 534 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1429.3328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1429.3328.1 >prot_Ecto-sp13_S_contig1429.3328.1 ID=prot_Ecto-sp13_S_contig1429.3328.1|Name=mRNA_Ecto-sp13_S_contig1429.3328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=683bp MGNDDRHRRSSDRERARGEHVDSHSGYPSGSSRHGDHDDRRGANDGCTSRback to top mRNA from alignment at Ecto-sp13_S_contig1429:3273..7182+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1429.3328.1 ID=mRNA_Ecto-sp13_S_contig1429.3328.1|Name=mRNA_Ecto-sp13_S_contig1429.3328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3910bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1429:3273..7182+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1429:3273..7182+ >mRNA_Ecto-sp13_S_contig1429.3328.1 ID=mRNA_Ecto-sp13_S_contig1429.3328.1|Name=mRNA_Ecto-sp13_S_contig1429.3328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2049bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1429:3273..7182+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |