mRNA_Ecto-sp13_S_contig1429.3327.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: D7FKF4_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF4_ECTSI) HSP 1 Score: 377 bits (968), Expect = 1.500e-129 Identity = 196/201 (97.51%), Postives = 197/201 (98.01%), Query Frame = 1
Query: 52 MGDDYSGPCSCLLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 654
MGD YSGPCSCLLNCVRSWRERDRLRRHTE LRQG LFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLND+KTVEPK GSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS
Sbjct: 1 MGDGYSGPCSCLLNCVRSWRERDRLRRHTELLRQGDLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDIKTVEPK-GSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 200
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A835ZIX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIX0_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.350e-34 Identity = 83/214 (38.79%), Postives = 126/214 (58.88%), Query Frame = 1
Query: 67 SGPCSCLLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRK-----KSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGS-------------VRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 654
SG C CL W + R+ + G + +++ FGFG+ + VRL +TVL W++ ++ G + W +IDL DVK V+ K G L + S+ GDLLLE++ ++G+ RD+W +L + ED+R NPQ A +SV +R+K+ A +Q+H A+R+IE+Q K+DAEARKAR++ E GG++YTA+AMANRS
Sbjct: 6 SGLCPCLSKLFDGWAADAQKRQDKAMMVAGTVCTKKSSRFGFGSRSDKVTVRLSAQSETVLQWQRAAADEEAGGGGEAAWTDIDLTDVKIVD-KRGETGLALVSRRGDLLLEVDMDSGTGXXXXXXXXXXXAQRDAWHAALTDLTEDLRRNPQRAEASRSVAERVKEAALKQKHFAQRSIELQAAKRDAEARKARFMAEAGGLKYTAMAMANRS 218
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A7S2SSX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSX7_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.640e-28 Identity = 78/189 (41.27%), Postives = 111/189 (58.73%), Query Frame = 1
Query: 85 LLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 651
L C S RDR R+ E L +G F+R+ TFGFG G E +++K T++ + EG EI L DV++VEPK G L + SKTGDLLLE+EA +G RD WV ++ AE L + + + M+D+A +Q + KR +E+ K+ AE RKA+ +KE+GG++YTALAMA+R
Sbjct: 8 LCGCCASQEARDRQERN-EVLSKGARFRRKKLTFGFGMGWEDVTMKVKESTATLMWFTSVQEGSNS---GEIRLRDVRSVEPK-GEIGLTVHSKTGDLLLEVEAVDGQTRDYWVPAIAMAAE---LPVKGPLPDRPQTSSMRDRAAKQAYFMKRDLELTAKKQLAEQRKAKLMKESGGLKYTALAMASR 188
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A067CF25_SAPPC (PH domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CF25_SAPPC) HSP 1 Score: 116 bits (290), Expect = 1.570e-27 Identity = 81/199 (40.70%), Postives = 119/199 (59.80%), Query Frame = 1
Query: 88 LNCVRSWRERDRLRRHTE---FLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQK-------SVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 654
LNC+ + +R H E FLR GG+FKR+ +TFG TG E+ +++L PD D VL W S+ K +EI++ +K V P G+ S + S GD+LLELEAE+ +R++WV +LQ V E V+ +A + K S+K +KDQA +Q + KR E++Q + +AE RK + GM+YTA+AMANR+
Sbjct: 4 LNCLEQCQA---IREHDERLTFLRLGGVFKRKKYTFGLHTGAEAVNLQLHPDSDEVLLWTSDSQATGAKP-NEIEVGAIKAVTP-VGTTSFQILSMQGDVLLELEAESADMRNAWVTALQFVCEQVQSEQEANGSNKKGPATPTSLKQMVKDQAAKQAYWHKRQQELKQREIEAEERKKKV--GANGMKYTAIAMANRT 195
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: W4HBN3_9STRA (PH domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4HBN3_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.980e-27 Identity = 81/204 (39.71%), Postives = 120/204 (58.82%), Query Frame = 1
Query: 70 GPCSCLLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQK-------SVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETG--GMQYTALAMANRS 654
G +C C ++ RE D +FL+ GG F R+ +TFG TG ES ++L D D +L W + D K +EI++ D+K+V P +G+A + S G++LLEL+AE+ VR WV +LQ + E+VR + QK S+K +KDQA +Q + KR EM+Q +K+AE RK K+ G GM++TA+AMANR+
Sbjct: 2 GNLNCFEQC-QAIREHDE---RAKFLQAGGAFTRKKYTFGLHTGTESVHLQLHADSDEILLWTSDKQADGAKP-NEIEVGDIKSVLP-SGTAGFQIYSMQGEVLLELDAESAEVRSEWVTALQWICEEVRRTQELNGTQKKHPASASSLKQMVKDQANKQAYWMKRQTEMKQREKEAEERK----KKVGAVGMKFTAMAMANRT 195
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A1V9ZP44_9STRA (PH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZP44_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.510e-26 Identity = 80/199 (40.20%), Postives = 117/199 (58.79%), Query Frame = 1
Query: 88 LNCVRSWRERDRLRRHTE---FLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQK-------SVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 654
LNC+ + +R H E FLR+GG+FKR+ +TFG TG E+ ++L D VL W +S G K +EI++ +K V P+ G +S + S GD+LLEL+AE+ +R WV +LQ V E+V+ +A K S+K +KDQA +Q + KR E++Q + +AE RK + GM+YTA+AMANRS
Sbjct: 4 LNCLEQCQA---IREHDERLTFLREGGVFKRKKYTFGLHTGTEAIHLQLHEASDEVLLWTAESSGAKP---NEIEVGGIKAVLPQ-GPSSFQLLSMQGDVLLELDAESAELRTQWVTALQFVCEEVQKEQEANGTTKKAPVTPSSLKQMVKDQANKQAYWHKRQQELKQREAEAEERKKKV--GVAGMKYTAIAMANRS 193
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A1W0A206_9STRA (PH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A206_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.180e-25 Identity = 76/202 (37.62%), Postives = 117/202 (57.92%), Query Frame = 1
Query: 70 GPCSCLLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQK-------SVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 654
G +CL C ++ RE D FL++GG+F+R+ +TFG TG E+ ++L + D +L W +S G K +EI++ +K + P + ++S + GD+LLELEAE +R WV +LQ V E+V+ + QK S+K +KDQA +Q + KR E++ +K+AE RK + GM+YTA+AMANRS
Sbjct: 2 GNLNCLEQC-QATREHDA---RVTFLQEGGVFQRKKYTFGLHTGSEAIHLQLHQESDEILLWTTESGGTKP---NEIEVGGIKAILPHGNTGFQILSMQ-GDVLLELEAETAEMRTQWVTALQFVCEEVQKEQERNGTQKKAPVTPTSLKQMVKDQANKQAYWHKRQQELKAREKEAEERKKKI--GASGMKYTAIAMANRS 193
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A6G0XQB8_9STRA (PH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQB8_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.050e-25 Identity = 77/200 (38.50%), Postives = 116/200 (58.00%), Query Frame = 1
Query: 70 GPCSCLLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQK-----SVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 654
G +CL C ++ RE D +FL+ GG+F R+ +TFG T ES ++L D D +L W + D K +EI++ +K+V P +G + S G++LLELEAE +R WV +LQ + E+VR N + K S+K +K+QA +Q + KR E++Q +K+AE RK + T GM+YTA+AMANR+
Sbjct: 2 GNLNCLEQC-QAIREHDE---RAKFLQAGGVFSRKKYTFGLHTSTESIHLQLHADSDEILLWTSDKQPDDAKP-NEIEVGSIKSVLP-SGPTGFQIYSMQGEVLLELEAETAEMRSEWVTALQWICEEVRKNQEINGTAKHPVSSSLKQMVKEQANKQAYWMKRQQELKQLEKEAEERKKKV--GTVGMKYTAIAMANRT 193
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A024URR6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URR6_9STRA) HSP 1 Score: 109 bits (272), Expect = 6.250e-25 Identity = 77/204 (37.75%), Postives = 119/204 (58.33%), Query Frame = 1
Query: 70 GPCSCLLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQK-------SVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETG--GMQYTALAMANRS 654
G +C +C ++ RE D +FL+ GG+F R+ +TFG TG E+ ++L D D +L W + D K +EI++ D+K+V P +G + S GD+LLEL+AE+ +R WV +LQ + E+VR + QK S+K +KDQA +Q + KR E++Q + +AE RK K+ G GM++TA+AMANR+
Sbjct: 2 GNLNCFEHC-QAIREHDE---RAKFLQAGGVFTRKKYTFGLHTGTETIHLQLHADSDEILLWTSDKQADGAKP-NEIEVGDIKSVLP-SGPTGFQIYSMQGDVLLELDAESAELRSEWVTALQWICEEVRRTQELNGTQKKHPASASSLKQMVKDQANKQAYWMKRQTELKQRELEAEERK----KKVGNVGMKFTAMAMANRT 195
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Match: A0A3M6VC71_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VC71_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.740e-13 Identity = 66/194 (34.02%), Postives = 104/194 (53.61%), Query Frame = 1
Query: 88 LNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDVKTVEPKAGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMK------DQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 651
LNC+ + R + L +G FKR+ G TG E V+L D T+L W+ D K+ IDL+ +K+V+ G A ++S GD++L++EAE+G +RD+WV LQ + E + NP ++ ++ MK D+A++Q + AKRT E++Q ++ GM+YTALAM+NR
Sbjct: 5 LNCLAQCQTRQEGTQRLLILEKGAYFKRKKTILGLTTGTERVHVKLDKDGHTLL-WKLH---DSIKNVTTIDLHSIKSVQAH-GEAGFSVTSPNGDVVLDVEAESGELRDTWVTHLQMICE--KSNPSDE-TEEEMQSGMKLCKVVEDRAKKQVYWAKRTQELEQRXXXXXXXXKKFAGV--GMKYTALAMSNR 188 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1429.3327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1429.3327.1 >prot_Ecto-sp13_S_contig1429.3327.1 ID=prot_Ecto-sp13_S_contig1429.3327.1|Name=mRNA_Ecto-sp13_S_contig1429.3327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp MGDDYSGPCSCLLNCVRSWRERDRLRRHTEFLRQGGLFKRRTFTFGFGTGback to top mRNA from alignment at Ecto-sp13_S_contig1429:71..3131- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1429.3327.1 ID=mRNA_Ecto-sp13_S_contig1429.3327.1|Name=mRNA_Ecto-sp13_S_contig1429.3327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3061bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1429:71..3131- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1429:71..3131- >mRNA_Ecto-sp13_S_contig1429.3327.1 ID=mRNA_Ecto-sp13_S_contig1429.3327.1|Name=mRNA_Ecto-sp13_S_contig1429.3327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1429:71..3131- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |