prot_Ecto-sp13_S_contig14287.3326.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14287.3326.1
Unique Nameprot_Ecto-sp13_S_contig14287.3326.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: D7G8M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M4_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 2.580e-42
Identity = 76/79 (96.20%), Postives = 76/79 (96.20%), Query Frame = 0
Query:    1 MVAAEAAVGQKQLETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 79
            MVAAEAA GQKQLETLKFLT ETARATK AVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG
Sbjct:   61 MVAAEAAAGQKQLETLKFLTPETARATKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 139          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A6H5JSP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP9_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 5.700e-39
Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0
Query:    1 MVAAEAAVGQKQLETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 79
            MVAAEAAVGQKQLETLKFLT ETARATK AVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG
Sbjct:  144 MVAAEAAVGQKQLETLKFLTPETARATKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 222          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A836CQQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQQ3_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.430e-22
Identity = 55/79 (69.62%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 MVAAEAAVGQKQLETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 79
            MVAAE  V  K LE L+FLT ETA A +   GTPAYVYD ASLKANA  CL+FPNA+GLTVR+AMKS PN AVLQLF  
Sbjct:    1 MVAAEPEVETK-LEQLRFLTPETAEAVRSTYGTPAYVYDVASLKANARECLSFPNAFGLTVRFAMKSCPNAAVLQLFNS 78          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A8G0V6J3_9BACT (Diaminopimelate decarboxylase n=1 Tax=Ruficoccus sp. ZRK36 TaxID=2866311 RepID=A0A8G0V6J3_9BACT)

HSP 1 Score: 84.0 bits (206), Expect = 3.270e-17
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 0
Query:   13 LETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLF 77
            +ETLKFLT E AR      GTP YVYD ASLK +AEA LAFPNA+GLTVR+AMK+ PN A+L++F
Sbjct:    1 METLKFLTPELARQIAADYGTPVYVYDEASLKRHAEAALAFPNAFGLTVRFAMKASPNAAILRVF 65          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A7S4A701_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A701_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.670e-17
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 0
Query:   13 LETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 79
            LE L+FL+ +  R+ +   GTP YVYDAA+LKA AE  LAFPNAYGLTVRYAMK+ PN AVL+LF+ 
Sbjct:   56 LEKLRFLSNDDVRSVQQDFGTPTYVYDAATLKARAEEALAFPNAYGLTVRYAMKACPNGAVLKLFES 122          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A7S2SXD7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXD7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.850e-17
Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 0
Query:   13 LETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 79
            +ETLKFLT ++ARA +  VGTPAY Y   +LK NA A LAFP+AYGLT R+AMKS PN A+LQLF  
Sbjct:   59 VETLKFLTPDSARAVRETVGTPAYAYHLPTLKENAAAVLAFPHAYGLTPRFAMKSCPNAAILQLFSS 125          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A7S1XR44_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR44_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.000e-17
Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   13 LETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLF 77
            +ETL+FL  ETAR     VGTPAYVY  A L   A+  LAFPNAYGLT RYAMKS PN A+LQLF
Sbjct:   50 METLRFLNPETAREIAAKVGTPAYVYSEAELTTQAKTALAFPNAYGLTARYAMKSSPNAAILQLF 114          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A5J4Z8F2_PORPP (Diaminopimelate decarboxylase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8F2_PORPP)

HSP 1 Score: 83.2 bits (204), Expect = 7.200e-17
Identity = 48/75 (64.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    4 AEAAVGQKQLETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQ 78
            A A V Q+Q   L+FL AETA   +  VGTP YVYD  SL+A AEA L FPNA+GLTVRYAMK+ PN AVLQLF+
Sbjct:   51 ATAPVSQQQYA-LRFLDAETALQVQQKVGTPCYVYDMKSLRAQAEAMLKFPNAFGLTVRYAMKAAPNVAVLQLFK 124          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A7S0GTX5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GTX5_MICPS)

HSP 1 Score: 83.2 bits (204), Expect = 7.210e-17
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    6 AAVGQKQLETLKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQ 78
            AA G   +E+L+FL  E A+A + A GTPAYVYD A L+  AE  LAFPNA+GLTVRYAMK+ PN A+L++F+
Sbjct:   52 AAAGDAAVESLQFLKPEEAKAVRDAFGTPAYVYDLARLEEQAEKALAFPNAFGLTVRYAMKASPNAAILKVFR 124          
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Match: A0A2D7DJK1_9SPIO (Diaminopimelate decarboxylase n=1 Tax=Spirochaeta sp. TaxID=28185 RepID=A0A2D7DJK1_9SPIO)

HSP 1 Score: 81.6 bits (200), Expect = 2.260e-16
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   16 LKFLTAETARATKVAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 79
            ++FL  E AR      GTP YVYDAA+LKA AE  LAFPNAYGLTVRYAMK+ PN AVL+LF+ 
Sbjct:    1 MRFLNNEEARTVAQDFGTPTYVYDAATLKARAEEALAFPNAYGLTVRYAMKACPNGAVLKLFES 64          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14287.3326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8M4_ECTSI2.580e-4296.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSP9_9PHAE5.700e-3997.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CQQ3_9STRA2.430e-2269.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8G0V6J3_9BACT3.270e-1766.15Diaminopimelate decarboxylase n=1 Tax=Ruficoccus s... [more]
A0A7S4A701_9STRA3.670e-1764.18Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2SXD7_9STRA3.850e-1764.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XR44_9STRA6.000e-1766.15Hypothetical protein (Fragment) n=3 Tax=Phaeomonas... [more]
A0A5J4Z8F2_PORPP7.200e-1764.00Diaminopimelate decarboxylase n=1 Tax=Porphyridium... [more]
A0A7S0GTX5_MICPS7.210e-1758.90Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A2D7DJK1_9SPIO2.260e-1665.63Diaminopimelate decarboxylase n=1 Tax=Spirochaeta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029066PLP-binding barrelGENE3D3.20.20.10coord: 40..77
e-value: 7.1E-7
score: 30.2
IPR029066PLP-binding barrelSUPERFAMILY51419PLP-binding barrelcoord: 32..77
NoneNo IPR availablePANTHERPTHR43727:SF4DIAMINOPIMELATE DECARBOXYLASEcoord: 11..78
NoneNo IPR availablePANTHERPTHR43727FAMILY NOT NAMEDcoord: 11..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14287contigEcto-sp13_S_contig14287:1550..2762 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14287.3326.1mRNA_Ecto-sp13_S_contig14287.3326.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14287 1433..3137 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14287.3326.1 ID=prot_Ecto-sp13_S_contig14287.3326.1|Name=mRNA_Ecto-sp13_S_contig14287.3326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
MVAAEAAVGQKQLETLKFLTAETARATKVAVGTPAYVYDAASLKANAEAC
LAFPNAYGLTVRYAMKSLPNKAVLQLFQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029066PLP-binding_barrel