mRNA_Ecto-sp13_S_contig14282.3324.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14282.3324.1
Unique NamemRNA_Ecto-sp13_S_contig14282.3324.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE)

HSP 1 Score: 565 bits (1456), Expect = 1.950e-197
Identity = 295/355 (83.10%), Postives = 297/355 (83.66%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAEDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVE-------------------------------------------IDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 900
            TILGWLRDFRGHGGFK DSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAEDESVYKAYA EGK+WVVQGVRG+RKKTEGPGEMVS FQDERHGFGLPLTDD            GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVE                                           IDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD
Sbjct:  132 TILGWLRDFRGHGGFKLDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAEDESVYKAYAHEGKKWVVQGVRGIRKKTEGPGEMVSGFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 486          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE)

HSP 1 Score: 494 bits (1272), Expect = 1.340e-167
Identity = 265/386 (68.65%), Postives = 266/386 (68.91%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAE--------------------------------------------------------------------------DESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 900
            TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMR QKRLT KDV                        NLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAE                                                                          DESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD            GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQ+        VFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD
Sbjct:  401 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTAKDV------------------------NLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQMEDALDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 762          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5JUX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX8_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 1.630e-167
Identity = 260/312 (83.33%), Postives = 263/312 (84.29%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAEDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 900
            TILGWLRD RGHGGFKRDSRGVHE DWIMSEEDLKDELIKWMR QKRLTV                           NLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTL PEELQRLDGIKG  +    +DES+YKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD            GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD
Sbjct:  328 TILGWLRDLRGHGGFKRDSRGVHEWDWIMSEEDLKDELIKWMRTQKRLTV---------------------------NLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLLPEELQRLDGIKGKVRHI-GQDESLYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 611          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5KP29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP29_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 4.390e-161
Identity = 224/254 (88.19%), Postives = 233/254 (91.73%), Query Frame = 1
Query:   16 LRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAEDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQ 741
            L DFRGHGGFKRDSRGVH RDWIMSEEDLKDELIKWMR QKRLTVKDVQNYINQWLFA+EIGDLS LLSYQVNLPVSM+TTHSWMIALGCKYE+ATKSFYTDGHE+K VVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA+DFCAEDESVYK YAREGKEWV+QGVRG+RK+ EGPGEMVSAFQDERHGFGLPLTDD            GKE LTRSP LRFLQ+GKNKDGYWGYDEFKEQ
Sbjct:   49 LWDFRGHGGFKRDSRGVHRRDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFASEIGDLSTLLSYQVNLPVSMSTTHSWMIALGCKYEQATKSFYTDGHEEKVVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEDFCAEDESVYKVYAREGKEWVLQGVRGIRKRNEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEDLTRSPDLRFLQHGKNKDGYWGYDEFKEQ 302          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 2.950e-157
Identity = 261/336 (77.68%), Postives = 266/336 (79.17%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKL---------------ALRQPLWVRVQRDTLTPEELQRL--DGIKGPAK-------DFCAEDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 900
            TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKD+LIKWMR QKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGK   V R                 ALR  L       ++  EE   L  +    PAK           +DESVYKAYAREGKEWVVQGV GL KKTEGPGEMVSAFQDERHGFGLPLTDD            GKEVLTRSPGL FLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVK GGKQ VLRD
Sbjct:  321 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDQLIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKGARVHRVPRRSPAGDNGSVDRFDALRAELGPEGGHYSVRFEEAAALPCEHFHTPAKCKGNKEVRHIGQDESVYKAYAREGKEWVVQGVPGLWKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLWFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKNGGKQTVLRD 656          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE)

HSP 1 Score: 467 bits (1202), Expect = 1.450e-154
Identity = 260/371 (70.08%), Postives = 263/371 (70.89%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAE--------------------------------------------------------------------------DESVYKAYAREGKEWVVQG-------------------VRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVV 798
            TILGWLRDFRGHGGFKRDSRGVHERDWIMSEED KDELIKWMR QKRLTVKDVQNYINQWLFAN+IGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLAL QPLWVRVQRDTLTP+ELQRLDGIKGPA+DFCAE                                                                          DESVYKAYAREGKEWVVQG                   VRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD            GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVV
Sbjct:  387 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDPKDELIKWMRTQKRLTVKDVQNYINQWLFANQIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQPLWVRVQRDTLTPKELQRLDGIKGPAEDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGXXXXXXXXXXXXXXXXXXXVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVV 757          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 6.440e-141
Identity = 268/493 (54.36%), Postives = 269/493 (54.56%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSG 819
            TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMR QKRLTVKDVQNYINQWLFA EIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPL VRVQR TLTPEELQRLDGIKGPA+DFCAE                                                                                                                                                                                                                DESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD            GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSG
Sbjct:  210 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFAYEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLRVRVQRYTLTPEELQRLDGIKGPAEDFCAEVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEEFGAERGASASSSTSISCGTTAPSIDSTISVLNLXXXXXXXXXXXXXXXAEVYDCVVEGRECIEFHVDLLRDIGSVDRFDARRAKLGPEGGHYSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSG 702          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 8.020e-139
Identity = 249/445 (55.96%), Postives = 265/445 (59.55%), Query Frame = 1
Query:    4 ILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTV----------------------------------KDVQNYINQWL--------------------------------------FANEI-GDLSRLLSYQ------------------------VNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAE---------------------DESV----------------YKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDD------------GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD 900
            I   LRDFRGHGG +RDSRGVHERDWI SEEDLKDELIKWMR Q+RLTV                                  KDV  Y  +++                                      F  E  G+ SR+  +                         VNLPVSMATTHSWMI  GCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA++F AE                     ++SV                + AYAREGKEWVVQGVRGLRKKTEGPGEMV AFQDERHGFGLPLTDD            GKEVLT+ P LRFLQY KN+DGY GYDEFKEQI        VFEPDMQVVVEIDHSSGHTR+REDGLHVGNMNVKYGGKQKVLRD
Sbjct:  117 IAARLRDFRGHGGSERDSRGVHERDWITSEEDLKDELIKWMRTQERLTVNLPVSMATTHSWMIVPGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEEFGAEXPGEPSRVHGHNPLLDDRAGVQVRAGYEVFLHGRPXVNLPVSMATTHSWMIVPGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEEFGAEVYDCVVEGRESIEFHVDLVRDNDSVDRFDALRAELGPEGGHFSAYAREGKEWVVQGVRGLRKKTEGPGEMVPAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTQRPDLRFLQYWKNRDGYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRD 561          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5JI16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI16_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 2.600e-137
Identity = 226/313 (72.20%), Postives = 237/313 (75.72%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKDFCAEDESVYKAYAREGKEWVVQGVRGLRKKTE-----------GP--GEMVSAFQD-----------------ERHGFGLPLTDDGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLH 849
            T+LGWLRDFRGHGGFKRDSR VHERDWIMS+EDLKDELIKWMR QKRLTVKDVQNYINQWLFANEIGDLSRLLS+QVNLPVSM TTHSW+IALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA+DFCAE   VY     EG+E +   V  LR               GP  G     F++                  R        + GKE LT SPGLRFLQYGKNKDGYWGY+E KEQI  XXXXXXVFEPDMQVVVEIDHSSGHTR    G H
Sbjct:  230 TVLGWLRDFRGHGGFKRDSRRVHERDWIMSKEDLKDELIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSHQVNLPVSMVTTHSWIIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEDFCAE---VYDCVV-EGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKAVNARRKEKGKEDLTPSPGLRFLQYGKNKDGYWGYNELKEQIEDXXXXXXVFEPDMQVVVEIDHSSGHTRWIACGEH 538          
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 3.560e-125
Identity = 216/424 (50.94%), Postives = 247/424 (58.25%), Query Frame = 1
Query:    1 TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAKDFCAE--------------------------------------------------------------------------DESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTD--------------DGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSG----------------------------------HTRQREDGLHVGNMNVKYGGKQKVLRD 900
            TIL WLRDFR  GGF+RD+RG HE DWIMSEEDLK  L+ WM  Q R T+KDV  YIN  L  ++  DLSRL +YQVNLPVSM+TTHSWMI LGC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ALRQPLWVRVQR  L  EE+ RLD +K  GP  DF AE                                                                          DES YKAYAREGKEWV++GVRGLRK+TEGPGEMVS FQDERHGFGLP++D              +GK+ LTRSPGLRFL+YGK KDG WGYD+F+EQ+          +PD Q+V E+DHSSG                                  H +QREDGLHV NMNVKYGGKQKVLRD
Sbjct:  318 TILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEYFHPTNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKRTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGCWGYDQFEEQVEDVMDVLEHIDPDKQIVFEVDHSSGPDAKPWTPVXXXXXXXXXXXXXXXXXXXXXXXXXHGKQREDGLHVSNMNVKYGGKQKVLRD 741          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14282.3324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRV8_9PHAE1.950e-19783.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2T4_9PHAE1.340e-16768.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX8_9PHAE1.630e-16783.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP29_9PHAE4.390e-16188.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN6_9PHAE2.950e-15777.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7P7_9PHAE1.450e-15470.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J4M4_9PHAE6.440e-14154.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5X3_9PHAE8.020e-13955.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI16_9PHAE2.600e-13772.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L611_9PHAE3.560e-12550.94Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14282contigEcto-sp13_S_contig14282:1419..2576 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeFungi
Stop0
Start0
Seed ortholog score95.5
Seed ortholog evalue4.5e-17
Seed eggNOG ortholog936053.I1CPP0
Model size900
Hectar predicted targeting categoryother localisation
Exons3
EggNOG OGs1GXKU@112252,29JY0@1,2RT6R@2759,39VBJ@33154,3P12S@4751
Cds size900
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462763.6966949-CDS-Ecto-sp13_S_contig14282:1418..16731681462763.6966949-CDS-Ecto-sp13_S_contig14282:1418..1673Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14282 1419..1673 -
1681462763.7071888-CDS-Ecto-sp13_S_contig14282:1709..18621681462763.7071888-CDS-Ecto-sp13_S_contig14282:1709..1862Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14282 1710..1862 -
1681462763.7164154-CDS-Ecto-sp13_S_contig14282:2084..25761681462763.7164154-CDS-Ecto-sp13_S_contig14282:2084..2576Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14282 2085..2576 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14282.3324.1prot_Ecto-sp13_S_contig14282.3324.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14282 1419..2576 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14282.3324.1

>prot_Ecto-sp13_S_contig14282.3324.1 ID=prot_Ecto-sp13_S_contig14282.3324.1|Name=mRNA_Ecto-sp13_S_contig14282.3324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
TILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTV
KDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERA
TKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQR
LDGIKGPAKDFCAEDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSA
FQDERHGFGLPLTDDGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIED
VLDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRD
back to top

mRNA from alignment at Ecto-sp13_S_contig14282:1419..2576-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14282.3324.1 ID=mRNA_Ecto-sp13_S_contig14282.3324.1|Name=mRNA_Ecto-sp13_S_contig14282.3324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1158bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14282:1419..2576- (Ectocarpus species13 EcNAP12_S_4_19m)
ACAATCCTGGGGTGGCTCAGGGACTTTCGGGGGCACGGTGGTTTCAAGCG AGATTCAAGGGGGGTGCACGAGAGGGACTGGATCATGTCGGAAGAGGACC TCAAGGATGAGCTCATCAAGTGGATGAGGAGACAGAAGCGCCTTACGGTC AAGGACGTCCAGAACTACATCAACCAGTGGCTGTTCGCAAACGAGATCGG GGATTTATCCAGACTCCTTTCGTACCAAGTGAACCTTCCCGTTTCCATGG CCACAACCCACTCCTGGATGATCGCGCTGGGGTGCAAGTACGAGCGGGCT ACGAAGTCTTTCTACACGGACGGCCACGAGAAGAAGGACGTGGTGGTGTA CCGCGGCAAGTACATCGATGTCAAGCGGAAGCTCGCCCTTCGGCAACCGT TGTGGGTGCGAGTTCAACGAGACACTCTGACGCCGGAGGAGCTTCAGCGG CTTGACGGCATCAAAGGTCCGGCAAAGGATTTCTGCGCAGAAGTTTACGA TTGCGTGGTAGAGGGGCGCGAGTGCATCGAGTTCCACGTCGATCTCCTGC GGGACAACGGCTCCGTCGATCGATTCGACGCTCTCCGTGCTGAACTTGGA CCGGAAGGGGGGCACTTCAGCGTCCGCTTCGAAGAAGGTGCTGCTCTTCC ATGCGAGCATTTTCACACCCCGGCCAAGTGCAAATGCAACAGGAAGGTGC GCCACATCGGACAGGACGAGAGTGTCTACAAGGCGTATGCGCGCGAGGGC AAGGAGTGGGTTGTCCAAGGGGTACGCGGGTTACGTAAAAAAACCGAGGG CCCGGGAGAGATGGTGTCTGCCTTTCAAGATGAGAGGCACGGCTTTGGCT TGCCGTTGACGGACGACGTGCTGCAAGCGGTGAACGCGCGTCGCAAGGAG AAGGGCAAGGAAGTCCTGACACGAAGCCCTGGCCTGCGATTTCTCCAGTA CGGGAAGAACAAGGATGGATACTGGGGATACGACGAGTTCAAGGAACAGA TCGAGGACGTCTTGGACGTCTTGGACGTCTTCGAACCCGACATGCAAGTG GTGGTTGAGATCGACCACTCGTCGGGGCACACAAGGCAGCGGGAGGATGG ATTGCATGTGGGGAACATGAATGTCAAGTACGGGGGGAAGCAAAAGGTGT TGCGGGAT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14282:1419..2576-

>mRNA_Ecto-sp13_S_contig14282.3324.1 ID=mRNA_Ecto-sp13_S_contig14282.3324.1|Name=mRNA_Ecto-sp13_S_contig14282.3324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14282:1419..2576- (Ectocarpus species13 EcNAP12_S_4_19m)
ACAATCCTGGGGTGGCTCAGGGACTTTCGGGGGCACGGTGGTTTCAAGCG
AGATTCAAGGGGGGTGCACGAGAGGGACTGGATCATGTCGGAAGAGGACC
TCAAGGATGAGCTCATCAAGTGGATGAGGAGACAGAAGCGCCTTACGGTC
AAGGACGTCCAGAACTACATCAACCAGTGGCTGTTCGCAAACGAGATCGG
GGATTTATCCAGACTCCTTTCGTACCAAGTGAACCTTCCCGTTTCCATGG
CCACAACCCACTCCTGGATGATCGCGCTGGGGTGCAAGTACGAGCGGGCT
ACGAAGTCTTTCTACACGGACGGCCACGAGAAGAAGGACGTGGTGGTGTA
CCGCGGCAAGTACATCGATGTCAAGCGGAAGCTCGCCCTTCGGCAACCGT
TGTGGGTGCGAGTTCAACGAGACACTCTGACGCCGGAGGAGCTTCAGCGG
CTTGACGGCATCAAAGGTCCGGCAAAGGATTTCTGCGCAGAAGACGAGAG
TGTCTACAAGGCGTATGCGCGCGAGGGCAAGGAGTGGGTTGTCCAAGGGG
TACGCGGGTTACGTAAAAAAACCGAGGGCCCGGGAGAGATGGTGTCTGCC
TTTCAAGATGAGAGGCACGGCTTTGGCTTGCCGTTGACGGACGACGGCAA
GGAAGTCCTGACACGAAGCCCTGGCCTGCGATTTCTCCAGTACGGGAAGA
ACAAGGATGGATACTGGGGATACGACGAGTTCAAGGAACAGATCGAGGAC
GTCTTGGACGTCTTGGACGTCTTCGAACCCGACATGCAAGTGGTGGTTGA
GATCGACCACTCGTCGGGGCACACAAGGCAGCGGGAGGATGGATTGCATG
TGGGGAACATGAATGTCAAGTACGGGGGGAAGCAAAAGGTGTTGCGGGAT
back to top