prot_Ecto-sp13_S_contig14275.3319.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14275.3319.1
Unique Nameprot_Ecto-sp13_S_contig14275.3319.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length470
Homology
BLAST of mRNA_Ecto-sp13_S_contig14275.3319.1 vs. uniprot
Match: A0A6H5KL36_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL36_9PHAE)

HSP 1 Score: 636 bits (1640), Expect = 4.460e-205
Identity = 385/475 (81.05%), Postives = 398/475 (83.79%), Query Frame = 0
Query:    1 GGGDSLPATLSAAMTATSIVVEHVSKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRMSLGEGGEDAGSAKSISPGATAAAGARFNRRKMCWE----GFEEPDLTGFDTTDSESESLPRAPGSSRXXXXXXXPSLSPPRKGGGSRASMTVDERVKSEERGPASSSTLLQGLDVTAAASGAADDAASTGGGEGDALRPSGDGGGGLEIDDGKASPGEGEGTADVVVGSEEGDGGRHGEERGSDSPSAAAAVAPMQASADAAGERRGSTAASEVMVSPVPLAAEPAGLGRMRLGGVDEGEEGNGSSRGGGNAGRELPLSLSDSRHSGGDFSDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAMLMAPTALKGPDEGVDAVAGEPIGGGKVGCLRRPSFGPVLFTPAGLAEQAMATMISCREDTTAPPPAAGAPGLSPPSAT--------EPPSRHASPR 463
            GGGDSLPATLSAAMTATSI V+HVSKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDR+SLGEGGEDAG AKSISPGATAAAGARFNR+KMCWE    GFEEPDLTGFDTTDSESESLPRAP SSR  XXXXXPSLSPPRKGG SRASMTVDERV+SEERGPAS+   LQGLDV AAASG                        GLEIDD K  PGE  G   VV GSE+GDGGR G+E GSDSPS AA   P+QA A AAG RRGS+AASEVM+SPVP AAEPAGLG MRLGGVDE E+G+GSSRGGGNAGRE PLSLSDSRHSGGDFSDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAML+AP ALKG DEGVDAV GEPIGGGKVGCLRRPSFGPVLFTPAGLAEQAMATMISC EDTTAP PAAG PGLSPPS          EP SRHASPR
Sbjct:  958 GGGDSLPATLSAAMTATSIAVKHVSKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRVSLGEGGEDAGCAKSISPGATAAAGARFNRQKMCWEASTTGFEEPDLTGFDTTDSESESLPRAPRSSRSRXXXXXPSLSPPRKGG-SRASMTVDERVESEERGPASARASLQGLDV-AAASGXXXXXXXXXXXXXXXXXXXXXXXXGLEIDDEKDWPGEDGGATSVVEGSEQGDGGRRGKEWGSDSPSRAAV--PVQALAGAAGARRGSSAASEVMMSPVPPAAEPAGLGPMRLGGVDEEEKGDGSSRGGGNAGREPPLSLSDSRHSGGDFSDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAMLIAPKALKGTDEGVDAVTGEPIGGGKVGCLRRPSFGPVLFTPAGLAEQAMATMISCPEDTTAPLPAAGTPGLSPPSXXXXXXXXXXEPSSRHASPR 1428          
BLAST of mRNA_Ecto-sp13_S_contig14275.3319.1 vs. uniprot
Match: D7FZY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY2_ECTSI)

HSP 1 Score: 632 bits (1631), Expect = 1.490e-203
Identity = 373/459 (81.26%), Postives = 384/459 (83.66%), Query Frame = 0
Query:    1 GGGDSLPATLSAAMTATSIVVEHVSKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRMSLGEGGEDAGSAKSISPGATAAAGARFNRRKMCWEGFEEPDLTGFDTTDSESESLPRAPGSSRXXXXXXXPSLSPPRKGGGSRASMTVDERVKSEERGPASSSTLLQGLDVTAAASGAADDA-ASTGGGEGDALRPSGDGGGGLEIDDGKASPGEGEGTADVVVGSEEGDGGRHGEERGSDSPSAAAAVAP-------MQASADAAGERRGSTAASEVMVSPVPLAAEPAGLGRMRLGGVDEGEEGNGSSRGGGNAGRELPLSLSDSRHSGGDFSDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAMLMAPTALKGPDEGVDAVAGEPIGGGKVGCLRRPSFGPVLFTPAGLAEQAMATMISCREDTTAPPPAAGAPGLSPPS 451
            GGGDSLPATLSAAMTATSI VEHV KRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRMSLG GGEDAGSAKSISPG+TAAAGARFNRRKMCWEGFEEPDLTGFDTTDSESESLPRAPGSSR  XXXX P LSPPRKGG SRASMTV+ERV SEERGPASSS  LQGLD+ AAASG ADDA A+TGGG+ D LRPSGDGGGGLEIDD KASPGE                                           +QA A AAGERRGS+ ASEVMVSPVP AAEPAGLG MR+GG DE E+G+GSSRG GNAGRE PLSLSDSRHSGGD SDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAMLMAP ALKGPDEG+DAVAGEPIGGGK GCL RPSFGPVLFTPAGLAEQAMATMISC EDTTA PPAAGAPGLSPPS
Sbjct: 1094 GGGDSLPATLSAAMTATSIAVEHVRKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRMSLGAGGEDAGSAKSISPGSTAAAGARFNRRKMCWEGFEEPDLTGFDTTDSESESLPRAPGSSRSRXXXXSPPLSPPRKGG-SRASMTVEERVDSEERGPASSSASLQGLDLAAAASGTADDAVATTGGGDCDTLRPSGDGGGGLEIDDEKASPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQALAGAAGERRGSSVASEVMVSPVPAAAEPAGLGPMRIGGADEEEKGDGSSRGSGNAGREAPLSLSDSRHSGGDLSDDVSDWDRSLRSLTSPPPGSPDLLVEGAPDPSQVPLMRRLSTAMLMAPKALKGPDEGLDAVAGEPIGGGKAGCLIRPSFGPVLFTPAGLAEQAMATMISCPEDTTASPPAAGAPGLSPPS 1551          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14275.3319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL36_9PHAE4.460e-20581.05Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZY2_ECTSI1.490e-20381.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14275contigEcto-sp13_S_contig14275:1986..4456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14275.3319.1mRNA_Ecto-sp13_S_contig14275.3319.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14275 1986..4456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14275.3319.1 ID=prot_Ecto-sp13_S_contig14275.3319.1|Name=mRNA_Ecto-sp13_S_contig14275.3319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp
GGGDSLPATLSAAMTATSIVVEHVSKRTRERLLLEKGAGAGKRLSGPVQI
TLEDLQTSPSPDRMSLGEGGEDAGSAKSISPGATAAAGARFNRRKMCWEG
FEEPDLTGFDTTDSESESLPRAPGSSRSRSRSRSPSLSPPRKGGGSRASM
TVDERVKSEERGPASSSTLLQGLDVTAAASGAADDAASTGGGEGDALRPS
GDGGGGLEIDDGKASPGEGEGTADVVVGSEEGDGGRHGEERGSDSPSAAA
AVAPMQASADAAGERRGSTAASEVMVSPVPLAAEPAGLGRMRLGGVDEGE
EGNGSSRGGGNAGRELPLSLSDSRHSGGDFSDDVSDWDRSLRSLTSPPPG
SPDLLVEGAPDPSQVPLMRRLSTAMLMAPTALKGPDEGVDAVAGEPIGGG
KVGCLRRPSFGPVLFTPAGLAEQAMATMISCREDTTAPPPAAGAPGLSPP
SATEPPSRHASPRAAAQATE
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