mRNA_Ecto-sp13_S_contig14270.3317.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: D7G843_ECTSI (Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G843_ECTSI) HSP 1 Score: 384 bits (986), Expect = 1.270e-126 Identity = 203/207 (98.07%), Postives = 206/207 (99.52%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAPVANGAEGDEEGGVADAEVVG 621
YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQST+TQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAP A+GAEG+EEGGVADAEVVG
Sbjct: 576 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTDTQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAPDASGAEGEEEGGVADAEVVG 782
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: G3G5X7_9PHAE (Heat shock protein 90 family (Fragment) n=23 Tax=Fucaceae TaxID=3010 RepID=G3G5X7_9PHAE) HSP 1 Score: 230 bits (586), Expect = 2.410e-74 Identity = 121/152 (79.61%), Postives = 136/152 (89.47%), Query Frame = 1
Query: 70 KPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQR 525
KPLTDLGKENV+ D+ +KAKKEEQS++T FRQWLQE LGEKRVQKVEVS RLV SAATLVQSSYGMSPTMARYM+AQAVAFGE+DS+MTG Q AIMEIN +HPVVK+L+ ++ TDPDA +TKQTA LLYDIAALTGGY+IDDPNAFAQR
Sbjct: 1 KPLTDLGKENVDLGTDDSDKAKKEEQSSDTAGFRQWLQEQLGEKRVQKVEVSQRLVDSAATLVQSSYGMSPTMARYMRAQAVAFGEKDSTMTGMQSAIMEINADHPVVKALKMNYETDPDADATKQTAFLLYDIAALTGGYTIDDPNAFAQR 152
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A835ZF40_9STRA (Heat shock protein 90 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF40_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.730e-52 Identity = 104/181 (57.46%), Postives = 131/181 (72.38%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQ-QQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGML 540
Y+VLFMTEPLDEL Q+I + GK L DL KEN + EEEK +K +S ET++FR+WL++ + K VQKVEVS RLV S ATLVQS+YGMSPTM RYMKAQAVA GE+ G QA++EIN HP++K L+ F PD A TK A+L+YD+AALTGGYSI++ +FA RVT ++
Sbjct: 492 YEVLFMTEPLDELCAQAIERFDGKELIDLSKENADLGDAEEEKREKAIKSEETEEFREWLKKAVDSK-VQKVEVSTRLVDSPATLVQSAYGMSPTMQRYMKAQAVAMGEEGGMFGGGLNQAVLEINLTHPIIKRLETRFRESPDTADTKALALLIYDVAALTGGYSIENAASFAARVTALM 671
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A1Q9EC13_SYMMI (HSP90-5 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EC13_SYMMI) HSP 1 Score: 166 bits (420), Expect = 8.120e-44 Identity = 98/208 (47.12%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQ-QAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAPVANGAEGDEEGGVADAEVVG 621
Y+VL+M +PLDE+ QSI +Y GK L D+ K ++ E+EK + EE + E +D WL++ LGE RVQKV++S+RLV S ATLVQ +GMSP M RYMK+Q + + G + QAI+EINP H VVK+L+ ++ T PD+ T+ +++Y+ AAL GGY+I+DP FA+RVT ++E + AEG E G DAEVVG
Sbjct: 1406 YEVLYMVDPLDEICSQSIVDYDGKKLVDINKAGLDLEKSEDEKKEMEETTKEFEDLATWLKKQLGE-RVQKVQISDRLVESPATLVQGEWGMSPMMQRYMKSQTTSSASDSAFAIGSRNQAILEINPSHNVVKALKNAYETKPDSVETEDMVMMIYETAALIGGYTIEDPGDFARRVTKLMELQ--------AEG-EGAGTQDAEVVG 1603
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A7S2SVX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVX7_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.590e-42 Identity = 91/184 (49.46%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKE--NVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDS--SMTGQQQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGML 540
Y+VL+MTEPLDELTV+++ + GK L + K N+ + E K KKEE S + +WL++ L + VQKVEVS RL S A LVQ +YGMSPTM RYMKAQAVA GE + QA +EINP+HP+V L+ P++ STK A L+YD+AAL GYSI+DP+ FA R+T ++
Sbjct: 523 YEVLYMTEPLDELTVEALSSFDGKTLVNAAKGDLNIPEESEPEMKTKKEEASKNLAELCEWLEKELKSRDVQKVEVSMRLTDSPAALVQGAYGMSPTMQRYMKAQAVAAGEMEGLGGFGNLNQATLEINPDHPIVSKLKTMVDIAPESGSTKSYATLMYDVAALASGYSIEDPSDFATRITELM 706
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A7S3YA46_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YA46_9EUKA) HSP 1 Score: 151 bits (381), Expect = 3.480e-42 Identity = 91/214 (42.52%), Postives = 132/214 (61.68%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAPVANG------AEGDEEGG--VADAEVV 618
Y+VL++T+P+DE QS+ + K L D KE+V+ +EEK ++EE + + WL+ LL V+ V++SNRL S A LVQ +GMSPTM R+M+AQA G D SM + + +EINP HP++K+L A F D + + A LLYD+AA+ GGY+I+DPNA A R+ +++ APV N ++GD++ G V DAEVV
Sbjct: 27 YEVLYLTDPVDEFVFQSLRTFDEKELVDASKESVDVGATDEEKKQQEEMKKDYEQLTSWLKNLLS-SNVEAVQISNRLTESPAVLVQGQFGMSPTMERFMRAQASTTGR-DFSM--RMKPTLEINPTHPIIKTLDAKFREDKHNKNNQDYAKLLYDVAAMAGGYNIEDPNALASRIMSLMDS---APVDNAKKDVTESKGDDDDGPEVVDAEVV 233
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A813BYU4_9DINO (RNA helicase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813BYU4_9DINO) HSP 1 Score: 161 bits (407), Expect = 4.750e-42 Identity = 87/182 (47.80%), Postives = 125/182 (68.68%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQ-QAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLE 543
Y+VL+M +PLDE+ QSI +Y GK L D+ K ++ E+EK + EE + E +D WL++ LGE RVQKV++S+RLV S ATLVQ +GMSP M RYMK+Q + + G + QAI+EINP H VVK+L+ ++ T PD+ T+ +++Y+ AAL GGY+I+DP FA+RVT ++E
Sbjct: 464 YEVLYMVDPLDEICSQSIVDYDGKKLVDINKAGLDLEKSEDEKKEMEETTKEFEDLATWLKKQLGE-RVQKVQISDRLVESPATLVQGEWGMSPMMQRYMKSQTTSSASDSAFAIGSRNQAILEINPSHNVVKALKNAYETKPDSVETEDMVMMIYETAALIGGYTIEDPGDFARRVTKLME 644
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A4D9D6M5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6M5_9STRA) HSP 1 Score: 160 bits (404), Expect = 7.610e-42 Identity = 91/196 (46.43%), Postives = 129/196 (65.82%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQ--QAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAPVANGAEG 582
Y+V+ + +PLDE+ +QS+G+Y K + D KE + +EEKA EE+ ETQ R W ++LLG KRV KVEV+NRLV S A LVQS+YGMSP M +Y +AQ+V GE D S Q QAI+E+NP HP+V SL+ + P+A T + L+YD+AA+ GGY ++DP AF R+T ++ ++ + +G EG
Sbjct: 554 YEVVILQDPLDEMAMQSLGKYADKDIVDAAKEQQAET--DEEKAFLEEKGQETQALRDWYRKLLG-KRVTKVEVTNRLVDSPAALVQSAYGMSPQMQKYYRAQSVMQGEDDGSGLDSQFNQAILELNPTHPIVVSLREKVSVSPEALETMELGRLVYDVAAVAGGYDVEDPGAFTARITKLMSRQV---LVDGGEG 743
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A812VL78_SYMPI (HspD protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VL78_SYMPI) HSP 1 Score: 159 bits (403), Expect = 8.310e-42 Identity = 97/207 (46.86%), Postives = 133/207 (64.25%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMTGQQ-QAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAPVANGAEGDEEGGVADAEVV 618
Y+VL+M +PLDE+ QSI +Y GK L D+ K ++ E+EK + EE + E + WL++ LGE RVQKV++S+RLV S ATLVQ +GMSP M RYMK+Q + + G + QAI+EINP H VVK+L+ + T PDA T+ ++LY+ AAL GGY+I+DP FA+RVT ++E + A GA G DAEVV
Sbjct: 548 YEVLYMVDPLDEICSQSIVDYEGKKLVDINKAGLDLDKSEDEKKEMEETTKEFEALATWLKKQLGE-RVQKVQISDRLVESPATLVQGEWGMSPMMQRYMKSQTTSSASDSAFAIGSRNQAILEINPSHNVVKALKNNMETKPDAVETEDMVMMLYETAALIGGYTIEDPGDFAKRVTKLMEMQ-----AEGAGA----GTQDAEVV 744
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Match: A0A7S4D4B0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4B0_HETAK) HSP 1 Score: 159 bits (402), Expect = 1.260e-41 Identity = 95/208 (45.67%), Postives = 133/208 (63.94%), Query Frame = 1
Query: 1 YDVLFMTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGD--EEEKAKKEEQSTETQDFRQWLQELLGEKRVQKVEVSNRLVGSAATLVQSSYGMSPTMARYMKAQAVAFGEQDSSMT-GQQQAIMEINPEHPVVKSLQASFTTDPDAASTKQTAVLLYDIAALTGGYSIDDPNAFAQRVTGMLEDRIGAPVANGAEGDEEGGVADAEV 615
Y+V++ EP+DEL +Q++ ++G L D+GKE+V+ GD EEEKAK EE + + +WL +L EK+V+ V++S +L S A L Q++YGMSP+M RYMKAQAVA G ++ + G +A++E+NP HPVV SL+ PD+ T+ A L+YD+AALTGGY +D P FA RVT M+ G V A G V DA V
Sbjct: 537 YEVIYACEPIDELALQNLNKFGELELLDIGKEDVDL-GDVGEEEKAKIEEAEKDFEATMEWLGKLF-EKKVKSVKLSTKLTESPAALTQAAYGMSPSMQRYMKAQAVAQGMDEAMFSMGTDKAVLELNPAHPVVLSLRERVAAAPDSPDTESLARLMYDVAALTGGYELDSPKRFADRVTAMMSQMAGVDVPAPAAAGGGGAVQDAVV 742 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14270.3317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14270.3317.1 >prot_Ecto-sp13_S_contig14270.3317.1 ID=prot_Ecto-sp13_S_contig14270.3317.1|Name=mRNA_Ecto-sp13_S_contig14270.3317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp MTEPLDELTVQSIGEYGGKPLTDLGKENVEFSGDEEEKAKKEEQSTETQDback to top mRNA from alignment at Ecto-sp13_S_contig14270:462..2267+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14270.3317.1 ID=mRNA_Ecto-sp13_S_contig14270.3317.1|Name=mRNA_Ecto-sp13_S_contig14270.3317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14270:462..2267+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14270:462..2267+ >mRNA_Ecto-sp13_S_contig14270.3317.1 ID=mRNA_Ecto-sp13_S_contig14270.3317.1|Name=mRNA_Ecto-sp13_S_contig14270.3317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14270:462..2267+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |