mRNA_Ecto-sp13_S_contig1427.3315.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1427.3315.1
Unique NamemRNA_Ecto-sp13_S_contig1427.3315.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: D8LLP6_ECTSI (Glutamine cyclotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP6_ECTSI)

HSP 1 Score: 749 bits (1935), Expect = 3.340e-264
Identity = 405/438 (92.47%), Postives = 416/438 (94.98%), Query Frame = 1
Query:    1 MSTRALRRSIGRKDKERKGSGPRGTSTPQLPVRSNSKGGILARTVSKLFQPSASDMDADTSTRNALAGIRKRKAGGGGWRRMPRAGIVVLSSALCAALLWAGVGSLSQPPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPSARKDDSQETASRNLSRRPELKTRGGQLAFARFSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKLNDGKADDDGEAGPVSSEGNERRRRQ 1314
            MSTRALRRSIGRKDKERKGSGPRGTS PQLPVRSNS+GGILA TVSKLFQPSASDMDADTSTRNALAGIR+RKAGG GWRRMPRAGIVV  SALCAALLWAGVGSL+QPPAAAG         XXXXXXXXXXXXXXXXXXXXXXXAG SAR+D SQETASRNLSRRPELKTRGGQLAFARFSLLAEYPHDQHAFTQGLC++GGFLYESTGLYGGKSTVRKVDTETGKVLQSVKL DKYFGEGMVI D KIHSLTWRSKVGFSWDLETFE QEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATM+ETRRV+VKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKLND KADDD +AGPVSS+G+ERRRRQ
Sbjct:    1 MSTRALRRSIGRKDKERKGSGPRGTSRPQLPVRSNSRGGILASTVSKLFQPSASDMDADTSTRNALAGIRRRKAGGEGWRRMPRAGIVVFFSALCAALLWAGVGSLAQPPAAAGGARANSTRGXXXXXXXXXXXXXXXXXXXXXXXAGTSARQDGSQETASRNLSRRPELKTRGGQLAFARFSLLAEYPHDQHAFTQGLCYNGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLDDKYFGEGMVITDDKIHSLTWRSKVGFSWDLETFEPQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMKETRRVEVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKLNDAKADDDEKAGPVSSDGSERRRRQ 438          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A835Z6R5_9STRA (Glutamine cyclotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R5_9STRA)

HSP 1 Score: 268 bits (685), Expect = 3.590e-79
Identity = 132/237 (55.70%), Postives = 168/237 (70.89%), Query Frame = 1
Query:  529 LAFARFSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKL 1239
            +A A++ +L  Y HD  AFTQGL +  G LYESTG+  G+S VR +D ETG+VL+  +L    FGEGMVI +G +H +TW  K G++W+  T E    F F T  G+GWGIT+DG  LI SDGS  L FWDP T + TR+V V L+ G+P+ +LNELE VKG V ANVWF D +  IDP +G VV+  +F+ LYP+A +  ELTS EAVLNGIA+D +EDVLYLTGKLWPR+YKV+L
Sbjct:   75 VAAAQYEVLKVYDHDASAFTQGLGWYQGKLYESTGMQ-GQSEVRIIDLETGEVLKRQQLPSYVFGEGMVIHEGIVHQITWHHKQGYAWNATTLEPTHSFQFETTNGEGWGITSDGTHLIASDGSSNLHFWDPVTYKTTRKVPVTLR-GQPVARLNELEYVKGRVLANVWFSDEILAIDPLSGRVVEVLDFAALYPRAQRAHELTSHEAVLNGIAYDAQEDVLYLTGKLWPRLYKVRL 309          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A835Z8N0_9STRA (Glutamine cyclotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N0_9STRA)

HSP 1 Score: 249 bits (636), Expect = 8.920e-73
Identity = 122/234 (52.14%), Postives = 160/234 (68.38%), Query Frame = 1
Query:  541 RFSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYG-GKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKL 1239
            ++ ++  Y HD  AFTQGL +  GFLYE TG  G  KS   ++ T + +VL   +L DKYFGEGM +++  IH LTW    GF W+  T E    F F T TG+GWG+T +G+ LIVSDGS  L FWDP T +  R++QVK K GRP+  L+ELE   G+V AN+W  D + +IDP TGEV+   +FS +YP+ ++  ELTS +AVLNGIA+DP EDVLY+TGKLWPR+YKV+L
Sbjct:   27 QYEVIEVYRHDAWAFTQGLDWSNGFLYEGTGSCGKSKSEASRLPTMS-RVLLRRQLPDKYFGEGMAVVNDTIHQLTWHHNRGFIWNATTLEPLGSFDFKTSTGEGWGLTWNGQHLIVSDGSSTLHFWDPVTHKTVRKIQVKHK-GRPVDNLDELEFAHGHVLANIWLTDLIARIDPHTGEVMHMLDFSSIYPQIVRDNELTSIDAVLNGIAYDPREDVLYITGKLWPRLYKVRL 258          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A0M1JTN1_9CYAN (Glutamine cyclotransferase n=3 Tax=Planktothricoides TaxID=132607 RepID=A0A0M1JTN1_9CYAN)

HSP 1 Score: 237 bits (604), Expect = 1.880e-68
Identity = 122/232 (52.59%), Postives = 164/232 (70.69%), Query Frame = 1
Query:  544 FSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKL 1239
            + ++  YPHD  AFTQGL +  G LYE TGL  G+S++RKV+ ETGKVLQ  +L D+YFGEG+VI   KI  LTW S+VGF +DLETFEQ  +F + T   +GWGIT DGE LI+SDG++ L+F DP T EE  +V+VK  + +P+ +LNELE + G VFANVW  D + +IDP TG++V   + S L+  + QK +      VLNGIA+DPE D L++TGKLWP +Y+++L
Sbjct:   18 YKIINTYPHDPKAFTQGLVYHQGVLYEGTGLE-GQSSLRKVELETGKVLQIHRLADQYFGEGIVIWQDKIIQLTWTSQVGFVYDLETFEQVGEFTYPT---EGWGITHDGEKLIMSDGTDTLYFLDPETFEEIGQVKVKYGN-QPVNRLNELEYINGEVFANVWMTDWIVRIDPKTGQIVGIIDLSGLHHASGQKMQGND---VLNGIAYDPEGDRLFVTGKLWPNLYEIEL 241          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A832Q6I6_9GAMM (Glutaminyl-peptide cyclotransferase n=1 Tax=Pseudomonadaceae bacterium TaxID=1914538 RepID=A0A832Q6I6_9GAMM)

HSP 1 Score: 231 bits (590), Expect = 2.320e-66
Identity = 116/232 (50.00%), Postives = 160/232 (68.97%), Query Frame = 1
Query:  544 FSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKL 1239
            F L+AEYPHD +AFTQGL  D G L+E TG   G S++R+V+ ETG++LQ   LG +YFGEG+ ++D +I+ LTW+S +GF +D ++F QQ+ F    + G+GWG+T DGE LIVSDGS  L F DP T  E RRV V L +G PL  LNELE + G V+AN+W+ D + +IDP +G+V    + S L     Q+K+   R+ VLNGIAWD E   L++TGKLWP +Y++++
Sbjct:   31 FELVAEYPHDSNAFTQGLTIDQGQLFEGTGR-NGASSLRRVELETGEILQRHNLGRRYFGEGITVLDSRIYQLTWQSHIGFVYDRDSFAQQQTFF---LPGEGWGLTDDGEQLIVSDGSADLRFLDPQTFSELRRVTVTL-EGAPLTMLNELEYIDGQVWANIWYSDVIVRIDPHSGDVTATLDLSSLN----QQKQ---RDDVLNGIAWDAEARRLFVTGKLWPTLYEIRI 250          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A2G9XLR4_9DELT (Glutamine cyclotransferase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2G9XLR4_9DELT)

HSP 1 Score: 232 bits (592), Expect = 4.660e-66
Identity = 116/236 (49.15%), Postives = 163/236 (69.07%), Query Frame = 1
Query:  550 LLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKLNDGKAD 1257
            +L  +PHD  AFTQGL F+ G+LYE TG   GKS +RK+D ETG VL    L   YFGEG+  ++GKI+ LTW S +GF +D++T  ++  F +   TGQGWG+T DG+ LI+SDGS  L ++DPA+ +E RR+ V   D   ++K+NELE VKGY++AN+W+ D++ KI P TG VV  Y+ S L    +QK +L   EAVLNGIA+D ++D L++TGKLWP +++V+   G +D
Sbjct:   51 VLHVFPHDPSAFTQGLIFEKGYLYEGTGGK-GKSVLRKIDLETGAVLLQANLSKAYFGEGITALNGKIYQLTWHSGIGFIYDIKTLIKEGTFRY---TGQGWGLTDDGKYLILSDGSSVLRYFDPASFKEVRRIHVHEADYE-IEKINELEFVKGYIYANIWYTDHIVKISPETGRVVARYDLSGL----VQKNQLEDPEAVLNGIAYDEKKDRLFVTGKLWPMLFEVQFK-GSSD 276          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A2T1CH82_9CYAN (Glutamine cyclotransferase n=1 Tax=Pleurocapsa sp. CCALA 161 TaxID=2107688 RepID=A0A2T1CH82_9CYAN)

HSP 1 Score: 229 bits (585), Expect = 1.580e-65
Identity = 117/235 (49.79%), Postives = 162/235 (68.94%), Query Frame = 1
Query:  532 AFARFSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVK 1236
            A   + ++  YPHD++AFTQGL FD G LYESTGL  G+S++RKVD +TG+VLQ   L D+YFGEGM +   ++  LTW SK GF ++ ET +Q   F + T   QGWGIT + + LI+SDGS  L+F +P T +ET+R+QV   D RP+ KLNELE VKG ++ANVW  D + +I+P TG V    + + +   A     LT+++AVLNGIA+DPE D L +TGKLWP+++++K
Sbjct:   32 ATCSYKVIQTYPHDKNAFTQGLIFDQGELYESTGLE-GRSSIRKVDLDTGQVLQINDLDDRYFGEGMTLWQDRLIQLTWVSKTGFVYEQETLKQIATFSYPT---QGWGITHNNQELIMSDGSNTLYFLNPDTFKETKRIQVTEND-RPIDKLNELEFVKGEIWANVWLSDRIARINPKTGVVTGWLDLTGIIDPA----SLTTKDAVLNGIAYDPESDRLLVTGKLWPKLFEIK 257          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A6L8MS71_9BURK (Glutaminyl-peptide cyclotransferase n=3 Tax=Duganella TaxID=75654 RepID=A0A6L8MS71_9BURK)

HSP 1 Score: 227 bits (579), Expect = 9.290e-65
Identity = 115/232 (49.57%), Postives = 161/232 (69.40%), Query Frame = 1
Query:  544 FSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKL 1239
            F ++  YPHD  AFTQGL +  GFLYESTGL  GKS++RKVD  TGKVLQS  +  +YFGEGM      + S+TW+S+ GF +DL+TFE + QF +    G+GWG+ ++G+ L++SDGS  L F DPAT  E RRV+V   DG  + +LNELEVV+G +FAN+W  + + +ID  TG++    +F +LYP A +     + E V+NGIA+D E+  L++TGKLWP++Y+VK+
Sbjct:   28 FKVVHSYPHDPQAFTQGLLYRDGFLYESTGL-NGKSSIRKVDLATGKVLQSQNIPPQYFGEGMTASGDTLVSITWQSQTGFVFDLKTFEMKSQFAY---PGEGWGLASNGKELVLSDGSATLRFLDPATFLEVRRVKVTA-DGIAVDQLNELEVVEGEIFANIWHTNTIARIDQRTGKITGWIDFGKLYPDAGKGP---NGENVMNGIAYDAEKKRLFVTGKLWPKIYEVKI 251          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A1M7RDL6_9BURK (Glutamine cyclotransferase n=24 Tax=Duganella TaxID=75654 RepID=A0A1M7RDL6_9BURK)

HSP 1 Score: 227 bits (578), Expect = 1.290e-64
Identity = 115/232 (49.57%), Postives = 164/232 (70.69%), Query Frame = 1
Query:  544 FSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKL 1239
            F ++  YPHD  AFT+GL +  GFLYESTGL  GKS++RKV+ ETGKVLQS  +  +YFGEG+      +  LTW+++ GF +DL+TFE + QF +    G+GWG+T +G+ LI+SDGS  L F DP T  E RRV+V   DG  + +LNELEVV+G ++AN+W  + + +IDPATG++V   +FS+LYP A +     + E V+NGIA+D ++  L++TGKLWP++Y+VK+
Sbjct:   28 FKVVRSYPHDTQAFTEGLLYRDGFLYESTGL-NGKSSIRKVNLETGKVLQSKDIPPQYFGEGLTAWGDTLVGLTWQTQTGFVFDLKTFEFKSQFAY---PGEGWGLTQNGKELIMSDGSATLRFLDPKTFLEVRRVKVTA-DGIAVDQLNELEVVEGEIYANIWHTNTIARIDPATGKIVGWIDFSKLYPDAGKGP---NGENVMNGIAYDADKKRLFVTGKLWPKIYEVKV 251          
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Match: A0A2W4U0A6_9BACT (Glutamine cyclotransferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A2W4U0A6_9BACT)

HSP 1 Score: 226 bits (577), Expect = 3.560e-64
Identity = 116/235 (49.36%), Postives = 159/235 (67.66%), Query Frame = 1
Query:  544 FSLLAEYPHDQHAFTQGLCFDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGKIHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKLNDG 1248
            + ++A +PHD  A+TQGL + GG LYESTG YG  S +R+V+ ETG+VLQ V+L D  FGEG+ ++DGK++ LTW S+VG+ +D+ET    + F   T  G+GWG+TTDG SLI+S+GS+ L + DP T E TR V V  + G PLK++NELE + G ++ANV+  D + +IDP TGEV+   N   L P      E T    VLNGIA+D E D L++TGKLWP ++ V+L  G
Sbjct:   49 YEVIARFPHDTSAYTQGLLYHGGVLYESTGRYGA-SELRRVELETGRVLQRVRLPDDRFGEGLALLDGKLYQLTWESEVGYIYDVETLALLDSF---TYAGEGWGLTTDGRSLIMSNGSDTLRYLDPQTFEITRTVAVHDR-GAPLKEINELEYINGVLYANVYRTDWIVRIDPETGEVLGWTNMRGLLPA----NERTPYTDVLNGIAYDAENDRLFVTGKLWPALFHVRLTTG 274          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1427.3315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLP6_ECTSI3.340e-26492.47Glutamine cyclotransferase n=2 Tax=Ectocarpus TaxI... [more]
A0A835Z6R5_9STRA3.590e-7955.70Glutamine cyclotransferase n=1 Tax=Tribonema minus... [more]
A0A835Z8N0_9STRA8.920e-7352.14Glutamine cyclotransferase n=1 Tax=Tribonema minus... [more]
A0A0M1JTN1_9CYAN1.880e-6852.59Glutamine cyclotransferase n=3 Tax=Planktothricoid... [more]
A0A832Q6I6_9GAMM2.320e-6650.00Glutaminyl-peptide cyclotransferase n=1 Tax=Pseudo... [more]
A0A2G9XLR4_9DELT4.660e-6649.15Glutamine cyclotransferase n=2 Tax=Deltaproteobact... [more]
A0A2T1CH82_9CYAN1.580e-6549.79Glutamine cyclotransferase n=1 Tax=Pleurocapsa sp.... [more]
A0A6L8MS71_9BURK9.290e-6549.57Glutaminyl-peptide cyclotransferase n=3 Tax=Dugane... [more]
A0A1M7RDL6_9BURK1.290e-6449.57Glutamine cyclotransferase n=24 Tax=Duganella TaxI... [more]
A0A2W4U0A6_9BACT3.560e-6449.36Glutamine cyclotransferase n=1 Tax=bacterium TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1427contigEcto-sp13_S_contig1427:4002..12949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score752.3
Seed ortholog evalue1.3e-214
Seed eggNOG ortholog2880.D8LLP6
Model size2646
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.Glutamine cyclotransferase
EggNOG OGs2QUQC@2759,COG3823@1
Ec32 ortholog descriptionGlutamine cyclotransferase
Ec32 orthologEc-04_004960.1
Cds size1317
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1427.3315.1prot_Ecto-sp13_S_contig1427.3315.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1427 4002..11620 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462763.0560164-CDS-Ecto-sp13_S_contig1427:4001..43851681462763.0560164-CDS-Ecto-sp13_S_contig1427:4001..4385Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 4002..4385 +
1681462763.0677638-CDS-Ecto-sp13_S_contig1427:6133..62771681462763.0677638-CDS-Ecto-sp13_S_contig1427:6133..6277Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 6134..6277 +
1681462763.0835695-CDS-Ecto-sp13_S_contig1427:6507..65661681462763.0835695-CDS-Ecto-sp13_S_contig1427:6507..6566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 6508..6566 +
1681462763.0980144-CDS-Ecto-sp13_S_contig1427:7710..78731681462763.0980144-CDS-Ecto-sp13_S_contig1427:7710..7873Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 7711..7873 +
1681462763.1084292-CDS-Ecto-sp13_S_contig1427:8542..86251681462763.1084292-CDS-Ecto-sp13_S_contig1427:8542..8625Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 8543..8625 +
1681462763.1179597-CDS-Ecto-sp13_S_contig1427:8953..90741681462763.1179597-CDS-Ecto-sp13_S_contig1427:8953..9074Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 8954..9074 +
1681462763.1259456-CDS-Ecto-sp13_S_contig1427:9411..95731681462763.1259456-CDS-Ecto-sp13_S_contig1427:9411..9573Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 9412..9573 +
1681462763.1347687-CDS-Ecto-sp13_S_contig1427:10483..105711681462763.1347687-CDS-Ecto-sp13_S_contig1427:10483..10571Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 10484..10571 +
1681462763.1437044-CDS-Ecto-sp13_S_contig1427:11507..116201681462763.1437044-CDS-Ecto-sp13_S_contig1427:11507..11620Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 11508..11620 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462763.155264-UTR-Ecto-sp13_S_contig1427:11620..129491681462763.155264-UTR-Ecto-sp13_S_contig1427:11620..12949Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1427 11621..12949 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1427.3315.1

>prot_Ecto-sp13_S_contig1427.3315.1 ID=prot_Ecto-sp13_S_contig1427.3315.1|Name=mRNA_Ecto-sp13_S_contig1427.3315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=439bp
MSTRALRRSIGRKDKERKGSGPRGTSTPQLPVRSNSKGGILARTVSKLFQ
PSASDMDADTSTRNALAGIRKRKAGGGGWRRMPRAGIVVLSSALCAALLW
AGVGSLSQPPAAAGGAGANSTRGRRGSESKTSTTASSAGAAATATAAGPS
ARKDDSQETASRNLSRRPELKTRGGQLAFARFSLLAEYPHDQHAFTQGLC
FDGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLGDKYFGEGMVIIDGK
IHSLTWRSKVGFSWDLETFEQQEQFHFNTMTGQGWGITTDGESLIVSDGS
EFLFFWDPATMEETRRVQVKLKDGRPLKKLNELEVVKGYVFANVWFDDNL
YKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYL
TGKLWPRMYKVKLNDGKADDDGEAGPVSSEGNERRRRQ*
back to top

mRNA from alignment at Ecto-sp13_S_contig1427:4002..12949+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1427.3315.1 ID=mRNA_Ecto-sp13_S_contig1427.3315.1|Name=mRNA_Ecto-sp13_S_contig1427.3315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1427:4002..12949+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCACGAGGGCACTGAGGAGATCCATTGGCAGAAAAGACAAGGAGCG AAAGGGTAGCGGGCCGCGCGGTACTAGTACACCACAACTCCCCGTGCGGA GCAACAGCAAGGGGGGCATCTTGGCGAGAACCGTGTCCAAGCTTTTCCAA CCGTCTGCTTCCGACATGGACGCGGACACCAGCACCCGAAACGCGCTGGC GGGGATCAGGAAGAGAAAGGCGGGCGGGGGGGGCTGGAGGAGGATGCCGA GGGCCGGCATCGTGGTGCTTTCTTCCGCGCTTTGTGCGGCGCTGCTCTGG GCTGGGGTGGGTTCTTTGTCGCAGCCGCCTGCTGCGGCGGGAGGAGCGGG GGCCAACTCCACAAGAGGTCGAAGAGGCTCGGAGGTGTGTGAGATCCAAC CAAGACCTAGTGTGCTGCCCGCTAAACGTGTACAGCAGTCGCTCAACTGC TGTGATGCTGGTGGGTACTACACAACGGCAGTCCTGATCTGTTCCACAAA GAAATAAGGTGTCTGTGCCGTTGGGTACCGCATGCAACTTCACTTTCCTG TTCTCGCAAGTAAATGTTCTCGCGAAGGAATCGACGAGAAGCCTGTTGAG CGAGTGCACCACCATGCAGGATGACTTGTACTTGATTCCATCGGTAAGCG GTGCCGACTGCACGGACGGGTGGTATGACTAGCAGTGGCACAACGGAACT ATCTATGTCAAACACGTAAGACGGAGCAAGCGAGACTACGCGTGGGCGGC GGCAGGTCTGGAGGCTCAACCCACGATCACTCATTTTGGTCATTTTGCCG TATGTGGTATCTCGTGCCACAATTGCATCGAAAATTGCAAAATTGAAACG AATGTGGAGTAAATATTTTAGTAAGAAGCTGTCCTCGGCTGTGAGGCCTG TTCGAACTACAACATGAGCGTACCAAGAGGTACATGTCACGAAGTCTTGT TCGAGTTCATGTACAATTAATCGTCCCGTCCCTTACCCTCAACATGGAAC TGCCTCGAAGTAAAATACTTGAAGTAGTGAACAACAGGAACTCAGGATTT ATCTAATAGCTGGCAAGAGCAACACCGAGAGCTTTGTAGTATAGGATTCG GACTGGCAGCGGCAAGATGGAGACATTTTCCGGCGACACACGAGACGTTT TGGTTCGTCTAGCGCACTGTCCCAGTTCTCCTTGTGGTCGATCGGATTCC GATTTCGAATTTTATCAGGCGTACATACGATCACTTCAAAAAATTCATTG CCAGACTTTCCGGTTCGAGGTACAGCAATGGAGAGCCCTGAGCAACGCCG GTATGTGCCCGCCGGATCGACCGGCGCTGTCCAGAGGAACCGGCGCTATT CAATGTACAGAATCACTTGGTGATTCAGTCTACATAATCCCGGCAAAGTC ACCGGCGTTATACAGGGCCACCGGTGCTAGTCAACCGGTGTTGTTGACGT CCCCCCGCTGTAATACCACTGCCGTGGAAGGGAATGTGTTGGATGTCTTA GCAGTGACTGGCGGAGATATCTTGCTGGATACTGGGCGTATTTCTGAGCA TGGTTGGGCCCATGCACTGAAGCATCAGTGATGAGTGCTAACGAAAAGAA AAGCCATTCTTTTGGTACACATTTTACGAGTATCCAATGCAGTCCTCTGC TGGGTGAAGGAGACAAAGTATCCGGAAGAAGCCCTCGTTGAGGTCGTGAG TGCTTTAAATTCGGCCTTTACAGGAAACACGTCGCGGTGTCCTCTGACAA CTTGCTGGATTACTTGCCACTGTTTTTTCAATCTAGCAACTTGTTCTATC CGGAACATTGGTTGTCTTTTTTTCAAGTTGCGCTTCAGCTTTGTTCGCTC CTGCCCCGTGGGGGGCTCCGCCGCGGAGAGCGAGCGGTGCAGCGACGGTT TGTGAGTGGTACACTCAGCTAGCTAGCACGCGCTGCACAAGGACTTCATT TTCCTTTCGCCTCGATGAGAGCTCACAGCTTCCTTGATGATGTTGGACGC GACTTTTTTTAGTGATCGAAGCACGAACAGATGAAGGTATTGGACAGAGA GATTCGAACGATTTTGAATACGAAGACGACAGCAACAGCAGCAACAACAG CATCAACACCCGCTTCTCATCCGTGCGTACAGAGTAAGACGAGCACAACG GCATCTTCGGCAGGGGCGGCAGCAACGGCAACAGCAGCGGGGCCTTCGGC GAGGAAGGACGACTCTCAGGAGACCGCCTCCCGGAACCTATCTCGACGTC CAGAGCTGAAGACGAGGGGAGGACAGGTGAACAAGCAGATCTCCGTAGAT CTTGGAAGGCAGCAGTTGTACTTGGGCTCACGGAAGCTCTGTGCGTTGTC GCTGCATGTGCCGCGATTGCTGTTTTGTCTCACCTACCAAAGGACCTGCA TGCCCTCTCCTTTTCTTTCCTTCCCTTGGTTCGCCGTGCTCGCCTTGCCT ATTTTTTGTTTCTCGTTTGACAACAACGCGTGTTGGCCTATTTCTGGATC TCGCAGCTGGCCTTCGCCCGCTTTTCCCTGCTCGCGGAGTACCCTCACGA CCAGCACGCATTCACGTGAGTGTCGTACACGAGGCTTGTCTGTTGTTGTT CAAGTTGGTGGAATATCGCACGCGCTGACTGCGTGGTGTACAGCAGTTCG GAAGCACATGATTGGGTGTGTGTGCTTTGAGTTGTCGCCATTGCTTGCAG CTTCAGGCAACGGCTTTGGTTATTTGTGTGATGGCAAGGAGAAGATGTCA ATGGTCTTCGAATGTGCCACCAAAGCGGGCAACGAAAAGAACGGCGTCAT GGGGGGGGGGCGGCTGTTGTAGACAGCTTCACGGCCGTAATATCACGCGG CGAAAGCTGCTCTTTCTTTCGATTGCAGCCCTCTCTCTAAGCACCCCTGC GCACATGTGTGGCCTTATTTGAAAGCGCCATGTGCAGGAAGGTGATGGTG CGCTATGTGACAAGTATGCCGGGAACGAATTTGGCGCGCATCGAAAGTGC TGTTTTCGACCCTTAAATATCGCGGTGGGGTCCTACTGACTGCATGGCGA CATGTTTCTTTTATCGAGCAAAGAGGTTGGCACAGGAAGGGAATTACAGC AGGAGAAAAATACAGCACTGGACACATGCCTACAAACGCCGTGTTTGTGT AGGTTGGTTTTCCCCTGGAATTTTTTTGTTATGATCGAAATCCTTATTTG TATCCTAACCGGGTTTGCTTCGTAACATACACGATAAACATGTACGTTGT TACTAGAAGTCGCGCCTTATGTATCCGTGAGACACTGCGCAGTCGTTGCA CGAACAGAAAACATGTATATGCATTGTGTATGTGTGTATGTTTTTGTGTA TTCCAACCTTTTTTTCGAAGAAATGTCCAAATGCTAAGCCTATCAGAGAA GAGCTGACGCGCTTAGCGTTCGCTGCACCACTACCACCACCACCACCATG TGAACCCTCTCTCTCACAGCCCCACCTCCGAAACGCTTCTTATCCAGAAG TCACATGTCACTTAAGCGTCTCCAGAGCTTTTATCTATCCAACCTACTCT CTGCTGTTGCCATGTACCGCTCCGCGTTTTTTTTTCTTCAGAATATTTGG AATCCAACCTGTTCTCTGTTATTGCTATGTCCTGCTCCACGACTTGAGCG GTATGTATGAATCTGGCGGCACATGGGTCCCCTTTTGTTGTTTTGTTTCG ATGTTACAGTCAGGGGCTGTGCTTCGACGGGGGCTTCCTGTACGAGAGCA CCGGGCTGTACGGCGGGAAGTCTACGGTTAGGAAGGTGGACACGGAGACG GGGAAGGTGCTGCAGAGCGTGAAGCTGGGCGACAAGTACTTCGGGGAAGG GATGGTCATCATCGATGGCAAGGTGACTAGTCAGAATGAGCGTTACACAG CGTTTCTTACTAGAATCGTTGTTGTGCTCGTTGATTGCTGTGGCTGTTTG CTGCTACTGCAACTGTTCTTGTTGCTGCGGCTCAAGTCGTGGTTTGTCCT GCGGCAGGTGTTGTTTTGGTTTTGTTGTTGTTGCTCCTGTTTTAGCGTCT GCTGTTGGAGGTGGCGTTCGTTTGGTAGCAACTAGGCCAGTTCTGGCCTG GGTTTTCGAAGTGCCTCTGAGAGGCCTGGTGAGTCGGAACCAATGAAAGG GGGAAAATCAGTAGCTGAGACTTAACACTAAAGCAAGAGCCAAGAATGCA ACAATAAGAGGATAGGAGACCAGTGGAAGAGAGCTCCGCAAGCGTTCAAG AGAAATACCGACCAACACGCGGGACGACTGCTGGTTTGTTGCCGCCATCC CCCCCCCCCCACCGGTTTTCTTTTGTCGTCGACCTGCGGACGAAGACGGC CCAACACATGCTTAAACGACTTTGCTGGTGCGCAAGAGCACAGCAGTGGT GTCACTTCGCCGATGATCGATCCTTGGACCATCCCCAATCTCACACGTAC CCCTCCCCGCACGCCGCCTCGCGCCCTTCCCTGTCCCGCCCGCGCCGCCG CTGTTCTCTTTTTTTTTCGGCGCAAATAAACGGAATATTAGATCCACTCG CTCACGTGGCGATCTAAGGTTGGCTTCTCCTGGGACTTGGAAACCTTCGA GCAGCAGGAGCAATTCCATTTCAAGTAAGCACATGTGTCGCTCGATCTGC GTAGCCTTGAGGAGTGCCATGTGTAATGGGGCGTTGCTCACTGCGGTAGG CCTGGATATGGAGAGAAGCCATTCAGATGGCCTTCGCTTCTCGCTCGATC TGCGTGGCCTTCGCTTCCGTGTCCCAGTATAGTACCTGTTTTTTAGACTT AGGCGGCATTGTCCTGAAGGCTCGGCGGCAACCAACAGGACATATACATT TTTTGACGCACCTAAAGTGTGACCCCTTGTTATCCTCTCCTCCAAGCACC CCGCTCAACTTTTCCCTGCTTTTGTGGTGAACCGTACCTGACTACACTGC AGTACAATGACGGGACAAGGGTGGGGGATCACGACAGACGGCGAGAGCCT GATTGTTAGCGACGGTAGCGAGTTCCTCTTCTTCTGGGACCCGGCGACCA TGGAGGAGACCAGACGAGTGCAGGTAGGTCAGAGAGGGAGGGGAAAGGGC AGACAGAGACAAGAGAAAGATGGATATGTATATAGAGAGGGACAGAGAGA GGGGAGGGTTGAGCGATAGAACGACAGAAGTACGGGAACAGCGAGAGAGA GAGGGTGAGAGAGAGAGAAGTGTTGTAGTGTACTTTTTCCGAAAGCAGGC GAATAGATCCATAGATTGCTATAGCATGTGGTGTGTATGTTTCTTGTAGG TTTTGGCCTGGGTGTTGCGGTCCTTGATGCCGACGGCGTATTTGCCATTC TGCGTATTGCTTGATGTTTGGCGTGGGTGAATGATGTCGGCAACACCGCA TTTGGCGCAGGTCAAGCTGAAGGACGGCCGGCCGCTGAAGAAGCTCAACG AGCTTGAGGTGGTCAAGGGCTACGTGTTCGCGAACGTGTGGTTCGACGAC AACCTGTACAAGATCGATCCCGCCACGGGAGAGGTCGTGGACGCCTACAA CTTTTCGGAGCTTTACCCCAAGGTAATTCTTTACCTCAGAGCAGGCGTGG GTCGCTGCTTCGCCGGCGGCGCTGTGCCGGCAGTTGTTTCGGGAAAGCTT AGCGCGGGGAACATGGGAGATTTTGGTATTGTATTCTAAACGAGGAACGC AGCCGGTCAGCCATAGGTGTGTAGGCGTGCCGCGGTTGGTGATAGTGACC CCAATCCAATCGTTGAAATAGAGAAGTCCTTCACAGCAGCACACGGCTCT GTCTTTCGTACTTGTACGTAAGCGTTTTCGTCCGGGGGATGATGTCCCTG CGTGGTTGAACAGGACAACTCTTGTGGCATTAATGTTTGTGTGTGTTCGT CCTATCTGTTCTGGCGCCGGTTTTGTTATTGTGTTATTGCCCCACCTTTC CTTGCGGTGATTGCCTTTTTGTCGCGAATGAAGAGGAAAATACTTGCTCG GACGGGGCAACTCTCTCCCCCGAGTGGCGGAATGGGGAGGAAAACACCGG ATTGAAAAGAGTAACTCTTTGGCCAAAGGACAGAATGAGGAGCAGGAGCA ATACCTGTGTTCTCTCCCCGAATGGAAGAATGAAGAGGAGCTACCTGATC GGACAGGGTAAAGGAGCTACAGACTGCGGTTATCCGGACCGGGGTCGAGT ACCAAGCACGAAGTCACCGGGGGCACGGAATGATGAATGCCCCGTCCCTT CCCCCGTCTTTAGCGGGGATGCCGGGGGGCACCATGTACGGGGCTCCCGA GAGATCAATATAACAAGCCGCTGCTGCCCAATTTTGAATGTTCGGGTCAG CAGAGGAAGCGACGAAAACTTTGTCGTGTGCGGAAGGAGCCGCGGCATCC TGACGTAGACCCTTCCGTTTCAGTCTCTCTCTCTCTCTCTCTCTCTCTCT CGAACCCCGCCTCGCGTCCGCTTGCCCCGCAGGCGTTGCAGAAGAAGGAG TTGACGTCTCGAGAGGCGGTGCTGAACGGCATCGCTTGGGACCCGGAAGA AGACGTCTTGTACCTCACAGGTGTGTGCAGCAGTGCTGGAAAGGGAGAGG TTAATTTCTTCTTCAAGCAAGACATGACAGGGGTTTCCGATTAAGCCAAC ATGTTGGACATTGTATGCAATCGGGAAAGTTGGCCCCCTCTGTTTCTCCT CACCTCTTTGAAGGTGTTTTGCTTGTATCATCGACCACGCTCGCCGAGTG AGTCCTTGGAAGTCGCAGCTTAGCAGAAGATTACAATCGCAGACCGCTCT AGTCACGGGGCCTACTTAGCGGGGCCGCTGTTCTGAAAGGCTGGACGTTG GAGTCTGAAGGCATTGGTATTACTCGAATTGAAGTTGGTGCTTGGTGCTG GTCCCGCCACCGCAGGCACATCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCGCCCCCGCCCCCCCCCCCCCTCCGCCGATTTTTTGTTGTGTTGTGT GGTCGTTGCTGCCTCCACCNNNNNNNNNNGGGGGTGTGTTGGTGTATTCC TTTGTTTTTTCTTCTTTTAATTTTGGGTTGTGTTGTCGTCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTGCCTGGGCTTTGCCTCA CGCGCCCATATCGTTGATGTTGATTGGTTGTTAGGGCGCATCGAATGAGG TCAGAAATGCGCGCGCCATCCGCTCGTTTCCTTTGTTGTTTTTCTAGCGT AGGGTCCTGGAAGGGCGGCTTCCCGCCCCCTGGCTTTTTGGCTCCTTCGC TAAGCTTCCTTGTACTCGGTGTGTGAGTTCGTGTTGCGACGAAGACATGT ACCCAAGCTTCTACACGCTCGGTTCTATTTGTCTTGCCCCCCCTGAAGAA CGCCACTTTGGTGGAACCTCTGTTTCCTGCTGCTGCTCTACACCCGCCCT TCCTGTATGGCAAACCTCTGTTGCTGCATGCTGCTGCTCTTCACAACAAA CGCCAGGCAAGCTTTGGCCCAGGATGTACAAAGTCAAGCTGAACGACGGG AAAGCGGACGACGATGGAGAGGCGGGTCCGGTTTCCTCTGAAGGCAACGA GCGGAGACGACGGCAGTAGTAGCGGATAGCTTCGCTTGCACGGAGACGTC TCTTTGGCGCACCACACGACAACACGCGCAAGATGTGCCTTACGCGGCGA ACTCACTACTGCTGTAGGGGGTCTCGAGGCTTTGGACCGTGGGCTCCTTT TGTATTTGGGTGGGTTGTATTGTAGTTGACATGTATGACTTGGTTGGCTC GGGAAAGGTATGGGCGCTCTGCGTGTCGTTCGGCGCTCAGTTCCTTCCCC GAAGTTTTTCGGCCGCACGCACAGAACTTTCGAGTGTGGAGAGACAAGAG AGTGCTGTCCTCCAACCACGAAGGCGCACGCAGTACTCACCGAACGGTAG TGAACCCCTTTTGAAGCAACCTTCGGTAGGTAGTACAGCAGTGTTGCTAT CCGCTGCCGTGCGTCCGTTCTGCAGGTCAGGGCGAATGAATCTGCGCGCG CTCCTGATGCTGAGGGCGAAAGGGGCCTCTGGTGCTTTTCCAGTGTTTCG TTTGCGGTGCTCTTGAGCGCTGCCGCCGCTTTGTGAGGCCTGACTCCGCT CTACGTCATGGGGGGTTTGGTGAACTGCTGGCCTGACTTGAGCTGCATTG AGTGCGTTTCCCTTGGGTCGGTTTATTGTTTGGTGTTGTGAGTGCAATAG TGTTGGAGGTGAGTAGTTCCGTAGCGAGTGCAGCGACCAGAACCAAGCCG TCGCTGCTGTGCTTCCCTGACTCTGCCGTGCTGCCGTGACTCTGGTTGAA CGCTTGCTCTCTAGATATGAATAGAAACATAAAACACCAGAACGCTCGGT GAGTGCCTAGGACACCTGGTGCCACGCTGTCTCTGACTACAAGACGCGTG TGGACTTGATGATCTATGTGGCTCAGATACATCAAGGGGCAGGGCCAAAA TTTGCAAGAGGCAAAAGGGTATTATAGTCGGTAGGTGTGGACATTGGGGC GTATGGGGTGATGAAGAGGGGCGTCCTTATGTTGATGACAAGCGTGTTGT AGACGGAGACTTTATATAGTTGCGTGACTCTCAGCTTAACCTGGTAGATG GAGGGTATCGGTTCAGCTCGCCATCAGCAGTATTGGCGGGCTGAAATGAT CAGTCATGTGCCTCCGCGTCCCTCAGCTGCTAAAACCCGGGTGTGCAGAG TTTGGGGTGGGTGCGACTACTTGCTGCAAGGGGATTATAACTTTTTCATA TCTTCCATAAAAAGGGAGTCGGAGCTGTCAAGTTTTCATCAACTATGTCT CGGAACCGTATTCCCTGCTAGTACGATATCCCCGCCTGACCGGGGCTGGT CCACGACCACGTCGATGTGATTCATGAGCGAGGCTTTTCGTAGGGGCG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1427:4002..12949+

>mRNA_Ecto-sp13_S_contig1427.3315.1 ID=mRNA_Ecto-sp13_S_contig1427.3315.1|Name=mRNA_Ecto-sp13_S_contig1427.3315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1317bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1427:4002..12949+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCACGAGGGCACTGAGGAGATCCATTGGCAGAAAAGACAAGGAGCG
AAAGGGTAGCGGGCCGCGCGGTACTAGTACACCACAACTCCCCGTGCGGA
GCAACAGCAAGGGGGGCATCTTGGCGAGAACCGTGTCCAAGCTTTTCCAA
CCGTCTGCTTCCGACATGGACGCGGACACCAGCACCCGAAACGCGCTGGC
GGGGATCAGGAAGAGAAAGGCGGGCGGGGGGGGCTGGAGGAGGATGCCGA
GGGCCGGCATCGTGGTGCTTTCTTCCGCGCTTTGTGCGGCGCTGCTCTGG
GCTGGGGTGGGTTCTTTGTCGCAGCCGCCTGCTGCGGCGGGAGGAGCGGG
GGCCAACTCCACAAGAGGTCGAAGAGGCTCGGAGAGTAAGACGAGCACAA
CGGCATCTTCGGCAGGGGCGGCAGCAACGGCAACAGCAGCGGGGCCTTCG
GCGAGGAAGGACGACTCTCAGGAGACCGCCTCCCGGAACCTATCTCGACG
TCCAGAGCTGAAGACGAGGGGAGGACAGCTGGCCTTCGCCCGCTTTTCCC
TGCTCGCGGAGTACCCTCACGACCAGCACGCATTCACTCAGGGGCTGTGC
TTCGACGGGGGCTTCCTGTACGAGAGCACCGGGCTGTACGGCGGGAAGTC
TACGGTTAGGAAGGTGGACACGGAGACGGGGAAGGTGCTGCAGAGCGTGA
AGCTGGGCGACAAGTACTTCGGGGAAGGGATGGTCATCATCGATGGCAAG
ATCCACTCGCTCACGTGGCGATCTAAGGTTGGCTTCTCCTGGGACTTGGA
AACCTTCGAGCAGCAGGAGCAATTCCATTTCAATACAATGACGGGACAAG
GGTGGGGGATCACGACAGACGGCGAGAGCCTGATTGTTAGCGACGGTAGC
GAGTTCCTCTTCTTCTGGGACCCGGCGACCATGGAGGAGACCAGACGAGT
GCAGGTCAAGCTGAAGGACGGCCGGCCGCTGAAGAAGCTCAACGAGCTTG
AGGTGGTCAAGGGCTACGTGTTCGCGAACGTGTGGTTCGACGACAACCTG
TACAAGATCGATCCCGCCACGGGAGAGGTCGTGGACGCCTACAACTTTTC
GGAGCTTTACCCCAAGGCGTTGCAGAAGAAGGAGTTGACGTCTCGAGAGG
CGGTGCTGAACGGCATCGCTTGGGACCCGGAAGAAGACGTCTTGTACCTC
ACAGGCAAGCTTTGGCCCAGGATGTACAAAGTCAAGCTGAACGACGGGAA
AGCGGACGACGATGGAGAGGCGGGTCCGGTTTCCTCTGAAGGCAACGAGC
GGAGACGACGGCAGTAG
back to top