mRNA_Ecto-sp13_S_contig14265.3311.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: D8LC77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC77_ECTSI) HSP 1 Score: 290 bits (743), Expect = 4.390e-96 Identity = 154/166 (92.77%), Postives = 163/166 (98.19%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLISFRP 498
+ISEKPRLAAMLTDPRFSKAM+LMSTSPKDALGMFESSAEARESF ELMSLLSKHFTA+G+AADEKAAAEEADR+RVADGPLAQEALRRAAEGVGVAAT ATAEETATV++VLQQPEL+ELLMDPGMQRVLQECG PQELARYMRHPEFGPKLQ+MAKAGLISFRP
Sbjct: 184 KISEKPRLAAMLTDPRFSKAMELMSTSPKDALGMFESSAEARESFTELMSLLSKHFTAMGDAADEKAAAEEADRRRVADGPLAQEALRRAAEGVGVAATPATAEETATVDKVLQQPELRELLMDPGMQRVLQECGEPQELARYMRHPEFGPKLQLMAKAGLISFRP 349
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: A0A7S2RZ79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ79_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.990e-21 Identity = 63/169 (37.28%), Postives = 96/169 (56.80%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEA----ADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAT---HATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLI 486
+ ++ P LA L+DPR++ A+Q + +PK A+ F+ E E + +HFT +G+ D AA GPLA++A+RRA+E + + + EE A V+R++Q EL+ELLMD G+QRV+ EC P +L YMR +GPKL+ +A AGL+
Sbjct: 225 KFAKNPLLAKGLSDPRYTAAIQELQKNPKQAMEKFQHDPELSAFLNEFCQTMGEHFTKLGDQQQPPVDPATAA--------VHGPLAEDAVRRASERAKQSPSPPPQPSKEEDAQVQRIMQDTELRELLMDSGLQRVMMECQQPGKLQMYMRDKTWGPKLRKLADAGLV 385
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: A0A835Z085_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z085_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 5.470e-18 Identity = 58/176 (32.95%), Postives = 82/176 (46.59%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHAT-----------AEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLISFR 495
+I+ +P LAA L PRF++A++LM P+ A+ +F A+AR F EL+ LL HF +G + A A V R+L L+ELL+DPGMQ VLQEC P L Y HPE+GPK++ +A+AGL+ +
Sbjct: 32 KIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: A0A6G0XYI5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYI5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.270e-17 Identity = 52/166 (31.33%), Postives = 91/166 (54.82%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLISFRP 498
++++ P+L+ L +PRF+ A+Q MST+P A+ +++ + F + M+ + HF +G+ +EK +R + + ++AL+ + + EE A V+R+L PEL ++L DP MQ+VL C P L YM +GPK++ +A AGL+ P
Sbjct: 124 KLAKDPKLSQALQNPRFTAAIQEMSTNPTAAMLKYQNDPDVGVMFKDFMNFMGHHFEHLGKIEEEK--------ERKSREEIQRDALK---------SMSTSPEEDAQVQRILADPELMDILGDPAMQQVLHACQKPCALRSYMNDAIYGPKIRKLADAGLVQLHP 272
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: A0A7R9U615_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U615_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.100e-17 Identity = 62/175 (35.43%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRV---ADGPLA------QEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECG-NPQELARYMRHPEFGPKLQVMAKAGLISFR 495
+I E PRL A +++P F + M ++P L + S E +E E M L+ KHF A+G D K+ A++ ++++V A GPLA +EA ++A G G H + E V+ LQ PE+++LLMD +QRVL E NP R M+ P+ K++ MA GL+ +
Sbjct: 200 KIQESPRLMAAMSNPAFGALLGRMQSNPSQVLKELKDSPETQELLKEFMVLMGKHFEALGAEDDAKSEAKQEEQRQVEQAARGPLAKKILEEEEAKKKA--GSGSTLDHLSDRERKEVDDHLQNPEVRQLLMDEDVQRVLVEASTNPAAFHRAMQSPDIARKIRRMAHLGLVQIQ 372
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: A0A067CSB9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CSB9_SAPPC) HSP 1 Score: 78.6 bits (192), Expect = 1.580e-14 Identity = 52/166 (31.33%), Postives = 81/166 (48.80%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLISFRP 498
++++ P+L L +PRF+ A+Q +ST+P+ A+ ++ A+ + M + HF A+G +VAD A+ R A E AA H T +E A VER+L PEL+ Q C P L RY++ P GPK++ + AGL+ P
Sbjct: 115 KLAKNPKLCIALQNPRFTAAIQELSTNPEKAMAKYQHDADVSAMLRDFMQFMGAHFEALG---------------KVADADAAKAKQRHALE----AAAH-TPQEQAQVERILGDPELQXXXXXXXXXXXXQRCTAPGVLLRYLQDPIVGPKIRKLEAAGLVQLHP 260
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: A0A024UTJ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTJ1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.850e-13 Identity = 45/166 (27.11%), Postives = 85/166 (51.20%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLISFRP 498
++++ P+L + +PRF+ A+Q MS++P A+ ++S F + + + +HF +G+ +EK+ P ++ ++RAA + + T +E V+RVL PEL+E + C P L+ +M+ P +GPK+Q + +AGL+ P
Sbjct: 123 KLAQNPKLCQAMQNPRFTAAIQEMSSNPTSAMLKYQSDPHFGAIFKDFLEFMGQHFEELGKIEEEKSK------------PPTKQDIQRAA----LTSMPTTPDEEVVVQRVLADPELQEXXXXXXXXXXXRACQQPGVLSTFMKDPVYGPKIQKLVRAGLVQLHP 272
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: T0Q0K0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q0K0_SAPDV) HSP 1 Score: 73.2 bits (178), Expect = 1.570e-12 Identity = 46/166 (27.71%), Postives = 77/166 (46.39%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLISFRP 498
++++ P+L L +PRF+ A+Q +ST+P+ A+ ++ A+ + M + HF A+G+AAD AA +A++ + A T +E A V+R+L P Q C P L RY+ P GPK++ + AGL+ P
Sbjct: 114 KLAKNPKLCVALQNPRFTTAIQELSTNPEKAMAKYQHDADVSTMLRDFMQFMGAHFEALGKAADADAA--------------------KASQRHALEAAAQTPQEQAQVQRILSDPXXXXXXXXXXXXXXXQRCTAPGVLLRYLHDPIVGPKIRKLQAAGLVQLHP 259
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: F0Y4B4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4B4_AURAN) HSP 1 Score: 74.3 bits (181), Expect = 2.360e-12 Identity = 52/162 (32.10%), Postives = 82/162 (50.62%), Query Frame = 1
Query: 4 ISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLIS 489
++E+P LA + DPR A++ + PK F+ E ++ + ++ HF +G A AD K GPLA + + AA+G G A T EE V+ VL L++LLMDP Q ++Q C +P+E R M +P+ ++ +A AGL+
Sbjct: 186 MAERPALARGMGDPRCQAALEALRKDPKAGAKQFDDDPELKQFLTDFCEVMGGHFEKLGAAXXXXXXT--ADEKEQL-GPLAAKVVEDAAKGQGPAPAK-TPEEIKQVDDVLNNAALRDLLMDPKTQLLMQRCADPREFQRAMMNPDERAIIRKLADAGLVK 343
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Match: W4GNU8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNU8_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.370e-11 Identity = 46/166 (27.71%), Postives = 80/166 (48.19%), Query Frame = 1
Query: 1 QISEKPRLAAMLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAATHATAEETATVERVLQQPELKELLMDPGMQRVLQECGNPQELARYMRHPEFGPKLQVMAKAGLISFRP 498
++ P+L + +PRF+ A+Q MST+P A+ +++ + F + + + HF +G+ ++ A D +R A +++ + EE A V+R+L PEL VL+ C P L++YM FGPK+Q +A+AGL+ P
Sbjct: 130 KLGRNPKLCQAMKNPRFTAAIQEMSTNPTAAILKYQNDPDFGVMFKDFLQFMGHHFEELGKIEEKTAIPTRDDIQRQALTSMSR-----------------SPEEDAVVQRILADPELXXXXXXXXXXXVLRACQVPGVLSKYMNDKVFGPKIQKLARAGLVQLHP 278 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14265.3311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14265.3311.1 >prot_Ecto-sp13_S_contig14265.3311.1 ID=prot_Ecto-sp13_S_contig14265.3311.1|Name=mRNA_Ecto-sp13_S_contig14265.3311.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp MLTDPRFSKAMQLMSTSPKDALGMFESSAEARESFAELMSLLSKHFTAIGback to top mRNA from alignment at Ecto-sp13_S_contig14265:2563..3063+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14265.3311.1 ID=mRNA_Ecto-sp13_S_contig14265.3311.1|Name=mRNA_Ecto-sp13_S_contig14265.3311.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14265:2563..3063+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14265:2563..3063+ >mRNA_Ecto-sp13_S_contig14265.3311.1 ID=mRNA_Ecto-sp13_S_contig14265.3311.1|Name=mRNA_Ecto-sp13_S_contig14265.3311.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14265:2563..3063+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |