mRNA_Ecto-sp13_S_contig14264.3310.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: A0A6H5K7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W6_9PHAE) HSP 1 Score: 688 bits (1775), Expect = 5.420e-248 Identity = 344/367 (93.73%), Postives = 353/367 (96.19%), Query Frame = 2
Query: 209 SSATQKPLSVQQRIDVVVVPEGPSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGSKFIILAPHNLASYFTGDGGLAVFEKQLLPHDAVLYNFEQIPCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYTLWDYSEENARRLLDMGIHADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFTPPERLAETCQFYLQRPGSRMSIAESGRRLFEQHLEADILRRPVGRHLAAHRVLDR 1309
+++TQK L VQQRIDVVVV EGPSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKG KFIILAPHNLASYFTGDGGLAV EK+LLP DAVLYNFEQIPCRWPRESTNL EPGTRD+SLVSARTLHIYGSYTLWDYSEENA RLLDMGIH D+VPLGFSSKLRSSSLLVAGGRVL+EREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLF AAFDTVSARSKIVLNLNAFEGATTT+IESRSNGSSPGDLC NGEWK+PRLARLLANGRFIVSEMSGSDSERAKFSGGVVF PPERLAETCQFYL RPG RMSIAESGRRLFEQHLEADILRRPVGRHLAAHRVLDR
Sbjct: 11 TTSTQKLLWVQQRIDVVVVLEGPSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGGKFIILAPHNLASYFTGDGGLAVLEKKLLPPDAVLYNFEQIPCRWPRESTNLVEPGTRDRSLVSARTLHIYGSYTLWDYSEENAERLLDMGIHTDVVPLGFSSKLRSSSLLVAGGRVLKEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFGAAFDTVSARSKIVLNLNAFEGATTTTIESRSNGSSPGDLCDNGEWKMPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFAPPERLAETCQFYLHRPGLRMSIAESGRRLFEQHLEADILRRPVGRHLAAHRVLDR 377
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: D7FJ49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ49_ECTSI) HSP 1 Score: 385 bits (988), Expect = 6.230e-131 Identity = 195/211 (92.42%), Postives = 202/211 (95.73%), Query Frame = 2
Query: 677 MGIHADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFTPPERLAETCQFYLQRPGSRMSIAESGRRLFEQHLEADILRRPVGRHLAAHRVLDR 1309
M IHADLVPLGF+SKLRSSSLLVAGG VLEE+E+EDIDVLFIGMETPTRQRTIRRLRDAGI VFHPNSE VDLF AAFDTVSARSKIVLNLNAFEGATTT+IESRSNGSSPGDLC NGEWK+PRLARLLANGRFIVSEMSGSDSERAKFSGGVVF PPERLAETCQFYLQRP RMSIA+SGRRLFEQHLEADILRRPVGRHLAAHRVL+R
Sbjct: 1 MSIHADLVPLGFASKLRSSSLLVAGGHVLEEQEHEDIDVLFIGMETPTRQRTIRRLRDAGIMVFHPNSERVDLFGAAFDTVSARSKIVLNLNAFEGATTTAIESRSNGSSPGDLCDNGEWKMPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFAPPERLAETCQFYLQRPELRMSIAQSGRRLFEQHLEADILRRPVGRHLAAHRVLNR 211
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: A0A8J2S2T6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S2T6_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.530e-34 Identity = 121/384 (31.51%), Postives = 183/384 (47.66%), Query Frame = 2
Query: 197 DLQESSATQKPLSVQQR---IDVVVVPEGPSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGSKFIILAPHNLASYF--TGDGGLAVFEKQLLPHDA--VLYNFEQIPCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYT-------------LWDYSEENARRLLDMGIHADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMS-GSDSERAKFSGGVVFTPPERLAETCQFYLQRPGSRMSIAESGRRLFEQHLEADILRRPVGRHL 1285
D+QE + PLS + I VVV +G D +T F +I+ V GL+ LG +R+ +C + F + I LA HNL + L + LP + V +NFE +P +T + E ++ V + +GS+ +WDYS N L + + VPLG+S+ R L R+++++ DI +LF G T R+RT++ LR + +FH N++ F A D + + IVL+L AF+ T EWK+PRLA+LLA G F+VSE + G + + A ++ GVVFT + L ET Q+Y++RP R +A G+ LFE +LR PV R L
Sbjct: 228 DVQEEDPPETPLSCAETCPDIAVVVYHQGEDDTSTRGTFFEISRAVVRGLRALGLRARLTHCVDASQGCAFRDHERRIHLATHNLQVFLDLATMAPLMLKRGDFLPRFSMDVAFNFEYVPNVI--NATEVAEASSQKTDHVQ----NAHGSFATAVALATLKKAARVWDYSLANVEPLSTL-TRVEHVPLGWSTAWRPHRDL---SRLIQDK---DIPILFYGTLTSRRKRTLQMLRSNDLPIFHANAQTDGTFAPALDALILSAAIVLDLKAFDSTKTR------------------EWKMPRLAKLLAAGAFVVSEGACGVEHQCAAYAEGVVFT--DDLVETLQYYMERPVERARVAARGKALFEARTFGRVLRGPVERWL 578
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: F0Y7U6_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7U6_AURAN) HSP 1 Score: 144 bits (364), Expect = 1.380e-33 Identity = 124/364 (34.07%), Postives = 168/364 (46.15%), Query Frame = 2
Query: 254 VVVVPEGPSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHC-FA-KGSKFIILAPHNLASYFTGDGGLAVF--EKQLLPHD--AVLYNFEQIPCRWPRESTNLP------EPGTRDK--------SLVSARTLHIYG-SYTLWDYSEENARRLLDMGIHADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDA--GITVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMSGSDSERAK-FSGGVVFTPPERLAETCQFYLQRPGSRMSIAESGRRLFEQHLEADILRRPV 1273
VVV +GPSD +T+ F DI+ V GL+ LG +R C L TD C FA G + + L HNL +Y D V ++ L +D AVLYNFE +P P + L + G R S +A TL + + T+WDYS N L +GI A VPLG + R L A + + VLF G T R T+ +R G V H N+ F AA D A + +VLNL AF GD + EWK+PRLA+L AN +F++SE + + + ++GG+VF L +Y RP R +IA+ G LF A +LR PV
Sbjct: 481 VVVYQQGPSDTSTSGTFADISAAVVAGLRGLGLAARAETCVAL-TDGCRFALDGEQEVALGAHNLQAYVDVDADAPVVLGPRRPLFYDEAAVLYNFEYVP---PDDLETLAAGMAQLQNGARGDGGLTNAAGSFATAATLEVLRRANTVWDYSASNVPSLAALGISATHVPLGDAPPWRIRPALAAA---VSANASSSLPVLFYGTLTRHRAATLAAIRAGPNGQPVVHANAATDGTFGAALDAQIAAADVVLNLRAF-----------------GD--RDDEWKMPRLAKLFANRKFVISEGTCDPGGQCEAYAGGLVFAERRDLKAAVAYYRDRPAERAAIADRGHALFATRSMATVLRGPV 818
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: A0A8J2X102_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X102_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.950e-21 Identity = 88/285 (30.88%), Postives = 136/285 (47.72%), Query Frame = 2
Query: 398 FAKGSKFIILAPHNLASYF--TGDGGLAVFEKQLLPHDA--VLYNFEQIPCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYT-------------LWDYSEENARRLLDMGIHADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMS-GSDSERAKFSGGVVFTPPERLAETCQFYLQRPGS 1198
F + I LA HNL + L + LP + V +NFE +P +T + E ++ V + +GS+ +WDYS N L + + VPLG+S+ R L R+++++ DI +LF G T R+RT++ LR + +FH N++ F A D + + IVL+L AF+ T EWK+PRLA+LLA G F+VSE + G + + A ++ GVVFT + L ET Q+Y++RPG+
Sbjct: 248 FRDHERRIHLATHNLQVFLDLATMAPLMLKRGDFLPRFSMDVAFNFEYVPNVI--NATEVAEASSQKTDHVQ----NAHGSFATAVALATLKKAARVWDYSLANVEPLSTL-TRVEHVPLGWSTAWRPHRDL---SRLIQDK---DIPILFYGTLTSRRKRTLQMLRSNDLPIFHANAQTDGTFAPALDALILSAAIVLDLKAFDSTKTR------------------EWKMPRLAKLLAAGAFVVSEGACGVEHQCAAYAEGVVFT--DDLVETLQYYMERPGA 499
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: A0A0S7XIL0_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium DG_8 TaxID=1703397 RepID=A0A0S7XIL0_9DELT) HSP 1 Score: 94.0 bits (232), Expect = 5.440e-18 Identity = 72/265 (27.17%), Postives = 118/265 (44.53%), Query Frame = 2
Query: 494 LPHDAVLYNFEQIPCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYTLWDYSEENARRLLDMGI-HADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFDA---AFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFTPPERLAETCQFYLQRPGSRMSIAESGRRLFEQHLEADILRRPVG 1276
+P + +L+N EQI D +S L+I SY +WDYS N ++L ++GI + +G+ +L + EDIDVL G R ++ L++ G+ V + LF A D ARSK++LN++ +E +++ R++ LLAN +F++SE+ D F+ G+VF+ + L E C YL+ SR IAE G L Q ++ L++ +G
Sbjct: 66 IPKNLILFNLEQIQL---------------DSPWMSQSYLNILRSYPVWDYSYRNIQKLKNLGISNVTHCGIGYEPELTKIP-----------QSEEDIDVLLYGSLNDRRMEILKELKNNGLKV-------IGLFGAYGGRRDNYIARSKVILNIHYYEARV---------------------FEIVRVSYLLANKKFVISEVGQDDDLEKSFAEGMVFSTYKELVEKCIEYLKEERSRKEIAEKGFNLMRQRPQSVFLKQALG 276
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: A0A420Z5D4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Woesebacteria bacterium TaxID=2026804 RepID=A0A420Z5D4_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 7.930e-14 Identity = 70/260 (26.92%), Postives = 113/260 (43.46%), Query Frame = 2
Query: 494 LPHDAVLYNFEQIPCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYTLWDYSEENARRLLDMGIH-ADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFDA---AFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFTPPERLAETCQFYLQRPGSRMSIAESGRRLFEQHLEADIL 1261
+P + +L+N EQI D +S L++ SY +WDYS N L +GI+ +G+ +L R+ + E DIDVL G R + ++ L+++G+ V V LF D ARSKI+LN++ +E +++ R++ LLAN +F++SE+ D + G+VF+ + L E C YL+ R IAE G L +Q ++ L
Sbjct: 66 IPKNLILFNLEQIQL---------------DSPWMSQPYLNMLKSYPVWDYSCRNILELKKLGINNVTHCGIGYEPELT---------RIPQVEE--DIDVLLYGSLNERRIKILKELKNSGVKV-------VALFGTYGEERDEYIARSKIILNVHYYEARV---------------------FEIVRVSYLLANKKFVISEIGQDDGLEKPYDEGMVFSTYKELVEKCMEYLKAEAPRKEIAEKGFNLIKQRPQSVFL 271
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: A0A2A7X5K1_9BACI (DNA-binding protein n=1 Tax=Bacillus wiedmannii TaxID=1890302 RepID=A0A2A7X5K1_9BACI) HSP 1 Score: 81.3 bits (199), Expect = 3.950e-13 Identity = 74/314 (23.57%), Postives = 136/314 (43.31%), Query Frame = 2
Query: 287 TTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGSKFIILAPHNLASYFTGDGGLAVFEKQLLPHDAVLYNFEQI--PCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYTLWDYSEENARRLLDMGIHADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAG--ITVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFTPPERLAETCQFYLQRPGSRMSIAE 1216
TT VF D+ ++ L+ + ++ NL+T+ +K ++ N + Y T + P A++YNFEQ+ C W + + L+I +WDYS N L G+ + + K+ + L ++ + +EDIDVLFIG RQ I++L++ + + N+ ++ + + ARSKI+LN++ + G + PR+++++AN +FI+SE+S + E G++F P + T Y Q+P R+ +A+
Sbjct: 116 TTYKVFIDVVRALKWNLEQ--QDNTVIISENLLTN------AKNTVIFGANNSIYNTSSINI--------PKKAIIYNFEQLYDDCHWD-----------------NPQYLNILKDREIWDYSLHNINWLQKKGLGKSIKHM----KINYAPTLEFKSKIFPD--FEDIDVLFIGSINDRRQLIIKQLKELAPHLNIIFTNN----IWGIPRNELIARSKIILNIHYYL---------------------TGILETPRISQIVANNKFIISELSNPNDELDW--PGIIFVPYNEIVNTVLHYSQKPNERIKLAK 363
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: J8KAI3_BACCE (Uncharacterized protein n=3 Tax=Bacillus cereus group TaxID=86661 RepID=J8KAI3_BACCE) HSP 1 Score: 79.7 bits (195), Expect = 4.630e-13 Identity = 81/318 (25.47%), Postives = 143/318 (44.97%), Query Frame = 2
Query: 299 VFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGSKFIILAPHNLASYFTGDGGLAVFEKQLLPHDAVLYNFEQI--PCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYTLWDYSEENARRLLDMGIHADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGI---TVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFEGATTTSIESRSNGSSPGDLCHNGEWKLPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFTPPERLAETCQFYLQRPGSRMSIAESGRRLFE 1237
+F DIA+ ++ L+ G+ +V +LVT+ +K ++ N + Y ++ +P +A++YNFEQ+ CRW + R L+I +WDYS N L G+ + + K++ + L + ++EDID+LFIG RQ +L+ +F N G+D + + ARSKI+LN++ + G + PR+++++AN +FI+SE+S +D ++A + G +VF P L T Y Q+P M++A+ F+
Sbjct: 18 IFIDIAKALKWNLEQQGNT--VVISEDLVTN------AKNTVIFGANESIY----NNFSIH----IPKEAIIYNFEQLYNGCRWD-----------------NPRYLNILKDREIWDYSVSNMNWLQKKGLGKLIKHM----KIKYAPTLEF--KFENFPDFEDIDILFIGSMNERRQFIFDQLQKVAPHLNIIFRNNVWGIDK-----NELIARSKIILNIHYYL---------------------TGILETPRISQVVANDKFIISELSNAD-DQADWPG-IVFVPYNELVNTVLHYSQKPIECMNLAKKSYEYFK 268
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Match: A0A7W8FYF6_9GAMM (Uncharacterized protein n=1 Tax=Chiayiivirga flava TaxID=659595 RepID=A0A7W8FYF6_9GAMM) HSP 1 Score: 69.3 bits (168), Expect = 1.600e-9 Identity = 64/230 (27.83%), Postives = 95/230 (41.30%), Query Frame = 2
Query: 275 PSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGSKFIILAPHNLASYFTGDGGLAVFEKQLLPHDAVLYNFEQIPCRWPRESTNLPEPGTRDKSLVSARTLHIYGSYTLWDYSEENARRLLDMGIH-ADLVPLGFSSKLRSSSLLVAGGRVLEEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFDAAFDTVSARSKIVLNLNAFE 961
P + + F ++A+T+Q GLQ LGH + +V+ + + I+L + L Y +P DAV YN EQI + + A L + + WDYS NA L G H A ++PLG++ L + EDIDVLF G R +R L G+ V H + A D AR++IVLN++ F+
Sbjct: 10 PFNYPHSAAFDEVAQTLQHGLQALGHDA-------VVSSRLDNRRRRHIVLGANLLQKY-----------PAPVPDDAVFYNLEQI---------------SPESVWFRAGLLDVLRTRPCWDYSHGNAAALAAAGAHVAAVLPLGYAPALTRIA-----------PADEDIDVLFYGSLNERRAVVLRELTRRGLRVKHL----FGAYGAERDAWIARARIVLNMHYFD 191 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14264.3310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14264.3310.1 >prot_Ecto-sp13_S_contig14264.3310.1 ID=prot_Ecto-sp13_S_contig14264.3310.1|Name=mRNA_Ecto-sp13_S_contig14264.3310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp MRYLGRLWMLVALVLLAPTVTGQKRQHRDRRRDLQESSATQKPLSVQQRIback to top mRNA from alignment at Ecto-sp13_S_contig14264:1752..4016- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14264.3310.1 ID=mRNA_Ecto-sp13_S_contig14264.3310.1|Name=mRNA_Ecto-sp13_S_contig14264.3310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2265bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14264:1752..4016- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14264:1752..4016- >mRNA_Ecto-sp13_S_contig14264.3310.1 ID=mRNA_Ecto-sp13_S_contig14264.3310.1|Name=mRNA_Ecto-sp13_S_contig14264.3310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14264:1752..4016- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |