prot_Ecto-sp13_S_contig14262.3307.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14262.3307.1
Unique Nameprot_Ecto-sp13_S_contig14262.3307.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14262.3307.1 vs. uniprot
Match: A0A6H5K0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H2_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 6.100e-38
Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0 
Query:    1 MLDVQADAMRLNADVQSDFVMFIQTFMDRGAFPVWELESILRINTAVLAVVGVQRALLTLGHAVATVVDYELYGSYYR 78
            MLDVQADAMRLNADVQSDFVMFIQ FMDRGAFPVWELESILRINTAVLAV+GVQRALLTLGHAVATVVD+E YGSY R
Sbjct:  479 MLDVQADAMRLNADVQSDFVMFIQAFMDRGAFPVWELESILRINTAVLAVMGVQRALLTLGHAVATVVDHEFYGSYSR 556
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BLAST of mRNA_Ecto-sp13_S_contig14262.3307.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 4.110e-37
Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0 
Query:    1 MLDVQADAMRLNADVQSDFVMFIQTFMDRGAFPVWELESILRINTAVLAVVGVQRALLTLGHAVATVVDYELYGSYYR 78
            MLDVQADAMRLNADVQSDFVMFIQ FMDRGAFPVWELESILRI+TAVLAV+GVQRALLTLGHAVATVVD E YGSYYR
Sbjct: 1149 MLDVQADAMRLNADVQSDFVMFIQAFMDRGAFPVWELESILRISTAVLAVMGVQRALLTLGHAVATVVDRESYGSYYR 1226
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14262.3307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0H2_9PHAE6.100e-3893.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD61_ECTSI4.110e-3793.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14262contigEcto-sp13_S_contig14262:2395..3075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14262.3307.1mRNA_Ecto-sp13_S_contig14262.3307.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14262 2387..3582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14262.3307.1 ID=prot_Ecto-sp13_S_contig14262.3307.1|Name=mRNA_Ecto-sp13_S_contig14262.3307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
MLDVQADAMRLNADVQSDFVMFIQTFMDRGAFPVWELESILRINTAVLAV
VGVQRALLTLGHAVATVVDYELYGSYYR*
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