mRNA_Ecto-sp13_S_contig14261.3305.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: D8LE90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE90_ECTSI) HSP 1 Score: 761 bits (1966), Expect = 9.280e-275 Identity = 386/460 (83.91%), Postives = 400/460 (86.96%), Query Frame = 1
Query: 1 MEGGGVVFLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDPNNVLRNNVGGSGPQSQSQRHTQDGRTPSGRIGNQDGDRAYSVADRADLQHTVGQTQPGLYGRCSRCARPQGFVPASVAPIGDEHDSAVGPWHASGAEKMDGISSGPKDLWDGGSNAGYPRAGEATSHPSNGFGTSREHHPDVRASWQPAAGPAGGGGRSGSRWGAFASNRATEVLEGHRGRNQEALQDPNFVTCLETASAKRRASPTPGKRERKRGPPSSSDSPLEDGAPRSRYRRTLEYQQQAASNNGAAADTGDARGRGGPQWQQNGVTMRRDWPCSSSSAPDASLCGGPMTYMQDGGWEDGRRDPCGTNRGRVGAVDQEWSRPAHSAKGHGGMSREGSVFTSEWNGMGRRSSTALTTPNSSTPGGTGVVGTTRDSSSSSRWSKFVR 1380
MEGGG+VFLALRCFSCQ FQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGED NNVLRNNVGG GPQSQS+RH QDGR S RIGNQDGDRAYS DRA LQHTVG QPGLYGR S ARP GFVPA VAPIGDEHD AVG WH SGAEKMDG+SSGP+DLWDG SNAGYPRAGEAT HPS+GFGTSREHHPDVRASWQP A PAGGGGRSGSRWGAFASNRATEVLEG RG NQEALQDP+FVTCLETA A+RRASPTPGKR RKRGPPSSSDSP GA R RYRRTLEYQQQAASN GA AD+GDA G G PQ QQN VTMRRDWPCSSSSAP A+ G M YM+DGGWEDGRRDPCGT+R RVG V+QEWSRPAHS GHGGMSR+GS+F SEWNG GRRSSTA PNSS PGGTGVVG T SSSSRWSKFVR
Sbjct: 1 MEGGGIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSDRIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAPIGDEHDPAVGSWHVSGAEKMDGVSSGPQDLWDGRSNAGYPRAGEATRHPSDGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRRGPNQEALQDPDFVTCLETAPARRRASPTPGKRGRKRGPPSSSDSPTGHGASRLRYRRTLEYQQQAASNYGATADSGDAHGGGDPQRQQNNVTMRRDWPCSSSSAPGANQDGDAMAYMRDGGWEDGRRDPCGTSRVRVGVVEQEWSRPAHSTSGHGGMSRDGSMFPSEWNGRGRRSSTASAPPNSSAPGGTGVVGATSGPSSSSRWSKFVR 460
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: A0A6H5KK09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK09_9PHAE) HSP 1 Score: 701 bits (1808), Expect = 2.830e-251 Identity = 358/422 (84.83%), Postives = 373/422 (88.39%), Query Frame = 1
Query: 115 QSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDPNNVLRNNVGGSGPQSQSQRHTQDGRTPSGRIGNQDGDRAYSVADRADLQHTVGQTQPGLYGRCSRCARPQGFVPASVAPIGDEHDSAVGPWHASGAEKMDGISSGPKDLWDGGSNAGYPRAGEATSHPSNGFGTSREHHPDVRASWQPAAGPAGGGGRSGSRWGAFASNRATEVLEGHRGRNQEALQDPNFVTCLETASAKRRASPTPGKRERKRGPPSSSDSPLEDGAPRSRYRRTLEYQQQAASNNGAAADTGDARGRGGPQWQQNGVTMRRDWPCSSSSAPDASLCGGPMTYMQDGGWEDGRRDPCGTNRGRVGAVDQEWSRPAHSAKGHGGMSREGSVFTSEWNGMGRRSSTALTTPNSSTPGGTGVVGTTRDSSSSSRWSKFVR 1380
QSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDPNNV+ NNVGGS PQSQSQ HTQDG+ PSGRIGN D DRAYSV DRA LQHT+GQ QPGLY R ARP+GFVPASVAPIGDEHD AVG WH+ G EKMDG+SSG +DLWDG SNAGYPRA EATSHPS+GFGTSREHHP+VRA+WQP A PAG GGR+GSRWGAFASNRATEVL+G G NQEALQDPNFVTCLETA AKRRASPTPGKR RK GPPSSSDSPLEDGA RSRYRRTLEYQQQAASNNGAAAD GDARGRGGPQWQQ+GVTMRR W CSSSSA ASL GGPMTY +DGGWEDGRRDPCGTNRGRVGAVDQEWSRPAHSA G+GGMSREGSV TSE NG GRRSSTA T PNSS PGGTGVVG TR SSSSRWSKF R
Sbjct: 4 QSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDPNNVVCNNVGGSEPQSQSQPHTQDGQNPSGRIGNHDDDRAYSVGDRASLQHTLGQAQPGLYVRNGSWARPEGFVPASVAPIGDEHDPAVGSWHSWGTEKMDGVSSGTQDLWDGDSNAGYPRAREATSHPSDGFGTSREHHPNVRATWQPVAEPAGAGGRNGSRWGAFASNRATEVLDGRLGPNQEALQDPNFVTCLETAPAKRRASPTPGKRRRKCGPPSSSDSPLEDGASRSRYRRTLEYQQQAASNNGAAADAGDARGRGGPQWQQDGVTMRRAWSCSSSSASGASLYGGPMTYTRDGGWEDGRRDPCGTNRGRVGAVDQEWSRPAHSASGYGGMSREGSVLTSELNGRGRRSSTASTPPNSSAPGGTGVVGATRGPSSSSRWSKFAR 425
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: A0A3B3T2R6_9TELE (Uncharacterized protein n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T2R6_9TELE) HSP 1 Score: 69.3 bits (168), Expect = 4.360e-11 Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 13 GVVFLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 198
G F LRCFSCQ FQV+Q KS KW C+MCGE QS++KV+G+G A D R V LNA G
Sbjct: 4 GQEFNVLRCFSCQTFQVHQVKKSKKWNCKMCGEKQSLLKVYGQGSGA-DCRRHVQKLNALRG 64
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: UPI001BB2BCC7 (MRN complex-interacting protein-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2BCC7) HSP 1 Score: 67.8 bits (164), Expect = 1.690e-10 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 22 FLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 198
F +RCF+C VFQV+Q K KW+C+MCGE QS+ KV+G+G KD R LV +LN AG
Sbjct: 5 FHVIRCFACLVFQVHQVKKKPKWQCKMCGEKQSVRKVYGKGA-GKDCRLLVQSLNMTAG 62
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: A0A3B4BBA7_9GOBI (Uncharacterized protein n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BBA7_9GOBI) HSP 1 Score: 68.2 bits (165), Expect = 1.890e-10 Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 22 FLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDPNNVLRNNVG 240
F LRCFSC+VFQV Q K KW C++CG+ QS++K +GRG A D R V LNAA G + V +NVG
Sbjct: 7 FHVLRCFSCEVFQVQQVKKVNKWSCKLCGQKQSVLKEFGRGSGA-DCRRHVQKLNAARGAKMEDEEVEWSNVG 78
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: UPI0015B2AA0F (MRN complex-interacting protein isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B2AA0F) HSP 1 Score: 70.1 bits (170), Expect = 5.130e-10 Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 22 FLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 198
F LRCFSCQ FQV+Q KS KW C+MCGE QS+VKV+GRG A D R V LN+ G
Sbjct: 5 FHVLRCFSCQTFQVHQVKKSKKWSCKMCGEKQSLVKVYGRGSGA-DCRRHVQKLNSLRG 62
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: A0A8C9R4G2_SCLFO (MRN complex interacting protein n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9R4G2_SCLFO) HSP 1 Score: 69.7 bits (169), Expect = 2.640e-9 Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 13 GVVFLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 198
G F LRCFSCQ FQV Q KS KW C+MCGE QS++KV+G+G A D R V LNA G
Sbjct: 2 GQEFHVLRCFSCQTFQVQQVKKSKKWSCKMCGEKQSLIKVYGQGSGA-DCRRHVQKLNALRG 62
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: A0A667Z022_9TELE (Uncharacterized protein n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Z022_9TELE) HSP 1 Score: 65.5 bits (158), Expect = 3.180e-9 Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 22 FLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 198
F LRCFSCQ FQV Q KS +W+C++CGE Q+++K +GRG A D R V LNA G
Sbjct: 56 FQVLRCFSCQTFQVQQVKKSSRWRCKLCGEKQTLLKEFGRGSGA-DCRRHVQKLNAMRG 113
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: UPI000CD61316 (MRN complex-interacting protein isoform X1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD61316) HSP 1 Score: 69.3 bits (168), Expect = 3.400e-9 Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 13 GVVFLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 198
G F LRCFSCQ FQV+Q KS KW C+MCGE QS++KV+G+G A D R V LNA G
Sbjct: 2 GQEFNVLRCFSCQTFQVHQVKKSKKWNCKMCGEKQSLLKVYGQGSGA-DCRRHVQKLNALRG 62
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Match: UPI000D72EB99 (uncharacterized protein LOC112561384 isoform X1 n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72EB99) HSP 1 Score: 68.6 bits (166), Expect = 7.710e-9 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 22 FLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 198
F L+C+SCQ +QV+Q KS KWKC++CGE QS++KV+GRG KD R V LN G
Sbjct: 4 FHVLQCYSCQTYQVHQEAKSKKWKCKLCGEQQSVIKVFGRGS-GKDCRQHVQKLNMLRG 61 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14261.3305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14261.3305.1 >prot_Ecto-sp13_S_contig14261.3305.1 ID=prot_Ecto-sp13_S_contig14261.3305.1|Name=mRNA_Ecto-sp13_S_contig14261.3305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=461bp MEGGGVVFLALRCFSCQVFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHback to top mRNA from alignment at Ecto-sp13_S_contig14261:1343..4288+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14261.3305.1 ID=mRNA_Ecto-sp13_S_contig14261.3305.1|Name=mRNA_Ecto-sp13_S_contig14261.3305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2946bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14261:1343..4288+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14261:1343..4288+ >mRNA_Ecto-sp13_S_contig14261.3305.1 ID=mRNA_Ecto-sp13_S_contig14261.3305.1|Name=mRNA_Ecto-sp13_S_contig14261.3305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1383bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14261:1343..4288+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |