prot_Ecto-sp13_S_contig1426.3304.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1426.3304.1
Unique Nameprot_Ecto-sp13_S_contig1426.3304.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length832
Homology
BLAST of mRNA_Ecto-sp13_S_contig1426.3304.1 vs. uniprot
Match: A0A6H5KQ27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ27_9PHAE)

HSP 1 Score: 657 bits (1694), Expect = 1.320e-224
Identity = 498/619 (80.45%), Postives = 508/619 (82.07%), Query Frame = 0
Query:  225 DVSKITAEVRESRAGQRHAELWLEKSLAEVDAVHAVLAYERSA--AXXXXXXXXXXXXXXXXXXXAQYPVDHSMHTPDPTPKLRPHSHPPSPAYGGGSDANGSRCSPEVAVGPTAQTPTPESPTSILAGLXXXXXXXXXXXXXXXXXXXLPAAFPATPL---TSPIRSRDDSGVRTPDLDVTRPELFSTTRLRSRVGGRGLGRLTEDGDAATDYNYGDLAVTTVTRRGGGHQSEVLSPPTPTVLFGELAGDGGSTTW----GXXXXXXXXXXXXXXXXXXXXXXXVDSIHGSAAAEVTATVKGTNNSIISSNKVREDVAASLLSMLRLETSKRKQAEARAAELEAXXXXXXXXXXXXXXXXXXXXXXXLSSPPLEVDKGNLGGGRVGVG--DGGVVRPCDEQAHGSGGGAPMAGNDGGQQQQKQPYPDWFAHYARVGQEKQEAEILRLVRDAREKIVSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSNPSTEVASLIRQFDEKLTQSVEENTQLRVFCSHLEGLLASNPAPSAGGGARAGAALPTGGCGSQVDFGMVGCCSADVANGGAAIKCRQSPPFSLRRDPPSGGKARKAAAV-AVAEPFQDLW 831
            DVSKITAEVRESRAGQRHAELWLEKSLAEVDAVHAVLAYERSA  AXXXXXXXXXXXXXXXXXXXA YPVDHSMHTPDPTPKLRPHSHPP PAYGGG  A GS CSPEVAVGPT QTPTPESPTSI+AGL XXXXXXXXXXXXXXXXXX             TSPIRSR DSGV TPDLDVTRPELFS TRLRSRVGGRGLG +TED DAA+DYNY DLAVTTVTRRGGGHQSEVLSPPTPTVLFGELAGD GSTTW     XXXXXXXXXXXXXXXXXXXXXXX                           KVREDVAASLLSMLRLETSKRKQ          XXXXXXXXXXXXXXXXXXXXXXX SSPPL+VDKG LGGGRVGVG  +GGVVRPCDEQAHGSGGGAPMAGND GQQQ KQPYPDWFAHYARVGQEKQEAEILRLVRDAREK+VSG XXXXXXX        XXXXXXXXXXXXXXXXXX   TSNPSTEVASLIRQFDEKL++S+EENTQLRVFCSHLEGLLASNPAPS GGG RAGAA+PTGGCG Q DFG VGCCSADVANGG AIKCR SPP SLRRDP             AVAEPFQDLW
Sbjct:   71 DVSKITAEVRESRAGQRHAELWLEKSLAEVDAVHAVLAYERSAVAAXXXXXXXXXXXXXXXXXXXAPYPVDHSMHTPDPTPKLRPHSHPPFPAYGGGGGATGSMCSPEVAVGPTVQTPTPESPTSIVAGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPIRSRHDSGVETPDLDVTRPELFSATRLRSRVGGRGLGMMTEDVDAASDYNYDDLAVTTVTRRGGGHQSEVLSPPTPTVLFGELAGDSGSTTWRVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVREDVAASLLSMLRLETSKRKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPPLDVDKGILGGGRVGVGVFNGGVVRPCDEQAHGSGGGAPMAGNDDGQQQPKQPYPDWFAHYARVGQEKQEAEILRLVRDAREKMVSGXXXXXXXXGCGGKPASXXXXXXXXXXXXXXXXXXGCGTSNPSTEVASLIRQFDEKLSRSLEENTQLRVFCSHLEGLLASNPAPSTGGGVRAGAAMPTGGCGRQADFG-VGCCSADVANGGTAIKCRPSPPLSLRRDPXXXXXXXXXXXXXAVAEPFQDLW 688          
BLAST of mRNA_Ecto-sp13_S_contig1426.3304.1 vs. uniprot
Match: D8LT88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT88_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 9.420e-112
Identity = 332/653 (50.84%), Postives = 337/653 (51.61%), Query Frame = 0
Query:   37 MEAKVAAVRAXXXXXXXXXXXXXEATRGEKEQIDSELIFLKASSRTERLDWNKERKALNRKVAETDARAREAADGIASAEEFTALQKGLASREATIRSLREELDAKETQMDKLRLEAACGSTVQGDLDTLMVRTATLEHALAKERDARKTAEQEAETRSGEVRVLETRLKAALEAAARAEDSAAASIEDVSKITAEVRESRAGQRHAELWLEKSLAEVDAVHAVLAYERSAAXXXXXXXXXXXXXXXXXXX---------AQYPVDHSMHTPDPTPKLRPHSHPPSPAYGGGSDANGSRCSPEVAVGPTAQTPTPESPTSILAGLXXXXXXXXXXXXXXXXXXX-----LPAAFPATPLTSPIRSRDDSGVRTPDLDVTRPELFSTTRLRSRVGGRGLGRLTEDGDAATDYNYGDLAVTTVTRRGGGHQSEVLSPPTPTVLFGELAGDGGSTTWGXXXXXXXXXXXXXXXXXXXXXXXVDSIHGSAAAEVTATVKGTNNSIISSNKVREDVAASLLSMLRLETSKRKQAEARAAELEAXXXXXXXXXXXXXXXXXXXXXXXLSSPPLEVDKGNLGGGRVGVG--DGGVVRPCDEQAHGSGGGAPMAGNDGGQQQQKQPYPDWFAHYARVGQEKQEAEILRLVRDAREKIVSGG 673
            MEAKVAAVRA             EATRGEKEQIDSELIFLKASSRTERLDWNKERKALNRKVAE DARA                                                                                          GEVRVLETRLKAALEAAARAEDSAAASIEDVSKITAEVRESRAGQRHAELWLEKSLAEVDAVHAVLAYERSAAXXXXXXXXXXXXXXXXXXX         A Y VDHSM TPDPTPKLRPHSHPPSPAYGGGS ANGS C+PEVAVGPTAQTPTPESPTSILAGL  XXXXXXXXXXXXXXXXX     LPAA P          RD +     D   T P        R R    G GR                            Q+E                                        XXXXXXX      +  AE TA                                                                       SP L VDKGNLGGGRVGVG  DGGVVRPCDEQAHGS GG P AGND GQQQQKQPYPDWFAHYARVGQEKQEAEILRLVRDAREK+VSGG
Sbjct:    1 MEAKVAAVRADYDAKVAELMADLEATRGEKEQIDSELIFLKASSRTERLDWNKERKALNRKVAEADARA--------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------XGEVRVLETRLKAALEAAARAEDSAAASIEDVSKITAEVRESRAGQRHAELWLEKSLAEVDAVHAVLAYERSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPYLVDHSMQTPDPTPKLRPHSHPPSPAYGGGSGANGSMCNPEVAVGPTAQTPTPESPTSILAGLGGXXXXXXXXXXXXXXXXXXXXXPLPAAIP----------RDAA-----DFADTEPG-------RQRRADAGPGR---------------------------DQAEXXXXXXXXXXXXXXX-------------------------XXXXXXXXXXXXXTIEAEETAPF---------------------------------------------------------------------SPLLGVDKGNLGGGRVGVGVGDGGVVRPCDEQAHGSAGGVPTAGNDDGQQQQKQPYPDWFAHYARVGQEKQEAEILRLVRDAREKMVSGG 448          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1426.3304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQ27_9PHAE1.320e-22480.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT88_ECTSI9.420e-11250.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availableCOILSCoilCoilcoord: 125..152
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableCOILSCoilCoilcoord: 541..568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1426contigEcto-sp13_S_contig1426:8336..15137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1426.3304.1mRNA_Ecto-sp13_S_contig1426.3304.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1426 7911..15289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1426.3304.1 ID=prot_Ecto-sp13_S_contig1426.3304.1|Name=mRNA_Ecto-sp13_S_contig1426.3304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=832bp
METPVVPSTDGSKAWQHPPYELISPQCKIAAAHNAQMEAKVAAVRADYDA
KVAELMADLEATRGEKEQIDSELIFLKASSRTERLDWNKERKALNRKVAE
TDARAREAADGIASAEEFTALQKGLASREATIRSLREELDAKETQMDKLR
LEAACGSTVQGDLDTLMVRTATLEHALAKERDARKTAEQEAETRSGEVRV
LETRLKAALEAAARAEDSAAASIEDVSKITAEVRESRAGQRHAELWLEKS
LAEVDAVHAVLAYERSAAAAAAAAASHDAPAQQQQQQAQYPVDHSMHTPD
PTPKLRPHSHPPSPAYGGGSDANGSRCSPEVAVGPTAQTPTPESPTSILA
GLGGGDGGPGAAAAAAAAAPPLPAAFPATPLTSPIRSRDDSGVRTPDLDV
TRPELFSTTRLRSRVGGRGLGRLTEDGDAATDYNYGDLAVTTVTRRGGGH
QSEVLSPPTPTVLFGELAGDGGSTTWGVSSTAAAAARPPHVSSGGDDGGG
VDSIHGSAAAEVTATVKGTNNSIISSNKVREDVAASLLSMLRLETSKRKQ
AEARAAELEAASAAATAAAAAATTEEEETAAATLSSPPLEVDKGNLGGGR
VGVGDGGVVRPCDEQAHGSGGGAPMAGNDGGQQQQKQPYPDWFAHYARVG
QEKQEAEILRLVRDAREKIVSGGGGGGGQGCGGKPAPAGGGGPLGVESRS
SSSSGSGCGTSNPSTEVASLIRQFDEKLTQSVEENTQLRVFCSHLEGLLA
SNPAPSAGGGARAGAALPTGGCGSQVDFGMVGCCSADVANGGAAIKCRQS
PPFSLRRDPPSGGKARKAAAVAVAEPFQDLW*
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