prot_Ecto-sp13_S_contig1425.3299.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1425.3299.1
Unique Nameprot_Ecto-sp13_S_contig1425.3299.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length295
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1425.3299.1 vs. uniprot
Match: A0A6H5JND6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND6_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 1.320e-131
Identity = 230/250 (92.00%), Postives = 234/250 (93.60%), Query Frame = 0 
Query:   46 MPPRRSIKKKGRLQEAEAASKSIKTIYDNGHAADHLDEEEDVGSGCPIVEEPSTREAQTEYVERIIEEVEAKAREWCDAIMDENASNIRMQKRTRDRVKNKINRKFRHMKLSDLCHMSGNDFNAALLMAVPPEERAVLLAEAGEDADEXXXXEENMPTAVKGRNPPRMVPATPRGGGRPAGSRVTRSAVKGARTSSRMSVAAEPLPVEAGAVAQXXXXXXXXXXXXXXXXXXXXGGGPGRDVYPLSTSIE 295
            MPPRR I KKGRLQEAEAASKSIKTIYD+GHAADHLDEEED GS CPIVEEPSTREAQTEYVERIIEEVEAKAREWCDAIMDENASNIRMQKRTRDRVKNKINRKFRHMKLSDLCHMSGND+NAALLMAVPPEERAVLLAE GED DE    EENMPTAVKGRNPPRMVPATP+GGGRPAGSRVTRSAVKGARTSSR+SV AEPLPVE GAVAQXXXXXXXXXXXXXXXXXXXX   PGRDV PLSTSIE
Sbjct:    1 MPPRRCINKKGRLQEAEAASKSIKTIYDDGHAADHLDEEEDFGSTCPIVEEPSTREAQTEYVERIIEEVEAKAREWCDAIMDENASNIRMQKRTRDRVKNKINRKFRHMKLSDLCHMSGNDYNAALLMAVPPEERAVLLAEVGEDTDEEENDEENMPTAVKGRNPPRMVPATPKGGGRPAGSRVTRSAVKGARTSSRLSVPAEPLPVEVGAVAQXXXXXXXXXXXXXXXXXXXXXEAPGRDVCPLSTSIE 250
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1425.3299.1 vs. uniprot
Match: D8LJB0_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB0_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 5.790e-119
Identity = 223/250 (89.20%), Postives = 227/250 (90.80%), Query Frame = 0 
Query:   46 MPPRRSIKKKGRLQEAEAASKSIKTIYDNGHAADHLDEEEDVGSGCPIVEEPSTREAQTEYVERIIEEVEAKAREWCDAIMDENASNIRMQKRTRDRVKNKINRKFRHMKLSDLCHMSGNDFNAALLMAVPPEERAVLLAEAGEDADEXXXXEENMPTAVKGRNPPRMVPATPRGGGRPAGSRVTRSAVKGARTSSRMSVAAEPLPVEAGAVAQXXXXXXXXXXXXXXXXXXXXGGGPGRDVYPLSTSIE 295
            MP RRSIKKKGRLQEAEAASKSIKTIYD+GHAADHLDEEEDVGS CPIVEEPSTREAQTEYVERIIEEVEAKAREWCDAIMDENASNIRMQKRTRDRVKNKINRKFRHMKLSDLCHMSGND+NAALLMAVP                 XXXX  NMPTAVKGRNPPRMVPATP+GGGRPAGSRVTRSAVKGAR SSR+SVAAEPLPVEAGAVAQXXXXXXXXXXXXXXXXXXXXGG PGRDVYPLSTSIE
Sbjct:    1 MPARRSIKKKGRLQEAEAASKSIKTIYDDGHAADHLDEEEDVGSTCPIVEEPSTREAQTEYVERIIEEVEAKAREWCDAIMDENASNIRMQKRTRDRVKNKINRKFRHMKLSDLCHMSGNDYNAALLMAVPXXXXXXXXXXXXXXXXXXXXXXXNMPTAVKGRNPPRMVPATPKGGGRPAGSRVTRSAVKGARISSRLSVAAEPLPVEAGAVAQXXXXXXXXXXXXXXXXXXXXGGAPGRDVYPLSTSIE 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1425.3299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JND6_9PHAE1.320e-13192.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJB0_ECTSI5.790e-11989.20FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1425contigEcto-sp13_S_contig1425:13972..16964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1425.3299.1mRNA_Ecto-sp13_S_contig1425.3299.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1425 13972..16964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1425.3299.1 ID=prot_Ecto-sp13_S_contig1425.3299.1|Name=mRNA_Ecto-sp13_S_contig1425.3299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
VLESLVPPAGTLPFLLARHPCHVRFARSLSGLSRESWHPPRKRIIMPPRR
SIKKKGRLQEAEAASKSIKTIYDNGHAADHLDEEEDVGSGCPIVEEPSTR
EAQTEYVERIIEEVEAKAREWCDAIMDENASNIRMQKRTRDRVKNKINRK
FRHMKLSDLCHMSGNDFNAALLMAVPPEERAVLLAEAGEDADEDEDDEEN
MPTAVKGRNPPRMVPATPRGGGRPAGSRVTRSAVKGARTSSRMSVAAEPL
PVEAGAVAQTPTGRARAVGGRAMRSAVKGGGGPGRDVYPLSTSIE
back to top