prot_Ecto-sp13_S_contig1425.3297.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1425.3297.1
Unique Nameprot_Ecto-sp13_S_contig1425.3297.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: D8LJA8_ECTSI (Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759 RepID=D8LJA8_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.130e-120
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA 190
            VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA
Sbjct:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA 190          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A835ZKQ0_9STRA (Ribosomal protein L19 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKQ0_9STRA)

HSP 1 Score: 267 bits (683), Expect = 7.320e-89
Identity = 141/172 (81.98%), Postives = 154/172 (89.53%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 173
            VSLKLQKRLAASVLKCGK KIWLDPNEVNEISLANSRQNIRKL KDGL+I+ P V+HSRARV  R+EAK+KGRHTGPGKR GTANARLPFKL+W RRMR+LRRMLRKYR+AKK+DKHLYH+LY+ CKGNQFKNKRVLMEAIHK K ET R +AL EQAEARK KA  K +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKIWLDPNEVNEISLANSRQNIRKLKKDGLIIKKPTVIHSRARVLARNEAKRKGRHTGPGKRHGTANARLPFKLLWMRRMRVLRRMLRKYRDAKKVDKHLYHKLYMLCKGNQFKNKRVLMEAIHKMKAETLRERALVEQAEARKAKASAKKDRK 173          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A7S2V357_9STRA (Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V357_9STRA)

HSP 1 Score: 258 bits (659), Expect = 4.460e-85
Identity = 139/176 (78.98%), Postives = 155/176 (88.07%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRK 177
            VSL+LQKRLAASVLKCGK KIWLDPNE+NEIS+ANSRQNIRKLVKDGLVIR PQVVHSRARV  R+EAK KGRHTG GKR GTANARLPFKLIW RR R+LRR+LRKYR+AKKIDKHLYH+LY+  KGNQFKNK+VLMEAIH+ K E AR KAL +QAEARK +A+ K  RK ++K
Sbjct:    2 VSLRLQKRLAASVLKCGKRKIWLDPNEINEISMANSRQNIRKLVKDGLVIRKPQVVHSRARVVERNEAKAKGRHTGYGKRHGTANARLPFKLIWMRRARVLRRLLRKYRDAKKIDKHLYHDLYMRSKGNQFKNKKVLMEAIHRMKAEKAREKALADQAEARKTRARMKAARKAEKK 177          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: K3X7E5_GLOUD (Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X7E5_GLOUD)

HSP 1 Score: 256 bits (653), Expect = 3.410e-84
Identity = 137/180 (76.11%), Postives = 154/180 (85.56%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAA 181
            VSLKLQKRLAASVLKCGK K+WLDPNE  E++LANSRQNIRKLVKDG +I+ P+V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E AR K LKEQ+EARK KAK   +RK  +  AAA
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESTELALANSRQNIRKLVKDGFIIKKPEVIHSRARFQKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERAREKTLKEQSEARKEKAKNARDRKAQKAVAAA 181          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: M4C2P1_HYAAE (Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=2759 RepID=M4C2P1_HYAAE)

HSP 1 Score: 254 bits (650), Expect = 7.210e-84
Identity = 136/172 (79.07%), Postives = 149/172 (86.63%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 173
            VSLKLQKRLAASVLKCGK KIWLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSRAR   R+EAK+KGRHTG GKR GTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ++ARK KAK   ERK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKIWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRHGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSDARKEKAKSARERK 173          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A484E6K8_BRELC (Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6K8_BRELC)

HSP 1 Score: 253 bits (646), Expect = 2.830e-83
Identity = 134/172 (77.91%), Postives = 150/172 (87.21%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 173
            VSLKLQKRLAASVLKCGK K+WLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YH+LY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KA+   +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHDLYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKARLARDRK 173          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A6V1T3Z5_HETAK (Ribosomal protein L19 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T3Z5_HETAK)

HSP 1 Score: 254 bits (648), Expect = 3.250e-83
Identity = 134/172 (77.91%), Postives = 152/172 (88.37%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 173
            VSLKLQKRLAASVLKCGK KIWLDPNE+NEIS ANSRQNIRKL KDGL+++ PQVVHSRARV   +EAK KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+L+KYR+AKK+DKHLYHELY+  KGNQFKNKRVLME+IHK K E AR KAL +QAEA+K +A+ K +RK
Sbjct:   21 VSLKLQKRLAASVLKCGKRKIWLDPNEINEISSANSRQNIRKLFKDGLLVKKPQVVHSRARVLAYNEAKAKGRHTGYGKRRGTANARLPFKIIWMRRMRVLRRLLKKYRDAKKLDKHLYHELYMRSKGNQFKNKRVLMESIHKMKAEKARAKALVDQAEAKKTRARLKKQRK 192          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A067BLM6_SAPPC (Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLM6_SAPPC)

HSP 1 Score: 252 bits (644), Expect = 5.160e-83
Identity = 133/172 (77.33%), Postives = 150/172 (87.21%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 173
            VSLKLQKRLAASVLKCGK K+WLDPNE  EI+LANSRQNIRKLVKDG VIR PQV+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYR+AKKID+H+YH+LY+  KGNQFKNKRVLME IHK K E  R KALK+Q+EARK KA+   +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARKEKARNARDRK 173          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A7S2G695_9STRA (Ribosomal protein L19 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G695_9STRA)

HSP 1 Score: 253 bits (645), Expect = 5.630e-83
Identity = 135/176 (76.70%), Postives = 152/176 (86.36%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRK 177
            VSLKLQKRLAASVLKCG+ K+WLDPNE NEIS+ANSRQNIRKL+KDG V + PQVVHSR+RV    +AK+KGRHTG GKR+GTA+ARLP K++W RRMR+LRR+LRKYREAKKID+HLYHELY+ CKGNQFKNKRVLMEAIHK K   AR KAL EQA+ARK KAK K ERK  RK
Sbjct:    2 VSLKLQKRLAASVLKCGRKKVWLDPNESNEISMANSRQNIRKLIKDGFVFKKPQVVHSRSRVMRHLDAKRKGRHTGYGKRKGTADARLPLKVLWMRRMRVLRRLLRKYREAKKIDRHLYHELYMRCKGNQFKNKRVLMEAIHKMKAGKAREKALMEQADARKNKAKAKTERKMKRK 177          
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A2D4BRP0_PYTIN (Ribosomal protein L19 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRP0_PYTIN)

HSP 1 Score: 255 bits (652), Expect = 4.670e-82
Identity = 136/173 (78.61%), Postives = 150/173 (86.71%), Query Frame = 0
Query:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKE 174
            VSLKLQKRLAASVLKCGK K+WLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSR+R   R+EAK+KGRHTG GKRRGTANARLP K+IW RRMR+LRR+LRKYR+AKKID+HLYHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KAK   ERKE
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRSRFQRRNEAKRKGRHTGIGKRRGTANARLPLKVIWMRRMRVLRRLLRKYRDAKKIDRHLYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKAKASRERKE 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA8_ECTSI1.130e-120100.00Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759... [more]
A0A835ZKQ0_9STRA7.320e-8981.98Ribosomal protein L19 n=2 Tax=Tribonema minus TaxI... [more]
A0A7S2V357_9STRA4.460e-8578.98Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica ... [more]
K3X7E5_GLOUD3.410e-8476.11Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=478... [more]
M4C2P1_HYAAE7.210e-8479.07Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=275... [more]
A0A484E6K8_BRELC2.830e-8377.91Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxI... [more]
A0A6V1T3Z5_HETAK3.250e-8377.91Ribosomal protein L19 n=2 Tax=Heterosigma akashiwo... [more]
A0A067BLM6_SAPPC5.160e-8377.33Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxI... [more]
A0A7S2G695_9STRA5.630e-8376.70Ribosomal protein L19 n=2 Tax=Dictyocha speculum T... [more]
A0A2D4BRP0_PYTIN4.670e-8278.61Ribosomal protein L19 n=1 Tax=Pythium insidiosum T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..184
NoneNo IPR availableGENE3D1.10.1200.240coord: 57..185
e-value: 8.2E-50
score: 170.1
IPR000196Ribosomal protein L19/L19eSMARTSM01416Ribosomal_L19e_2coord: 3..146
e-value: 2.0E-92
score: 323.0
IPR000196Ribosomal protein L19/L19ePFAMPF01280Ribosomal_L19ecoord: 4..146
e-value: 1.3E-61
score: 206.9
IPR000196Ribosomal protein L19/L19eHAMAPMF_01475Ribosomal_L19ecoord: 3..149
score: 19.732
IPR015972Ribosomal protein L19/L19e, domain 1GENE3D1.10.1650.10coord: 2..55
e-value: 2.9E-29
score: 102.5
IPR03954760S ribosomal protein L19PANTHERPTHR1072260S RIBOSOMAL PROTEIN L19coord: 2..186
IPR023638Ribosomal protein L19/L19e conserved sitePROSITEPS00526RIBOSOMAL_L19Ecoord: 7..26
IPR035970Ribosomal protein L19/L19e superfamilySUPERFAMILY48140Ribosomal protein L19 (L19e)coord: 3..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1425contigEcto-sp13_S_contig1425:6402..9162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1425.3297.1mRNA_Ecto-sp13_S_contig1425.3297.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1425 6402..9162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1425.3297.1 ID=prot_Ecto-sp13_S_contig1425.3297.1|Name=mRNA_Ecto-sp13_S_contig1425.3297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
QVSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLV
IRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMR
ILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETA
RIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000196Ribosomal_L19/L19e
IPR015972Ribosomal_L19/L19e_dom1
IPR039547RPL19
IPR023638Ribosomal_L19/L19e_CS
IPR03597060S_ribosomal_L19/L19e_sf