mRNA_Ecto-sp13_S_contig1425.3297.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1425.3297.1
Unique NamemRNA_Ecto-sp13_S_contig1425.3297.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: D8LJA8_ECTSI (Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759 RepID=D8LJA8_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.130e-120
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA 570
            VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA
Sbjct:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA 190
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A835ZKQ0_9STRA (Ribosomal protein L19 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKQ0_9STRA)

HSP 1 Score: 267 bits (683), Expect = 7.320e-89
Identity = 141/172 (81.98%), Postives = 154/172 (89.53%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 519
            VSLKLQKRLAASVLKCGK KIWLDPNEVNEISLANSRQNIRKL KDGL+I+ P V+HSRARV  R+EAK+KGRHTGPGKR GTANARLPFKL+W RRMR+LRRMLRKYR+AKK+DKHLYH+LY+ CKGNQFKNKRVLMEAIHK K ET R +AL EQAEARK KA  K +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKIWLDPNEVNEISLANSRQNIRKLKKDGLIIKKPTVIHSRARVLARNEAKRKGRHTGPGKRHGTANARLPFKLLWMRRMRVLRRMLRKYRDAKKVDKHLYHKLYMLCKGNQFKNKRVLMEAIHKMKAETLRERALVEQAEARKAKASAKKDRK 173
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A7S2V357_9STRA (Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V357_9STRA)

HSP 1 Score: 258 bits (659), Expect = 4.460e-85
Identity = 139/176 (78.98%), Postives = 155/176 (88.07%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRK 531
            VSL+LQKRLAASVLKCGK KIWLDPNE+NEIS+ANSRQNIRKLVKDGLVIR PQVVHSRARV  R+EAK KGRHTG GKR GTANARLPFKLIW RR R+LRR+LRKYR+AKKIDKHLYH+LY+  KGNQFKNK+VLMEAIH+ K E AR KAL +QAEARK +A+ K  RK ++K
Sbjct:    2 VSLRLQKRLAASVLKCGKRKIWLDPNEINEISMANSRQNIRKLVKDGLVIRKPQVVHSRARVVERNEAKAKGRHTGYGKRHGTANARLPFKLIWMRRARVLRRLLRKYRDAKKIDKHLYHDLYMRSKGNQFKNKKVLMEAIHRMKAEKAREKALADQAEARKTRARMKAARKAEKK 177
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: K3X7E5_GLOUD (Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X7E5_GLOUD)

HSP 1 Score: 256 bits (653), Expect = 3.410e-84
Identity = 137/180 (76.11%), Postives = 154/180 (85.56%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAA 543
            VSLKLQKRLAASVLKCGK K+WLDPNE  E++LANSRQNIRKLVKDG +I+ P+V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E AR K LKEQ+EARK KAK   +RK  +  AAA
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESTELALANSRQNIRKLVKDGFIIKKPEVIHSRARFQKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERAREKTLKEQSEARKEKAKNARDRKAQKAVAAA 181
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: M4C2P1_HYAAE (Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=2759 RepID=M4C2P1_HYAAE)

HSP 1 Score: 254 bits (650), Expect = 7.210e-84
Identity = 136/172 (79.07%), Postives = 149/172 (86.63%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 519
            VSLKLQKRLAASVLKCGK KIWLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSRAR   R+EAK+KGRHTG GKR GTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ++ARK KAK   ERK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKIWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRHGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSDARKEKAKSARERK 173
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A484E6K8_BRELC (Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6K8_BRELC)

HSP 1 Score: 253 bits (646), Expect = 2.830e-83
Identity = 134/172 (77.91%), Postives = 150/172 (87.21%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 519
            VSLKLQKRLAASVLKCGK K+WLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YH+LY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KA+   +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHDLYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKARLARDRK 173
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A6V1T3Z5_HETAK (Ribosomal protein L19 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T3Z5_HETAK)

HSP 1 Score: 254 bits (648), Expect = 3.250e-83
Identity = 134/172 (77.91%), Postives = 152/172 (88.37%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 519
            VSLKLQKRLAASVLKCGK KIWLDPNE+NEIS ANSRQNIRKL KDGL+++ PQVVHSRARV   +EAK KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+L+KYR+AKK+DKHLYHELY+  KGNQFKNKRVLME+IHK K E AR KAL +QAEA+K +A+ K +RK
Sbjct:   21 VSLKLQKRLAASVLKCGKRKIWLDPNEINEISSANSRQNIRKLFKDGLLVKKPQVVHSRARVLAYNEAKAKGRHTGYGKRRGTANARLPFKIIWMRRMRVLRRLLKKYRDAKKLDKHLYHELYMRSKGNQFKNKRVLMESIHKMKAEKARAKALVDQAEAKKTRARLKKQRK 192
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A067BLM6_SAPPC (Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLM6_SAPPC)

HSP 1 Score: 252 bits (644), Expect = 5.160e-83
Identity = 133/172 (77.33%), Postives = 150/172 (87.21%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 519
            VSLKLQKRLAASVLKCGK K+WLDPNE  EI+LANSRQNIRKLVKDG VIR PQV+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYR+AKKID+H+YH+LY+  KGNQFKNKRVLME IHK K E  R KALK+Q+EARK KA+   +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARKEKARNARDRK 173
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A7S2G695_9STRA (Ribosomal protein L19 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G695_9STRA)

HSP 1 Score: 253 bits (645), Expect = 5.630e-83
Identity = 135/176 (76.70%), Postives = 152/176 (86.36%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRK 531
            VSLKLQKRLAASVLKCG+ K+WLDPNE NEIS+ANSRQNIRKL+KDG V + PQVVHSR+RV    +AK+KGRHTG GKR+GTA+ARLP K++W RRMR+LRR+LRKYREAKKID+HLYHELY+ CKGNQFKNKRVLMEAIHK K   AR KAL EQA+ARK KAK K ERK  RK
Sbjct:    2 VSLKLQKRLAASVLKCGRKKVWLDPNESNEISMANSRQNIRKLIKDGFVFKKPQVVHSRSRVMRHLDAKRKGRHTGYGKRKGTADARLPLKVLWMRRMRVLRRLLRKYREAKKIDRHLYHELYMRCKGNQFKNKRVLMEAIHKMKAGKAREKALMEQADARKNKAKAKTERKMKRK 177
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BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Match: A0A2D4BRP0_PYTIN (Ribosomal protein L19 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRP0_PYTIN)

HSP 1 Score: 255 bits (652), Expect = 4.670e-82
Identity = 136/173 (78.61%), Postives = 150/173 (86.71%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKE 522
            VSLKLQKRLAASVLKCGK K+WLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSR+R   R+EAK+KGRHTG GKRRGTANARLP K+IW RRMR+LRR+LRKYR+AKKID+HLYHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KAK   ERKE
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRSRFQRRNEAKRKGRHTGIGKRRGTANARLPLKVIWMRRMRVLRRLLRKYRDAKKIDRHLYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKAKASRERKE 174
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1425.3297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA8_ECTSI1.130e-120100.00Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759... [more]
A0A835ZKQ0_9STRA7.320e-8981.98Ribosomal protein L19 n=2 Tax=Tribonema minus TaxI... [more]
A0A7S2V357_9STRA4.460e-8578.98Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica ... [more]
K3X7E5_GLOUD3.410e-8476.11Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=478... [more]
M4C2P1_HYAAE7.210e-8479.07Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=275... [more]
A0A484E6K8_BRELC2.830e-8377.91Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxI... [more]
A0A6V1T3Z5_HETAK3.250e-8377.91Ribosomal protein L19 n=2 Tax=Heterosigma akashiwo... [more]
A0A067BLM6_SAPPC5.160e-8377.33Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxI... [more]
A0A7S2G695_9STRA5.630e-8376.70Ribosomal protein L19 n=2 Tax=Dictyocha speculum T... [more]
A0A2D4BRP0_PYTIN4.670e-8278.61Ribosomal protein L19 n=1 Tax=Pythium insidiosum T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1425contigEcto-sp13_S_contig1425:6402..9162 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score350.9
Seed ortholog evalue3.7e-94
Seed eggNOG ortholog2880.D8LJA8
Preferred nameRPL19
Model size573
KEGG rclassRC00002,RC00017
KEGG koko:K00844,ko:K02885,ko:K14780
KEGG ReactionR00299,R00760,R00867,R01326,R01600,R01786,R01961,R03920
KEGG Pathwayko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko03010,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map03010,map04066,map04910,map04930,map04973,map05230
KEGG ModuleM00001,M00177,M00179,M00549
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0001889,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010259,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030097,GO:0030684,GO:0030687,GO:0031099,GO:0031100,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048534,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0061008,GO:0065007,GO:0070180,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0097421,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904,GO:1990932
Exons4
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG2147@1,KOG1696@2759
Ec32 ortholog descriptionRibosomal protein L19/L19e domain
Ec32 orthologEc-02_005390.1
EC2.7.1.1,3.6.4.13
Cds size573
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462761.6463718-CDS-Ecto-sp13_S_contig1425:6401..65301681462761.6463718-CDS-Ecto-sp13_S_contig1425:6401..6530Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1425 6402..6530 +
1681462761.6593022-CDS-Ecto-sp13_S_contig1425:7179..72621681462761.6593022-CDS-Ecto-sp13_S_contig1425:7179..7262Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1425 7180..7262 +
1681462761.6781445-CDS-Ecto-sp13_S_contig1425:8404..85601681462761.6781445-CDS-Ecto-sp13_S_contig1425:8404..8560Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1425 8405..8560 +
1681462761.6882153-CDS-Ecto-sp13_S_contig1425:8957..91621681462761.6882153-CDS-Ecto-sp13_S_contig1425:8957..9162Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1425 8958..9162 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1425.3297.1prot_Ecto-sp13_S_contig1425.3297.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1425 6402..9162 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1425.3297.1

>prot_Ecto-sp13_S_contig1425.3297.1 ID=prot_Ecto-sp13_S_contig1425.3297.1|Name=mRNA_Ecto-sp13_S_contig1425.3297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
QVSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLV
IRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMR
ILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETA
RIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA*
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mRNA from alignment at Ecto-sp13_S_contig1425:6402..9162+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1425.3297.1 ID=mRNA_Ecto-sp13_S_contig1425.3297.1|Name=mRNA_Ecto-sp13_S_contig1425.3297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2761bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1425:6402..9162+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGTCGCTAAAGCTCCAAAAGCGGCTTGCCGCATCCGTACTCAAGTG
CGGAAAGGGCAAGATCTGGCTCGACCCCAACGAGGTGAACGAGATTTCCC
TCGCCAACTCTCGCCAGAACATCCGGAAGGTGAGAAAATATCACAAGGCT
CTTTTCAGCACAAGGCCCTCGGCTGCTGTGCAGCAGTTGCAGGGTAGACA
GGCAGCGACAGGCGTTGGCCCCCCAATCGTGTACGATCTGGTTCTGCAAA
TGAACGAGGCATTGTAGCTACAATTTAGAGAGGTAAGTTTTGTGCTCGAT
TGGACCCGATCGGTCGAAGGTTTAAGCCATCGCTGTTCAACCTTTTCGCG
AAAGCAGGGGAAGACCTCTGTAAAAAGTAAAAAGCAATCTATAGCGTACC
TCAATTTGCAGCGCGTTTTTCCCGCAACGTTTCCGGGACTGTTCCTTGTG
TCCGTTGTTTCATGTTGGTGCCGACTGAAGTGAATCGTGCTCATTCAGTA
CAACCGCTGTCCACCCACGTCGAAATTTCTTTCTCAATCCAGGACTTACG
GCGCACGGGTGCGCGCGATGTTCGTTTGAAATGGGCTTTTTTTGGTCCCG
AACCTCTCTAGCTCTGTAGCCCCCGAGTTGCAACAGGTCCACACTCTTTG
AGTGTTCCACCACTATTGTGCACCTCCCGGCCCGGCCTTGACCAAGAGTG
TCACGACGTTATGTTGCCTCCCGCGTTGATTGAACGTTTTACCCCTCCCC
TTTTCCTACGCCCCTGCTGCGCCCGCAGTTGGTTAAGGATGGATTGGTCA
TCCGGTTGCCGCAGGTTGTGCACTCCCGCGCCCGAGTCAACTTGCGCCAC
GAGGCCAAGAAGTGAGTCGATTTGGCTCAGTGTCTCGTTTCGTCAAACCA
CTCTAGTGCCATCTTCGGGTTGAATGAAGCCCTGGCAGCCCTTTTACGGC
GTTCCTCAAGCGTGGGTCTTATGGTGTCGTGACAAACCAATTTATGTCAT
AAATTGGACGGCGACTTGGGCTCCTTGCGCAGAGGTGGTGCCAAAAGGAT
ATCAGCGTCGAGATGTCGCTTTAGTACCTAGGGTACAGAGAACTAGTGAG
ACCGGGACGCAACAAGTGGTTCGTCCGCTCACGCCAGCAGTGGGAATTGG
GAAGATCGGGTGGCCAGCCGCCCCACTGTAGTTGGCTTTCATGTTCCGGC
AGCTGGGAAGGGCGCTCTGACAAATTTTTCGGCAATGCCTTCGTAACGAA
AACATTTTCGACGGTCTCCGCACCTTCTCCGCAACCCACTTCGCACATAA
TCGGATTTCGATCTTGTGCCTTCAGGCTGAAAACAGGCATCCAACAGGTT
TGGCTGAAATAGTCTCGCAGCACTCGGTTTCTAACCGTTTCACAGGAGAT
CAACTCTTTCTGAAGTAGCGAAACATGCCGATTGCAGCGATCGGAACTTC
ATACATATTACGCGACGGGCGCACGCACATTGATGAACGTCATCCTCACC
CGATGAACCCTTAATGAAACCGCACTGCAAAGCATTTGTGGGTGCAGGTT
GCAGCTGCATTCGTGTTGAGGCGTGCGCAGCGAGCTGAACCGCTCAATGA
TGCCCGTGGTCTTTTGCTGTATCGACGAGAATGGCTTTCGACCTATTGTT
CCGTCATGGGTTGGCGAAAAATCCCCTCTGCCGGCTAGTCAGCGGCGTTT
CGTCGCGAAAGGTTCTTGTCACCTTTCAAAAACTCTGATGGGTGTGCATC
TATCTACGAGCAAGTGGTGGTTTATGCAAGGCAGTTGAGGTCAACAGAAA
CACTTCAACCCCCAACCGGTATGCTGGAGGAACGCAACGCCCTCGCGTCC
TCTCATCTCTAAGTTTGACTCGTAAAAAGAGCAGTTTGGAGAGAGTTAAC
GCCTGGGAGGCCCTACATATCTTGCTCACCTATTAGTCCCACACATCCCA
CACACACCCGTGTACCCCATGAATGTGATGTCGAAATTGTCGTGTGAGCG
CAGGAAGGGCAGGCACACCGGCCCCGGTAAGCGCAGGGGTACCGCCAACG
CCCGGCTCCCCTTCAAGCTGATCTGGCAGCGCCGCATGCGTATCCTCCGC
CGTATGCTCCGCAAGTACCGCGAGGCGAAGAAGATCGACAAGCACCTCTA
CCACGAGCTGTGAGTGCCGCCATGAAGTGGCGCTCAGCTATTCCGTTGGC
TTTGACTTTCTGCCTGTAGAACCAAAGCGAGCTCCAACAGTTTTACGTAG
TCGCCTCGACGTAGCTCAAAGCTGCGACATCGTGTGTGCGCGTGCTTTAC
AAGCCGTTGCCGAGACGTGGGAAGTCGTGGCGAGAATGGCGGGAACGTTC
CGAGAGGGCGTCCTTTTCGCCGTGAATCGGGCGCTTCCAGCTTTCACATC
TCCAGTGATTCCCGAGTTGTGGTTATCCTTCTGTGCCATGAGGTTCGCTT
TGGGTGCAGTAGTTGCGTTGTACCGAGTAACCTTTCTCACTGCCCACTCG
CCTTTGCTATGTGTTTGTTACTTCTGCCCTGCGACGATGTCGCGCCGTTT
CAACAGCTACCTGGGATGCAAGGGTAACCAGTTCAAGAACAAGCGTGTTC
TGATGGAGGCGATCCACAAGAAGAAGGGCGAGACCGCGCGTATCAAGGCG
CTCAAGGAGCAGGCAGAGGCGCGCAAGCTCAAGGCGAAGCAGAAGAACGA
GCGCAAGGAGGACCGCAAGAAGGCGGCCGCCGAGGCTCGCGCTGCGGAAG
TCTCCGCCTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1425:6402..9162+

>mRNA_Ecto-sp13_S_contig1425.3297.1 ID=mRNA_Ecto-sp13_S_contig1425.3297.1|Name=mRNA_Ecto-sp13_S_contig1425.3297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1425:6402..9162+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGTCGCTAAAGCTCCAAAAGCGGCTTGCCGCATCCGTACTCAAGTG
CGGAAAGGGCAAGATCTGGCTCGACCCCAACGAGGTGAACGAGATTTCCC
TCGCCAACTCTCGCCAGAACATCCGGAAGTTGGTTAAGGATGGATTGGTC
ATCCGGTTGCCGCAGGTTGTGCACTCCCGCGCCCGAGTCAACTTGCGCCA
CGAGGCCAAGAAGAAGGGCAGGCACACCGGCCCCGGTAAGCGCAGGGGTA
CCGCCAACGCCCGGCTCCCCTTCAAGCTGATCTGGCAGCGCCGCATGCGT
ATCCTCCGCCGTATGCTCCGCAAGTACCGCGAGGCGAAGAAGATCGACAA
GCACCTCTACCACGAGCTCTACCTGGGATGCAAGGGTAACCAGTTCAAGA
ACAAGCGTGTTCTGATGGAGGCGATCCACAAGAAGAAGGGCGAGACCGCG
CGTATCAAGGCGCTCAAGGAGCAGGCAGAGGCGCGCAAGCTCAAGGCGAA
GCAGAAGAACGAGCGCAAGGAGGACCGCAAGAAGGCGGCCGCCGAGGCTC
GCGCTGCGGAAGTCTCCGCCTAA
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