mRNA_Ecto-sp13_S_contig1425.3295.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: D8LJA7_ECTSI (PITH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA7_ECTSI) HSP 1 Score: 342 bits (877), Expect = 8.790e-116 Identity = 191/195 (97.95%), Postives = 193/195 (98.97%), Query Frame = 1
Query: 1 MASCRHDHEEAGXXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKAR 585
M+SCRHDHEEAGXXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESAPGSGL+CLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISV GGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTK R
Sbjct: 1 MSSCRHDHEEAGXXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESAPGSGLNCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKFR 195
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: A0A835ZD87_9STRA (Galactose-binding domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD87_9STRA) HSP 1 Score: 242 bits (617), Expect = 2.100e-76 Identity = 130/195 (66.67%), Postives = 156/195 (80.00%), Query Frame = 1
Query: 1 MASCRHDHEEAGXXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKAR 585
M++CR +HE G XXXXXXXXXXX D EDP G SL+GLIDTTRVRCLNESA G L CLKPWDKRR+P+P LES + DPEL+I+VPFT+VVKI+AIS+ GG +G+APS MKV+VNRDDIDF A+D+P VQ++E+V DSGGVEVDYPTKL K QNVS +TLF N GAD+TV+++LGF+GEST R
Sbjct: 1 MSACRGEHEGCGGGHDHSXXXXXXXXXXX----DIEDPTGQSLYGLIDTTRVRCLNESAVGQVLQCLKPWDKRREPEPFLESNDGDPELLIHVPFTEVVKIKAISLLGGRDGAAPSKMKVWVNRDDIDFTSAEDVPGVQSMELVADSGGVEVDYPTKLHKFQNVSSVTLFFGDNHGADTTVLSFLGFRGESTNFR 191
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: W7UAE5_9STRA (PITH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAE5_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.720e-54 Identity = 90/170 (52.94%), Postives = 125/170 (73.53%), Query Frame = 1
Query: 100 DPEDPDGMSLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVAGG--GEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVR------DSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKAR 585
+ EDPDG S+F IDT++VRCLNE+ G+ L K ++KRR+P+PRL+S +DDPEL+++VPFT++VK+++I++ GG GEG+AP+ +K+FVNRDDIDFG +L A Q LE+V D GG+ DYP K+SK QNVS +T+F N G D T ++Y+GFKGE T R
Sbjct: 26 EAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGI--DYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVR 193
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: A0A7S2WKA7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WKA7_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.460e-53 Identity = 86/161 (53.42%), Postives = 114/161 (70.81%), Query Frame = 1
Query: 103 PEDPDGMSLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKAR 585
P+DPDG SLF IDT +V CLNE GSG +C+K ++ D + SEEDDPELI+++PFT VK+++ + GG G APS +K+F NR+D+DF AQ++P VQT E+ D G E+DYP + SK QN+S +T++V NFGADST IT+LG KGE T AR
Sbjct: 42 PDDPDGNSLFAYIDTEKVSCLNEREQGSGKNCIKSNVEKHDDTRFVISEEDDPELILHIPFTVAVKLKSFCIIGGANGEAPSKVKLFTNREDLDFEDAQEMPGVQTFELTEDFEG-EIDYPVRASKFQNISSLTIYVSENFGADSTKITFLGLKGEGTTAR 201
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: A0A2D4BK70_PYTIN (PITH domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK70_PYTIN) HSP 1 Score: 171 bits (432), Expect = 1.460e-48 Identity = 103/192 (53.65%), Postives = 134/192 (69.79%), Query Frame = 1
Query: 10 CRHDHEEAGXXXXXXXXXXXXXXXXXXXXXDPEDPDGMSLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKAR 585
C+ +H+E G XXXXXXXXXXXXXXXXX +PEDP G SLF IDT+++R LN + P KPW +R D L S EDDPELII++PFT+ V I++I +AGG +G+ P ++K+F+NR+DIDF A +LPA Q LE+V D G E+DYP ++ K Q VS +T+FV + G D T I Y+G KGES K R
Sbjct: 3 CQREHDECGGHXXXXXXXXXXXXXXXXX--EPEDPSGDSLFPYIDTSKLRALNAAEPDHVAHPFKPWHERSDRSRYLSSNEDDPELIIFIPFTEAVSIKSICIAGGEDGAHPKSVKLFINREDIDFSNASELPAQQRLELVEDLAG-EIDYPLQVRKFQGVSSLTIFVEDSTGGDDTKIYYIGLKGESKKWR 191
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: D8SUD4_SELML (PITH domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SUD4_SELML) HSP 1 Score: 160 bits (404), Expect = 1.320e-44 Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 1
Query: 124 SLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKARTEEDK*RGTPC*VVYATESDHRLMVGGRG 672
SL IDT +V LNE++PGS S K WD+R D LES EDDPELI+++PFT VKI++I V GG +GS+PS M+ F+NR+DIDF A++L VQ ++ + G E++YPT+ K Q V+++TL P+NFG ST I Y+G KGESTK + Y S+H++ GG G
Sbjct: 20 SLHAHIDTAKVWALNEASPGSSKSVFKSWDQRLDLSGSLESNEDDPELILFIPFTTDVKIKSICVVGGTDGSSPSKMRAFINREDIDFSDARELLPVQEWDLAENLHG-ELEYPTRYPKFQGVANLTLHFPTNFGGTSTRIHYVGLKGESTKVNRDAVT---NAVYEAYPNLSEHQIP-GGTG 197
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: A0A2P6TTM9_CHLSO (PITH domain-containing 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TTM9_CHLSO) HSP 1 Score: 159 bits (403), Expect = 2.500e-44 Identity = 75/161 (46.58%), Postives = 111/161 (68.94%), Query Frame = 1
Query: 124 SLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRD-----PQPRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKARTE 591
SL+ IDT VRCLNE+ GS KPW R++ P +L+SEEDDPEL+++VPF+ VK+ I+V GG +G++P+ +KVF+NRDD+DF A DLPAVQ +++ + GG +++YPT +K V + L+ PSN+GAD T I+++G +GE ++ R E
Sbjct: 24 SLYKHIDTQHVRCLNEAVEGSCRKVFKPWHLRQEAPSGEPGAQLDSEEDDPELLLHVPFSGSVKLTGITVVGGPDGASPAKLKVFINRDDLDFSAAADLPAVQEWDLLENYGG-QIEYPTHAAKFNGVHSLDLYFPSNYGADRTTISFIGLRGEFSERRRE 183
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: A0A7S4HIT9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HIT9_9EUKA) HSP 1 Score: 159 bits (403), Expect = 2.980e-44 Identity = 77/159 (48.43%), Postives = 104/159 (65.41%), Query Frame = 1
Query: 115 DGMSLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKARTE 591
+G SL+ I+T V CLNES PGS +C KP+ +R LES EDD +LI+Y+PFT VKI I V GG GS+PS +KV+ NRDDIDF +A DL +Q ++ D G EV+Y TK+++ QN++ +T++ P NFG D T I Y+G KGE + E
Sbjct: 32 EGWSLYQYINTESVTCLNESVPGSVKNCFKPYSERASTDKYLESNEDDEQLILYIPFTGAVKITNICVVGGSNGSSPSKLKVWKNRDDIDFSVADDLEPLQDFDLQEDPIG-EVNYTTKITRFQNITSLTMYFPENFGEDFTRIYYIGLKGEFKNVKRE 189
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: A0A803NFK5_CANSA (PITH domain-containing protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NFK5_CANSA) HSP 1 Score: 157 bits (398), Expect = 1.100e-43 Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 1
Query: 124 SLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQ-PRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKARTEEDK*RGTPC*VVYA---TESDHRLMV-GGRGVA 678
SL+ ID ++V LNE+ PGS S KPW+ R + LES E DPEL++++PFT VKI++ISV GG +G++PS M+ F+NR+ IDF AQ + AVQ E+ +S GV ++Y T+ SK Q+V +ITL P NFG D++ I Y+GFKGE+T+ + R +VY SDH+ GG G++
Sbjct: 19 SLYKHIDLSKVSALNEATPGSVKSVFKPWEHRLNSSGEHLESNEGDPELLVFIPFTSDVKIKSISVVGGADGTSPSKMRAFLNREGIDFSDAQSMQAVQEWELAENSQGV-LEYQTRYSKFQSVGNITLHFPENFGGDASQIHYIGFKGEATQLK------RDVVATIVYEITPNPSDHKTKADGGSGLS 201
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Match: A0A2C9U9X7_MANES (PITH domain-containing protein n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9U9X7_MANES) HSP 1 Score: 157 bits (397), Expect = 1.640e-43 Identity = 84/180 (46.67%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 124 SLFGLIDTTRVRCLNESAPGSGLSCLKPWDKRRDPQ-PRLESEEDDPELIIYVPFTQVVKIRAISVAGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSGGVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKARTEEDK*RGTPC*VVYATE---SDHR 651
SL+ ID ++V LNE+ PGS S K W++R D LES E DPEL++YVPFT VKI++IS+ GG +G++PS M+VF NRD IDF AQ + AVQ ++V + GV ++Y T+ +K QNV+ ITL P NFG D++ I Y+GFKGE+T+ + R +VY SDH+
Sbjct: 19 SLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLDSSGEHLESNEGDPELLVYVPFTSDVKIKSISIIGGADGTSPSKMRVFTNRDGIDFSDAQSMQAVQEWDLVENLQGV-LEYQTRYAKFQNVASITLHFPDNFGGDTSQIHYIGFKGEATQLK------RDVVATIVYELRPNPSDHK 191 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1425.3295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1425.3295.1 >prot_Ecto-sp13_S_contig1425.3295.1 ID=prot_Ecto-sp13_S_contig1425.3295.1|Name=mRNA_Ecto-sp13_S_contig1425.3295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp MASCRHDHEEAGGGGGGGDGHDHSHGHSHDHSHDPEDPDGMSLFGLIDTTback to top mRNA from alignment at Ecto-sp13_S_contig1425:889..3531- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1425.3295.1 ID=mRNA_Ecto-sp13_S_contig1425.3295.1|Name=mRNA_Ecto-sp13_S_contig1425.3295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2643bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1425:889..3531- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1425:889..3531- >mRNA_Ecto-sp13_S_contig1425.3295.1 ID=mRNA_Ecto-sp13_S_contig1425.3295.1|Name=mRNA_Ecto-sp13_S_contig1425.3295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1425:889..3531- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |